BLASTX nr result
ID: Coptis21_contig00024855
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024855 (489 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI17183.3| unnamed protein product [Vitis vinifera] 108 6e-22 ref|XP_002274452.1| PREDICTED: uncharacterized protein LOC100265... 108 6e-22 ref|XP_002313350.1| predicted protein [Populus trichocarpa] gi|2... 106 2e-21 ref|XP_002318884.1| predicted protein [Populus trichocarpa] gi|2... 99 4e-19 ref|NP_001045344.1| Os01g0939000 [Oryza sativa Japonica Group] g... 90 2e-16 >emb|CBI17183.3| unnamed protein product [Vitis vinifera] Length = 161 Score = 108 bits (269), Expect = 6e-22 Identities = 50/82 (60%), Positives = 60/82 (73%), Gaps = 3/82 (3%) Frame = +1 Query: 37 TSLVTKRQNVFWGWCFFVLSWISFLGFLYAAVLP---PLSENPTISAIQNDRYYCMLMPI 207 + V + VFWGW F + I FLGFLYAAV+ P S N ISAIQ DRYYC L+P+ Sbjct: 80 SQFVASKDRVFWGWIFLIFGSIFFLGFLYAAVISKLLPPSGNVIISAIQKDRYYCFLVPL 139 Query: 208 TLPIVVVAVYFHWLSMELFKHA 273 T+PI++VAVYFHWLSM+LFKHA Sbjct: 140 TIPILIVAVYFHWLSMKLFKHA 161 >ref|XP_002274452.1| PREDICTED: uncharacterized protein LOC100265449 [Vitis vinifera] Length = 88 Score = 108 bits (269), Expect = 6e-22 Identities = 50/82 (60%), Positives = 60/82 (73%), Gaps = 3/82 (3%) Frame = +1 Query: 37 TSLVTKRQNVFWGWCFFVLSWISFLGFLYAAVLP---PLSENPTISAIQNDRYYCMLMPI 207 + V + VFWGW F + I FLGFLYAAV+ P S N ISAIQ DRYYC L+P+ Sbjct: 7 SQFVASKDRVFWGWIFLIFGSIFFLGFLYAAVISKLLPPSGNVIISAIQKDRYYCFLVPL 66 Query: 208 TLPIVVVAVYFHWLSMELFKHA 273 T+PI++VAVYFHWLSM+LFKHA Sbjct: 67 TIPILIVAVYFHWLSMKLFKHA 88 >ref|XP_002313350.1| predicted protein [Populus trichocarpa] gi|222849758|gb|EEE87305.1| predicted protein [Populus trichocarpa] Length = 85 Score = 106 bits (264), Expect = 2e-21 Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 3/90 (3%) Frame = +1 Query: 13 MVQSQYHITSLVTKRQNVFWGWCFFVLSWISFLGFLYAAVLP---PLSENPTISAIQNDR 183 MV S+ ++ T F GW F ++ +SF+GFL+AAV+ PLS+NP ISAIQNDR Sbjct: 1 MVFSRMRLSETAT-----FRGWLFILMGSVSFVGFLFAAVISKLLPLSDNPIISAIQNDR 55 Query: 184 YYCMLMPITLPIVVVAVYFHWLSMELFKHA 273 YYC L+P+TLPI+V AVYFHWLSM++FKHA Sbjct: 56 YYCFLVPLTLPILVSAVYFHWLSMKMFKHA 85 >ref|XP_002318884.1| predicted protein [Populus trichocarpa] gi|222859557|gb|EEE97104.1| predicted protein [Populus trichocarpa] Length = 80 Score = 99.0 bits (245), Expect = 4e-19 Identities = 45/72 (62%), Positives = 58/72 (80%), Gaps = 3/72 (4%) Frame = +1 Query: 67 FWGWCFFVLSWISFLGFLYAAVLP---PLSENPTISAIQNDRYYCMLMPITLPIVVVAVY 237 F GW ++ +SF+GFL AAV+ PLS++P ISAIQNDRYYC L+P+TLPI+++AVY Sbjct: 9 FSGWLLILIGSVSFVGFLSAAVISKLLPLSDSPIISAIQNDRYYCFLVPLTLPILIIAVY 68 Query: 238 FHWLSMELFKHA 273 HWLSM+LFKHA Sbjct: 69 SHWLSMKLFKHA 80 >ref|NP_001045344.1| Os01g0939000 [Oryza sativa Japonica Group] gi|20160783|dbj|BAB89724.1| unknown protein [Oryza sativa Japonica Group] gi|20161323|dbj|BAB90247.1| unknown protein [Oryza sativa Japonica Group] gi|113534875|dbj|BAF07258.1| Os01g0939000 [Oryza sativa Japonica Group] gi|218189703|gb|EEC72130.1| hypothetical protein OsI_05126 [Oryza sativa Indica Group] gi|222619844|gb|EEE55976.1| hypothetical protein OsJ_04710 [Oryza sativa Japonica Group] Length = 77 Score = 89.7 bits (221), Expect = 2e-16 Identities = 42/70 (60%), Positives = 52/70 (74%), Gaps = 3/70 (4%) Frame = +1 Query: 73 GWCFFVLSWISFLGFLYAAVLP---PLSENPTISAIQNDRYYCMLMPITLPIVVVAVYFH 243 G F I F+GF YAAVL P EN +SAIQNDRYYC+L+P+TLP+++VAVY H Sbjct: 8 GSAFIAFGIILFVGFFYAAVLTKMLPPYENRFLSAIQNDRYYCLLIPLTLPVIIVAVYLH 67 Query: 244 WLSMELFKHA 273 WLSM++FKHA Sbjct: 68 WLSMKMFKHA 77