BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024876
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24922.3| unnamed protein product [Vitis vinifera]              137   9e-31
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   137   9e-31
ref|XP_001769043.1| predicted protein [Physcomitrella patens sub...   125   3e-27
emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]     125   4e-27
ref|XP_001758663.1| predicted protein [Physcomitrella patens sub...   125   5e-27

>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/98 (66%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2    RITELPIRRWTEDYKAFLEFAMTGSDKIKEPFIMDYNVHQD-RAVHFEIFMEENKLNLAK 178
            RI+ELP+R+WT+DYK FLE  MTG+DKIK+PFI DY  H D   VHFE+ M E  L +AK
Sbjct: 910  RISELPVRKWTQDYKEFLESIMTGNDKIKDPFIKDYKEHNDDTTVHFEVIMSEENLLMAK 969

Query: 179  QEGLLKKFNLTTSFSTSNMHLFDPKGAIKKFDNPEQIL 292
            QEGLL+KF LTT  STSNMHLFD  G IKK++ PEQIL
Sbjct: 970  QEGLLQKFKLTTKISTSNMHLFDSNGTIKKYETPEQIL 1007


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/98 (66%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2    RITELPIRRWTEDYKAFLEFAMTGSDKIKEPFIMDYNVHQD-RAVHFEIFMEENKLNLAK 178
            RI+ELP+R+WT+DYK FLE  MTG+DKIK+PFI DY  H D   VHFE+ M E  L +AK
Sbjct: 910  RISELPVRKWTQDYKEFLESIMTGNDKIKDPFIKDYKEHNDDTTVHFEVIMSEENLLMAK 969

Query: 179  QEGLLKKFNLTTSFSTSNMHLFDPKGAIKKFDNPEQIL 292
            QEGLL+KF LTT  STSNMHLFD  G IKK++ PEQIL
Sbjct: 970  QEGLLQKFKLTTKISTSNMHLFDSNGTIKKYETPEQIL 1007


>ref|XP_001769043.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162679677|gb|EDQ66121.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 1172

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/98 (61%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2    RITELPIRRWTEDYKAFLEFAMTGSDKIKEPFIMDYNVHQ-DRAVHFEIFMEENKLNLAK 178
            +I+ELP+R+WT+DYK FL+  MT SDK KEPFI D+  H  D  VHFE+ + E  + +A 
Sbjct: 909  KISELPVRKWTQDYKEFLDVMMTPSDKNKEPFIKDFREHNTDTKVHFELSLSEENMAIAL 968

Query: 179  QEGLLKKFNLTTSFSTSNMHLFDPKGAIKKFDNPEQIL 292
             EGL+KKF LTT+ STSNMHLFD KG IKK+D PEQIL
Sbjct: 969  AEGLVKKFKLTTTISTSNMHLFDNKGIIKKYDTPEQIL 1006


>emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]
          Length = 1467

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/98 (64%), Positives = 72/98 (73%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2    RITELPIRRWTEDYKAFLEFAMTGSDKIKEPFIMDYNVHQDRA-VHFEIFMEENKLNLAK 178
            RI+ELPIRRWT+DYK FLE    G+DK K+PFI  +  H D + V   + + E KL  AK
Sbjct: 875  RISELPIRRWTQDYKEFLESISEGNDKAKDPFIEGFTQHSDHSTVDIIVHLREEKLMAAK 934

Query: 179  QEGLLKKFNLTTSFSTSNMHLFDPKGAIKKFDNPEQIL 292
            QEGLLKKF LTTS STSNMHLFD KG IKK+D PEQIL
Sbjct: 935  QEGLLKKFKLTTSISTSNMHLFDRKGVIKKYDTPEQIL 972


>ref|XP_001758663.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162690273|gb|EDQ76641.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 1238

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/98 (61%), Positives = 73/98 (74%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2    RITELPIRRWTEDYKAFLEFAMTGSDKIKEPFIMDYNVHQ-DRAVHFEIFMEENKLNLAK 178
            +I ELP+R+WT+DYK FL+  MT SDK KEPFI D+  H  D  VHFE+ + E  + +A 
Sbjct: 910  KILELPVRKWTQDYKEFLDALMTPSDKNKEPFIKDFREHNTDTKVHFELTLSEENMAIAL 969

Query: 179  QEGLLKKFNLTTSFSTSNMHLFDPKGAIKKFDNPEQIL 292
             EGL+KKF LTT+ STSNMHLFD KG IKK+D PEQIL
Sbjct: 970  AEGLVKKFKLTTTISTSNMHLFDAKGIIKKYDTPEQIL 1007