BLASTX nr result

ID: Coptis21_contig00024855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024855
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17183.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_002274452.1| PREDICTED: uncharacterized protein LOC100265...   108   6e-22
ref|XP_002313350.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002318884.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|NP_001045344.1| Os01g0939000 [Oryza sativa Japonica Group] g...    90   2e-16

>emb|CBI17183.3| unnamed protein product [Vitis vinifera]
          Length = 161

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/82 (60%), Positives = 60/82 (73%), Gaps = 3/82 (3%)
 Frame = +1

Query: 37  TSLVTKRQNVFWGWCFFVLSWISFLGFLYAAVLP---PLSENPTISAIQNDRYYCMLMPI 207
           +  V  +  VFWGW F +   I FLGFLYAAV+    P S N  ISAIQ DRYYC L+P+
Sbjct: 80  SQFVASKDRVFWGWIFLIFGSIFFLGFLYAAVISKLLPPSGNVIISAIQKDRYYCFLVPL 139

Query: 208 TLPIVVVAVYFHWLSMELFKHA 273
           T+PI++VAVYFHWLSM+LFKHA
Sbjct: 140 TIPILIVAVYFHWLSMKLFKHA 161


>ref|XP_002274452.1| PREDICTED: uncharacterized protein LOC100265449 [Vitis vinifera]
          Length = 88

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/82 (60%), Positives = 60/82 (73%), Gaps = 3/82 (3%)
 Frame = +1

Query: 37  TSLVTKRQNVFWGWCFFVLSWISFLGFLYAAVLP---PLSENPTISAIQNDRYYCMLMPI 207
           +  V  +  VFWGW F +   I FLGFLYAAV+    P S N  ISAIQ DRYYC L+P+
Sbjct: 7   SQFVASKDRVFWGWIFLIFGSIFFLGFLYAAVISKLLPPSGNVIISAIQKDRYYCFLVPL 66

Query: 208 TLPIVVVAVYFHWLSMELFKHA 273
           T+PI++VAVYFHWLSM+LFKHA
Sbjct: 67  TIPILIVAVYFHWLSMKLFKHA 88


>ref|XP_002313350.1| predicted protein [Populus trichocarpa] gi|222849758|gb|EEE87305.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/90 (57%), Positives = 67/90 (74%), Gaps = 3/90 (3%)
 Frame = +1

Query: 13  MVQSQYHITSLVTKRQNVFWGWCFFVLSWISFLGFLYAAVLP---PLSENPTISAIQNDR 183
           MV S+  ++   T     F GW F ++  +SF+GFL+AAV+    PLS+NP ISAIQNDR
Sbjct: 1   MVFSRMRLSETAT-----FRGWLFILMGSVSFVGFLFAAVISKLLPLSDNPIISAIQNDR 55

Query: 184 YYCMLMPITLPIVVVAVYFHWLSMELFKHA 273
           YYC L+P+TLPI+V AVYFHWLSM++FKHA
Sbjct: 56  YYCFLVPLTLPILVSAVYFHWLSMKMFKHA 85


>ref|XP_002318884.1| predicted protein [Populus trichocarpa] gi|222859557|gb|EEE97104.1|
           predicted protein [Populus trichocarpa]
          Length = 80

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/72 (62%), Positives = 58/72 (80%), Gaps = 3/72 (4%)
 Frame = +1

Query: 67  FWGWCFFVLSWISFLGFLYAAVLP---PLSENPTISAIQNDRYYCMLMPITLPIVVVAVY 237
           F GW   ++  +SF+GFL AAV+    PLS++P ISAIQNDRYYC L+P+TLPI+++AVY
Sbjct: 9   FSGWLLILIGSVSFVGFLSAAVISKLLPLSDSPIISAIQNDRYYCFLVPLTLPILIIAVY 68

Query: 238 FHWLSMELFKHA 273
            HWLSM+LFKHA
Sbjct: 69  SHWLSMKLFKHA 80


>ref|NP_001045344.1| Os01g0939000 [Oryza sativa Japonica Group]
           gi|20160783|dbj|BAB89724.1| unknown protein [Oryza
           sativa Japonica Group] gi|20161323|dbj|BAB90247.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113534875|dbj|BAF07258.1| Os01g0939000 [Oryza sativa
           Japonica Group] gi|218189703|gb|EEC72130.1| hypothetical
           protein OsI_05126 [Oryza sativa Indica Group]
           gi|222619844|gb|EEE55976.1| hypothetical protein
           OsJ_04710 [Oryza sativa Japonica Group]
          Length = 77

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/70 (60%), Positives = 52/70 (74%), Gaps = 3/70 (4%)
 Frame = +1

Query: 73  GWCFFVLSWISFLGFLYAAVLP---PLSENPTISAIQNDRYYCMLMPITLPIVVVAVYFH 243
           G  F     I F+GF YAAVL    P  EN  +SAIQNDRYYC+L+P+TLP+++VAVY H
Sbjct: 8   GSAFIAFGIILFVGFFYAAVLTKMLPPYENRFLSAIQNDRYYCLLIPLTLPVIIVAVYLH 67

Query: 244 WLSMELFKHA 273
           WLSM++FKHA
Sbjct: 68  WLSMKMFKHA 77


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