BLASTX nr result

ID: Coptis21_contig00024904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024904
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265151.2| PREDICTED: probable inactive leucine-rich re...    91   2e-16
ref|XP_002514942.1| protein with unknown function [Ricinus commu...    84   2e-14
ref|XP_002312630.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-13
ref|XP_002315618.1| predicted protein [Populus trichocarpa] gi|2...    79   8e-13
ref|XP_004135515.1| PREDICTED: probable inactive leucine-rich re...    72   6e-11

>ref|XP_002265151.2| PREDICTED: probable inactive leucine-rich repeat receptor-like
           protein kinase At1g66830-like [Vitis vinifera]
          Length = 709

 Score = 90.9 bits (224), Expect(2) = 2e-16
 Identities = 42/69 (60%), Positives = 56/69 (81%)
 Frame = +1

Query: 259 NPTSTSALSSDGLWLLALKSTMDASPEALAASSNRNEDDPTPCTWLGVSCMNLTGFTDPR 438
           NPT + +LSSDGL LL+LKS +D   +A +A S+ NEDDP PC W G+SCMN++GF+DPR
Sbjct: 16  NPTPSLSLSSDGLSLLSLKSAVD---DAASAFSDWNEDDPNPCRWTGISCMNVSGFSDPR 72

Query: 439 VVGVAVSGK 465
           VVG+A+SG+
Sbjct: 73  VVGIAISGR 81



 Score = 21.2 bits (43), Expect(2) = 2e-16
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 545 GYIPSELG 568
           GYIPSELG
Sbjct: 85  GYIPSELG 92


>ref|XP_002514942.1| protein with unknown function [Ricinus communis]
           gi|223545993|gb|EEF47496.1| protein with unknown
           function [Ricinus communis]
          Length = 810

 Score = 84.3 bits (207), Expect(2) = 2e-14
 Identities = 40/63 (63%), Positives = 49/63 (77%)
 Frame = +1

Query: 277 ALSSDGLWLLALKSTMDASPEALAASSNRNEDDPTPCTWLGVSCMNLTGFTDPRVVGVAV 456
           +LS DGL LL+LKS +D  P+     S+ NEDDPTPC W G+SCMN+TGF DPRVVG+A+
Sbjct: 29  SLSPDGLSLLSLKSAVD-QPDGDNPFSDWNEDDPTPCKWTGISCMNVTGFPDPRVVGIAI 87

Query: 457 SGK 465
           SGK
Sbjct: 88  SGK 90



 Score = 21.2 bits (43), Expect(2) = 2e-14
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 545 GYIPSELG 568
           GYIPSELG
Sbjct: 94  GYIPSELG 101


>ref|XP_002312630.1| predicted protein [Populus trichocarpa] gi|222852450|gb|EEE89997.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score = 81.3 bits (199), Expect(2) = 2e-13
 Identities = 39/69 (56%), Positives = 51/69 (73%)
 Frame = +1

Query: 259 NPTSTSALSSDGLWLLALKSTMDASPEALAASSNRNEDDPTPCTWLGVSCMNLTGFTDPR 438
           N   + +L+ DGL LL+LKS +D +  A +A S+ NEDDPTPC W G+SCMN+TG  DP 
Sbjct: 19  NTELSHSLTPDGLSLLSLKSAVDQT-SAGSAFSDWNEDDPTPCLWTGISCMNITGLPDPH 77

Query: 439 VVGVAVSGK 465
           VVG+A+SGK
Sbjct: 78  VVGIAISGK 86



 Score = 21.2 bits (43), Expect(2) = 2e-13
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 545 GYIPSELG 568
           GYIPSELG
Sbjct: 90  GYIPSELG 97


>ref|XP_002315618.1| predicted protein [Populus trichocarpa] gi|222864658|gb|EEF01789.1|
           predicted protein [Populus trichocarpa]
          Length = 532

 Score = 79.0 bits (193), Expect(2) = 8e-13
 Identities = 38/63 (60%), Positives = 49/63 (77%)
 Frame = +1

Query: 277 ALSSDGLWLLALKSTMDASPEALAASSNRNEDDPTPCTWLGVSCMNLTGFTDPRVVGVAV 456
           +L++DGL LL+LKS +D S  A +A S+ NEDD  PC W G+SCMN+TG  DPRVVG+A+
Sbjct: 40  SLTADGLSLLSLKSAVDQS-SAGSAFSDWNEDDQNPCHWTGISCMNITGLPDPRVVGIAI 98

Query: 457 SGK 465
           SGK
Sbjct: 99  SGK 101



 Score = 21.2 bits (43), Expect(2) = 8e-13
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 545 GYIPSELG 568
           GYIPSELG
Sbjct: 105 GYIPSELG 112


>ref|XP_004135515.1| PREDICTED: probable inactive leucine-rich repeat receptor-like
           protein kinase At1g66830-like [Cucumis sativus]
          Length = 712

 Score = 72.4 bits (176), Expect(2) = 6e-11
 Identities = 37/63 (58%), Positives = 49/63 (77%)
 Frame = +1

Query: 277 ALSSDGLWLLALKSTMDASPEALAASSNRNEDDPTPCTWLGVSCMNLTGFTDPRVVGVAV 456
           ALS DGL LL+LKS +D SP++ +  S+ NE+D TPC W G+SCMN++G  D RVVG+A+
Sbjct: 25  ALSPDGLSLLSLKSAVDQSPDS-SVFSDWNENDSTPCQWSGISCMNVSG--DSRVVGIAL 81

Query: 457 SGK 465
           SGK
Sbjct: 82  SGK 84



 Score = 21.2 bits (43), Expect(2) = 6e-11
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 545 GYIPSELG 568
           GYIPSELG
Sbjct: 88  GYIPSELG 95


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