BLASTX nr result

ID: Coptis21_contig00024846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024846
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279634.2| PREDICTED: probable receptor-like protein ki...    74   1e-11
emb|CBI26984.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_002314841.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
emb|CBI15487.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_002314843.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>ref|XP_002279634.2| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Vitis vinifera]
          Length = 459

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/71 (47%), Positives = 44/71 (61%)
 Frame = -1

Query: 216 LRWTASRCEDCSESGGRCGFDYVMYKFMCFCPDRPHQRRCGSRSKKRTKVFLGGATGIGG 37
           L+W AS C  C ESGG+CGF+   Y F CFC DR H + C SR+ K  K+ +  A GI G
Sbjct: 45  LKWRASDCSKCEESGGKCGFNITDYHFKCFCRDRAHAKYCVSRNDKGMKLRVAPAVGI-G 103

Query: 36  VLLSCIIFILY 4
           VLL+ + F  +
Sbjct: 104 VLLAVVFFFCF 114


>emb|CBI26984.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/71 (47%), Positives = 44/71 (61%)
 Frame = -1

Query: 216 LRWTASRCEDCSESGGRCGFDYVMYKFMCFCPDRPHQRRCGSRSKKRTKVFLGGATGIGG 37
           L+W AS C  C ESGG+CGF+   Y F CFC DR H + C SR+ K  K+ +  A GI G
Sbjct: 207 LKWRASDCSKCEESGGKCGFNITDYHFKCFCRDRAHAKYCVSRNDKGMKLRVAPAVGI-G 265

Query: 36  VLLSCIIFILY 4
           VLL+ + F  +
Sbjct: 266 VLLAVVFFFCF 276


>ref|XP_002314841.1| predicted protein [Populus trichocarpa] gi|222863881|gb|EEF01012.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 30/48 (62%), Positives = 33/48 (68%)
 Frame = -1

Query: 216 LRWTASRCEDCSESGGRCGFDYVMYKFMCFCPDRPHQRRCGSRSKKRT 73
           L WTAS C  C ESGG+CGFD   Y F CFCPDRPH +RC S  + RT
Sbjct: 216 LNWTASDCSICEESGGKCGFDTATYHFQCFCPDRPHAKRCYSAIQYRT 263


>emb|CBI15487.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = -1

Query: 216 LRWTASRCEDCSESGGRCGFDYVMYKFMCFCPDRPHQRRCGSRS-KKRTKVFLGGATGIG 40
           L WTA+ C  C  SGGRCGF+    +F+CFC DRPH R C         KV +G   G+G
Sbjct: 528 LSWTANNCSSCERSGGRCGFE--NNEFICFCQDRPHLRTCHDEGLNYHRKVIIGVCAGLG 585

Query: 39  GVLLSCIIFILY 4
            +L+S I F++Y
Sbjct: 586 TLLISSIFFLMY 597


>ref|XP_002314843.1| predicted protein [Populus trichocarpa] gi|222863883|gb|EEF01014.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 28/42 (66%), Positives = 30/42 (71%)
 Frame = -1

Query: 216 LRWTASRCEDCSESGGRCGFDYVMYKFMCFCPDRPHQRRCGS 91
           L WTAS C DC ESGG+CGFD   Y F CFCPDRPH  +C S
Sbjct: 214 LNWTASNCSDCEESGGKCGFDTATYDFKCFCPDRPHTWQCNS 255


Top