BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024889
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ri...   225   6e-57
ref|XP_003546416.1| PREDICTED: nifU-like protein 3, chloroplasti...   219   4e-55
ref|XP_004148324.1| PREDICTED: nifU-like protein 3, chloroplasti...   218   9e-55
gb|ABK95780.1| unknown [Populus trichocarpa]                          218   9e-55
ref|XP_003594957.1| NifU-like protein [Medicago truncatula] gi|3...   217   2e-54

>ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
           gi|223528244|gb|EEF30298.1| Nitrogen fixation protein
           nifU, putative [Ricinus communis]
          Length = 220

 Score =  225 bits (574), Expect = 6e-57
 Identities = 117/152 (76%), Positives = 124/152 (81%)
 Frame = -1

Query: 458 IRHFFSSNTSHRRRKQAGVVIAPRCVLPLTEESVEKVLDEFGPGLMADGGNVALHEIDGL 279
           IRHF S   +   RK AG+V++P CVLPLTEE+VEKVLDE  PGLMADGGNV LHEIDGL
Sbjct: 41  IRHFSSIKLNRAPRKFAGLVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVVLHEIDGL 100

Query: 278 VVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEIMEVEQILDTETGXXXXXXXXXXXXX 99
           VVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEIM VEQILDTETG             
Sbjct: 101 VVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEIMAVEQILDTETGLELNDENVEKVLA 160

Query: 98  EIRPYLSGTGGGVLELVQIDGYVAKVRLSGPA 3
           EIRPYL+GTGGGVLELVQID Y+ KVRLSGPA
Sbjct: 161 EIRPYLAGTGGGVLELVQIDDYIVKVRLSGPA 192


>ref|XP_003546416.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Glycine max]
          Length = 236

 Score =  219 bits (558), Expect = 4e-55
 Identities = 113/153 (73%), Positives = 123/153 (80%)
 Frame = -1

Query: 461 SIRHFFSSNTSHRRRKQAGVVIAPRCVLPLTEESVEKVLDEFGPGLMADGGNVALHEIDG 282
           +I+ FF   + H  R +AG V++PRC LPLTEE+VEKVLDE  PGLMADGGNVALHEIDG
Sbjct: 56  NIKQFFGLISGHSPRNKAGGVVSPRCGLPLTEENVEKVLDEVRPGLMADGGNVALHEIDG 115

Query: 281 LVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEIMEVEQILDTETGXXXXXXXXXXXX 102
           LVVVLKLQGACGSCPSS MTLKMGIETRLRDKIPEI+EVEQI+DTETG            
Sbjct: 116 LVVVLKLQGACGSCPSSAMTLKMGIETRLRDKIPEILEVEQIMDTETGLELTEENVENVL 175

Query: 101 XEIRPYLSGTGGGVLELVQIDGYVAKVRLSGPA 3
            EIRPYL GTGGG+LELVQI  YV KVRLSGPA
Sbjct: 176 SEIRPYLVGTGGGILELVQIKDYVVKVRLSGPA 208


>ref|XP_004148324.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Cucumis
           sativus] gi|449510563|ref|XP_004163700.1| PREDICTED:
           nifU-like protein 3, chloroplastic-like [Cucumis
           sativus]
          Length = 227

 Score =  218 bits (555), Expect = 9e-55
 Identities = 110/151 (72%), Positives = 123/151 (81%)
 Frame = -1

Query: 455 RHFFSSNTSHRRRKQAGVVIAPRCVLPLTEESVEKVLDEFGPGLMADGGNVALHEIDGLV 276
           RHF   N+S  R +  G V++P CVLPLTEE+VEKVLDE  PGLMADGGNVALHEIDGLV
Sbjct: 49  RHFLRFNSSCTRIRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLV 108

Query: 275 VVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEIMEVEQILDTETGXXXXXXXXXXXXXE 96
           V+LKLQGACGSCPSSTMTLKMGIETRLRDKIPEI+EVEQI+DTETG             E
Sbjct: 109 VILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSE 168

Query: 95  IRPYLSGTGGGVLELVQIDGYVAKVRLSGPA 3
           IRPYL+GTGGG+LE+++I  YV KVRLSGPA
Sbjct: 169 IRPYLAGTGGGILEVIEIKDYVVKVRLSGPA 199


>gb|ABK95780.1| unknown [Populus trichocarpa]
          Length = 224

 Score =  218 bits (555), Expect = 9e-55
 Identities = 112/151 (74%), Positives = 122/151 (80%)
 Frame = -1

Query: 455 RHFFSSNTSHRRRKQAGVVIAPRCVLPLTEESVEKVLDEFGPGLMADGGNVALHEIDGLV 276
           RHF     +  R K  GVV++P CVLPLTEE+VEKVLDE  PGLM DGGNVALHEIDGLV
Sbjct: 46  RHFLHFKLNRGRMKCTGVVVSPSCVLPLTEENVEKVLDEVRPGLMRDGGNVALHEIDGLV 105

Query: 275 VVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEIMEVEQILDTETGXXXXXXXXXXXXXE 96
           VVLKLQGACGSCPSS+MTLKMGIET+LRDKIPEIM+VEQI+DTETG             E
Sbjct: 106 VVLKLQGACGSCPSSSMTLKMGIETKLRDKIPEIMDVEQIMDTETGLELNEENVEKALAE 165

Query: 95  IRPYLSGTGGGVLELVQIDGYVAKVRLSGPA 3
           IRPYL+GTGGGVLELVQI+ YV KVRLSGPA
Sbjct: 166 IRPYLAGTGGGVLELVQINDYVVKVRLSGPA 196


>ref|XP_003594957.1| NifU-like protein [Medicago truncatula] gi|355484005|gb|AES65208.1|
           NifU-like protein [Medicago truncatula]
          Length = 242

 Score =  217 bits (552), Expect = 2e-54
 Identities = 111/153 (72%), Positives = 123/153 (80%)
 Frame = -1

Query: 461 SIRHFFSSNTSHRRRKQAGVVIAPRCVLPLTEESVEKVLDEFGPGLMADGGNVALHEIDG 282
           +I+  F   +    R +AG V++PRCVLPLTEE+VEKVLDE  PGLMADGGNVALHEIDG
Sbjct: 62  NIKQVFGLISRRAPRNKAGFVVSPRCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDG 121

Query: 281 LVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEIMEVEQILDTETGXXXXXXXXXXXX 102
           LVV+LKLQGACGSCPSSTMTLKMGIETRLRDKIPEI+EVEQILDTETG            
Sbjct: 122 LVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQILDTETGLELTEDNVESVL 181

Query: 101 XEIRPYLSGTGGGVLELVQIDGYVAKVRLSGPA 3
            EIRPYL GTGGG LELV+I+ Y+ KVRLSGPA
Sbjct: 182 SEIRPYLIGTGGGTLELVEINDYIVKVRLSGPA 214