BLASTX nr result

ID: Coptis21_contig00024845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024845
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15487.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_002314841.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_004157469.1| PREDICTED: probable serine/threonine-protein...    66   3e-09
ref|XP_004137621.1| PREDICTED: probable serine/threonine-protein...    66   3e-09
ref|XP_002321487.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>emb|CBI15487.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
 Frame = +1

Query: 1   PGFELSCKDREPILTMQGDEYIIRKIFYRNQSILMTKAGV-SNDICXXXXXXXXXXXXVF 177
           P F ++C D +P+LT+  D Y+IR+IFY N S LM+ + V   D C             F
Sbjct: 379 PNFSITCNDEKPVLTISDDYYVIREIFYTNHSFLMSNSAVYDGDSCPTPLHNFSLDRTPF 438

Query: 178 TVVPATDNLFLFFNCTALQSREYLPYELNCTTTANPRHRPLAMFSNDPMLTYVNQSGQ-C 354
              P+  +L LF+NCT++   E L   ++C   +N      A F ++  L Y+N S + C
Sbjct: 439 NYSPSHYDLLLFYNCTSVPV-ETLTIPIDC--MSNATLHSFASF-HEEALEYMNFSTESC 494

Query: 355 ENSAVIPVDTIRNGSLGTTVYRNFIHEFLNKG 450
           ++   +PVD       G  +  NF  E L +G
Sbjct: 495 QSMVNVPVDIDGEEGFGNLLNWNFT-EILREG 525


>ref|XP_002314841.1| predicted protein [Populus trichocarpa] gi|222863881|gb|EEF01012.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 6/142 (4%)
 Frame = +1

Query: 1   PGFELSCKDR-EPILTMQGDEYIIRKIFYRNQSILMTKAGV--SNDICXXXXXXXXXXXX 171
           PGF +SC D+ +P+  +  +EYII +I+Y+NQS+ ++ A V   +  C            
Sbjct: 66  PGFTISCNDKGKPVFNLSNNEYIIHEIYYQNQSLRVSNAAVFGKSPSCTPQIQNISLDDG 125

Query: 172 VFTVVPATDNLFLFFNCTAL---QSREYLPYELNCTTTANPRHRPLAMFSNDPMLTYVNQ 342
            F     + +LFL +NC +     + E L Y+++C    N   R LAM  +DP+L   + 
Sbjct: 126 RFHRSSNSKDLFLLYNCNSTLLSNNSELLNYKVDC-HGENETVRTLAMLEDDPLLG--ST 182

Query: 343 SGQCENSAVIPVDTIRNGSLGT 408
             +C    + PVD  R  ++GT
Sbjct: 183 LDKCRTRVLAPVDVYRGENVGT 204


>ref|XP_004157469.1| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
           [Cucumis sativus]
          Length = 645

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
 Frame = +1

Query: 1   PGFELSCKDREPILTMQGDEYIIRKIFYRNQSILMTKAGVSNDICXXXXXXXXXXXXVFT 180
           P F +SCKD  PI+ +  ++YIIR I Y+N S L+T   V +  C             F+
Sbjct: 59  PSFRISCKDENPIIRISNEDYIIRDISYKNHSFLLTNDAVYDSNCLTPLHNFSLHRTPFS 118

Query: 181 VVPATDNLFLFFNCTALQSREYLPYELNCTTTANPRHRPLAMFSNDPMLTYVN-QSGQCE 357
                   F F+NCT+L       Y ++C++T+  +      F ++  L ++N  S  C+
Sbjct: 119 YSSDHIGFFFFYNCTSLPPN--YSYPIDCSSTS--KLHSFGAF-HEGYLEFMNFSSNSCQ 173

Query: 358 NSAVIPVD 381
           +S  +P+D
Sbjct: 174 SSVEVPMD 181


>ref|XP_004137621.1| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
           [Cucumis sativus]
          Length = 652

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
 Frame = +1

Query: 1   PGFELSCKDREPILTMQGDEYIIRKIFYRNQSILMTKAGVSNDICXXXXXXXXXXXXVFT 180
           P F +SCKD  PI+ +  ++YIIR I Y+N S L+T   V +  C             F+
Sbjct: 59  PSFRISCKDENPIIRISNEDYIIRDISYKNHSFLLTNDAVYDSNCLTPLHNFSLHRTPFS 118

Query: 181 VVPATDNLFLFFNCTALQSREYLPYELNCTTTANPRHRPLAMFSNDPMLTYVN-QSGQCE 357
                   F F+NCT+L       Y ++C++T+  +      F ++  L ++N  S  C+
Sbjct: 119 YSSDHIGFFFFYNCTSLPPN--YSYPIDCSSTS--KLHSFGAF-HEGYLEFMNFSSNSCQ 173

Query: 358 NSAVIPVD 381
           +S  +P+D
Sbjct: 174 SSVEVPMD 181


>ref|XP_002321487.1| predicted protein [Populus trichocarpa] gi|222868483|gb|EEF05614.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 43/145 (29%), Positives = 62/145 (42%), Gaps = 2/145 (1%)
 Frame = +1

Query: 1   PGFELSCKDREPILTMQGDEYIIRKIFYRNQSILMTKAGVSNDICXXXXXXXXXXXXVFT 180
           P F L+C D+ P LT+  D YII+ I Y   S+ +  A V  + C              T
Sbjct: 67  PNFMLTCSDKRPALTISNDVYIIKDISYATNSMRVANAAVYEETCPPLLHNISLDRTPLT 126

Query: 181 VVPATDNLFLFFNCTALQSREYLPYELNCTTTANPRHRPLAMFS-NDPMLTYVNQSGQCE 357
           + P   N   F+NCT      Y  Y L+C T  N  H  +A F   +  +  +     C+
Sbjct: 127 ISPGYTNFSFFYNCTLKPEDYYTLYALSCAT--NSTHYSIAGFHLEETEMPNIYLLNSCQ 184

Query: 358 NSAVIPVDTIRN-GSLGTTVYRNFI 429
           + A  P+ T  + GSL    YR  +
Sbjct: 185 DFANAPIHTGEDIGSLLGENYREVL 209


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