BLASTX nr result

ID: Coptis21_contig00024856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024856
         (921 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    50   1e-06
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    50   3e-06

>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 50.4 bits (119), Expect(2) = 1e-06
 Identities = 24/46 (52%), Positives = 29/46 (63%)
 Frame = +1

Query: 193 WEPPDPG*MKLNTDGS*QSDRAGSGGVIRDHNGFAILCYSAKRCKN 330
           WE P+ G  KLNTDGS     AG GG+ RDHNG  I  Y++K  +N
Sbjct: 268 WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQN 313



 Score = 28.9 bits (63), Expect(2) = 1e-06
 Identities = 21/74 (28%), Positives = 31/74 (41%)
 Frame = +2

Query: 344 ELIEIVHGLKICREEGNNKVKVATYSKHAAQIINKKEGTPWEVENKVLEIWELMXXXXXX 523
           EL  I  GL +    G   + V + S  A + IN+K+       + +  IW L+      
Sbjct: 319 ELWAIWRGLVLASGLGIKAIWVESDSMSAVKTINRKQPYSSRAGSCLNHIWVLLEKFEKY 378

Query: 524 XXXXXYREANTAAD 565
                +RE N AAD
Sbjct: 379 LVSHTWRETNKAAD 392


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 50.4 bits (119), Expect(2) = 3e-06
 Identities = 24/46 (52%), Positives = 29/46 (63%)
 Frame = +1

Query: 193 WEPPDPG*MKLNTDGS*QSDRAGSGGVIRDHNGFAILCYSAKRCKN 330
           WE P+ G  KLNTDGS     AG GG+ RDHNG  I  Y++K  +N
Sbjct: 155 WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQN 200



 Score = 27.3 bits (59), Expect(2) = 3e-06
 Identities = 20/74 (27%), Positives = 30/74 (40%)
 Frame = +2

Query: 344 ELIEIVHGLKICREEGNNKVKVATYSKHAAQIINKKEGTPWEVENKVLEIWELMXXXXXX 523
           EL  I  GL +    G   + V + S    + IN+K+       + +  IW L+      
Sbjct: 206 ELWAIWRGLVLASGLGIKAIWVESDSMSVVKTINRKQPYSSRAGSCLNHIWVLLGKFEKY 265

Query: 524 XXXXXYREANTAAD 565
                +RE N AAD
Sbjct: 266 RVSHTWRETNKAAD 279


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