BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024827
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containi...   211   5e-53
ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containi...   194   8e-48
ref|XP_003612258.1| Pentatricopeptide repeat-containing protein ...   191   5e-47
ref|XP_002520592.1| pentatricopeptide repeat-containing protein,...   184   6e-45
ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containi...   182   3e-44

>ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 788

 Score =  211 bits (537), Expect = 5e-53
 Identities = 97/145 (66%), Positives = 122/145 (84%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D+V WNTMIAGY+QCG M+EA+ LFKQ  KK++VSWNTM+A YAQ GQMD  ++IFEEM+
Sbjct: 356 DVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMK 415

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHFVLMAKEGKRPDQSSFASGLSACANLAALQIGKQ 362
           +KN+V+WNSLISG TQNG   +AL+ F+LM  EG++PDQS+FA GLS+CA+LAALQ+GKQ
Sbjct: 416 EKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQ 475

Query: 363 IHNLAAKIGYGSDLFVGNALITMYS 437
           +H L  K GY +DLFV NALITMY+
Sbjct: 476 LHQLVMKSGYATDLFVSNALITMYA 500



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/123 (30%), Positives = 73/123 (59%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D+VSWN M+ G+ + G++  + + F++ P  N VSW TM+ G+A+ G++    R+F++M 
Sbjct: 201 DVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMP 260

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHFVLMAKEGKRPDQSSFASGLSACANLAALQIGKQ 362
            +N+V WN++I+ + QN    EA+  F+ M ++    +  S+ + ++    +  L   +Q
Sbjct: 261 IRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEK----NSISWTTVINGYVRMGKLDEARQ 316

Query: 363 IHN 371
           + N
Sbjct: 317 LLN 319



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/85 (41%), Positives = 56/85 (65%)
 Frame = +3

Query: 9   VSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEMEQK 188
           V  N M+AGYA+    +EA +LF   P K+LVSWN+M+ GY + G+M + ++ FEEM ++
Sbjct: 141 VCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAER 200

Query: 189 NLVTWNSLISGFTQNGFNTEALEHF 263
           ++V+WN ++ GF + G    + E F
Sbjct: 201 DVVSWNLMVDGFVEVGDLNSSWEFF 225



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 32/87 (36%), Positives = 56/87 (64%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           ++V+WN MIA Y Q  +++EA+ LF + P+KN +SW T+I GY + G++D   ++  +M 
Sbjct: 263 NVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMP 322

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHF 263
            +N+    ++ISG+ QN    +A + F
Sbjct: 323 YRNVAAQTAMISGYVQNKRMDDARQIF 349



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 32/124 (25%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSW------------------------ 110
           +IVSWN+MIA Y     +EEA +LF + P ++L SW                        
Sbjct: 76  NIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLP 135

Query: 111 --------NTMIAGYAQQGQMDIVVRIFEEMEQKNLVTWNSLISGFTQNGFNTEALEHFV 266
                   N M+AGYA+  Q D   R+F+ M  K+LV+WNS+++G+T+NG     L+ F 
Sbjct: 136 YKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFE 195

Query: 267 LMAK 278
            MA+
Sbjct: 196 EMAE 199



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/87 (33%), Positives = 53/87 (60%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D+VSWN+M+ GY + G M   ++ F++  ++++VSWN M+ G+ + G ++     FE++ 
Sbjct: 170 DLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIP 229

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHF 263
             N V+W +++ GF + G   EA   F
Sbjct: 230 NPNTVSWVTMLCGFARFGKIAEARRLF 256



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/88 (34%), Positives = 58/88 (65%)
 Frame = +3

Query: 9   VSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEMEQK 188
           V+ N+MI+ +A+ G + +A +LF   P++N+VSWN+MIA Y    +++   ++F++M  +
Sbjct: 47  VTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTR 106

Query: 189 NLVTWNSLISGFTQNGFNTEALEHFVLM 272
           +L +W  +I+ +T+NG   +A   F L+
Sbjct: 107 DLYSWTLMITCYTRNGELAKARNLFNLL 134



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 39/160 (24%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFK------QTPKKN---------------------- 98
           +IVSWN++I+G  Q G+  +A+K F       Q P ++                      
Sbjct: 418 NIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLH 477

Query: 99  -----------LVSWNTMIAGYAQQGQMDIVVRIFEEMEQKNLVTWNSLISGFTQNGFNT 245
                      L   N +I  YA+ G +     +F++++  ++V+WNSLI+ +  NG   
Sbjct: 478 QLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGR 537

Query: 246 EALEHFVLMAKEGKRPDQSSFASGLSACANLAALQIGKQI 365
           EAL+ F  M  EG  PD+ +F   LSAC+++  +  G ++
Sbjct: 538 EALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKL 577



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/82 (34%), Positives = 51/82 (62%)
 Frame = +3

Query: 18  NTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEMEQKNLV 197
           N  I    + G ++EA+K+F+    KN V+ N+MI+ +A+ G++    ++F+ M Q+N+V
Sbjct: 19  NLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIV 78

Query: 198 TWNSLISGFTQNGFNTEALEHF 263
           +WNS+I+ +  N    EA + F
Sbjct: 79  SWNSMIAAYLHNDRVEEARQLF 100


>ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 748

 Score =  194 bits (492), Expect = 8e-48
 Identities = 91/145 (62%), Positives = 113/145 (77%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D+V WN+MIAGY++ G M+EA+ LF+Q P KN VSWNTMI+GYAQ GQMD    IF+ M 
Sbjct: 358 DVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMR 417

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHFVLMAKEGKRPDQSSFASGLSACANLAALQIGKQ 362
           +KN+V+WNSLI+GF QN    +AL+  V+M KEGK+PDQS+FA  LSACANLAALQ+G Q
Sbjct: 418 EKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQ 477

Query: 363 IHNLAAKIGYGSDLFVGNALITMYS 437
           +H    K GY +DLFVGNALI MY+
Sbjct: 478 LHEYILKSGYMNDLFVGNALIAMYA 502



 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 38/87 (43%), Positives = 62/87 (71%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D   WN MIAGYA+ G   +A K+F+Q P K+LVS+N+M+AGY Q G+M + ++ FE M 
Sbjct: 141 DTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMT 200

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHF 263
           ++N+V+WN +++G+ ++G  + A + F
Sbjct: 201 ERNVVSWNLMVAGYVKSGDLSSAWQLF 227



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/123 (33%), Positives = 73/123 (59%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           ++VSWN M+AGY + G++  A +LF++ P  N VSW TM+ G A+ G+M     +F+ M 
Sbjct: 203 NVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMP 262

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHFVLMAKEGKRPDQSSFASGLSACANLAALQIGKQ 362
            KN+V+WN++I+ + Q+    EA++ F    K+    D  S+ + ++    +  L   +Q
Sbjct: 263 SKNVVSWNAMIATYVQDLQVDEAVKLF----KKMPHKDSVSWTTIINGYIRVGKLDEARQ 318

Query: 363 IHN 371
           ++N
Sbjct: 319 VYN 321



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
 Frame = +3

Query: 9   VSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEMEQK 188
           VSW TM+ G A+ G M EA +LF + P KN+VSWN MIA Y Q  Q+D  V++F++M  K
Sbjct: 236 VSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHK 295

Query: 189 NLVTWNSLISGFTQNGFNTEALEHFVLMAKEGKRPDQSSFASGLSACANLAALQIGK--Q 362
           + V+W ++I+G+ + G   EA + +  M  +     Q++  SGL        +Q G+  +
Sbjct: 296 DSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITA-QTALMSGL--------IQNGRIDE 346

Query: 363 IHNLAAKIGYGSDLFVGNALITMYS 437
              + ++IG   D+   N++I  YS
Sbjct: 347 ADQMFSRIG-AHDVVCWNSMIAGYS 370



 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 34/87 (39%), Positives = 56/87 (64%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D+VS+N+M+AGY Q G M  A++ F+   ++N+VSWN M+AGY + G +    ++FE++ 
Sbjct: 172 DLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIP 231

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHF 263
             N V+W +++ G  + G   EA E F
Sbjct: 232 NPNAVSWVTMLCGLAKYGKMAEARELF 258



 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 38/87 (43%), Positives = 57/87 (65%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           ++VSWN MIA Y Q   ++EAVKLFK+ P K+ VSW T+I GY + G++D   +++ +M 
Sbjct: 265 NVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMP 324

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHF 263
            K++    +L+SG  QNG   EA + F
Sbjct: 325 CKDITAQTALMSGLIQNGRIDEADQMF 351



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/93 (41%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKK-NLVSWNTMIAGYAQQGQMDIVVRIFEEM 179
           D  SW  MI  Y + G +E+A +L +  P K +   WN MIAGYA++GQ +   ++FE+M
Sbjct: 109 DNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQM 168

Query: 180 EQKNLVTWNSLISGFTQNGFNTEALEHFVLMAK 278
             K+LV++NS+++G+TQNG    AL+ F  M +
Sbjct: 169 PAKDLVSYNSMLAGYTQNGKMHLALQFFESMTE 201



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 39/160 (24%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVK------------------------------------- 71
           +IVSWN++IAG+ Q     +A+K                                     
Sbjct: 420 NIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLH 479

Query: 72  --LFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEMEQKNLVTWNSLISGFTQNGFNT 245
             + K     +L   N +IA YA+ G++    ++F ++E  +L++WNSLISG+  NG+  
Sbjct: 480 EYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYAN 539

Query: 246 EALEHFVLMAKEGKRPDQSSFASGLSACANLAALQIGKQI 365
           +A + F  M+ E   PD+ +F   LSAC++      G  I
Sbjct: 540 KAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDI 579



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/101 (32%), Positives = 60/101 (59%)
 Frame = +3

Query: 18  NTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEMEQKNLV 197
           N  I    + G +EEA+++F     KNLV++N+MI+  A+  ++    ++F++M  +NLV
Sbjct: 21  NRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLV 80

Query: 198 TWNSLISGFTQNGFNTEALEHFVLMAKEGKRPDQSSFASGL 320
           +WN++I+G+  N    EA E F +M      P++ +F+  L
Sbjct: 81  SWNTMIAGYLHNNMVEEASELFDVM------PERDNFSWAL 115



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/85 (34%), Positives = 53/85 (62%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           ++V++N+MI+  A+   + +A +LF Q   +NLVSWNTMIAGY     ++    +F+ M 
Sbjct: 47  NLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMP 106

Query: 183 QKNLVTWNSLISGFTQNGFNTEALE 257
           +++  +W  +I+ +T+ G   +A E
Sbjct: 107 ERDNFSWALMITCYTRKGKLEKARE 131



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D+   N +IA YA+CG ++ A ++F+     +L+SWN++I+GYA  G  +   + FE+M 
Sbjct: 490 DLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMS 549

Query: 183 QKNL----VTWNSLISGFTQNGFNTEALEHFVLMAKE 281
            + +    VT+  ++S  +  G   + L+ F  M ++
Sbjct: 550 SERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIED 586


>ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513593|gb|AES95216.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 907

 Score =  191 bits (485), Expect = 5e-47
 Identities = 90/145 (62%), Positives = 111/145 (76%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D + WN+MIAGY Q G M EA+ LF+Q P KN VSWNTMI+GYAQ G+MD    IFE M 
Sbjct: 358 DAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMG 417

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHFVLMAKEGKRPDQSSFASGLSACANLAALQIGKQ 362
            +N+++WNSLI+GF QNG   +AL+  VLM +EGK+PDQS+FA  LS+CANLAALQ+GKQ
Sbjct: 418 VRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQ 477

Query: 363 IHNLAAKIGYGSDLFVGNALITMYS 437
           +H L  K GY +DLFV NALI MY+
Sbjct: 478 LHELILKSGYINDLFVSNALIAMYA 502



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 36/77 (46%), Positives = 57/77 (74%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D   WN MIAGYA+ G  ++A K+F++ P K+LVS+N+M+AGY Q G+M + ++ FE M 
Sbjct: 141 DTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMA 200

Query: 183 QKNLVTWNSLISGFTQN 233
           ++N+V+WN +++GF  N
Sbjct: 201 ERNVVSWNLMVAGFVNN 217



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/92 (44%), Positives = 59/92 (64%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           ++VSWN MIA Y Q   ++EAVKLFK+TP K+ VSW TMI GY + G++D    ++ +M 
Sbjct: 265 NVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMP 324

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHFVLMAK 278
            K++    +L+SG  QNG   EA + F  + K
Sbjct: 325 YKDVAAKTALMSGLIQNGRIDEASQVFSQLNK 356



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/83 (46%), Positives = 56/83 (67%)
 Frame = +3

Query: 9   VSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEMEQK 188
           VSW TM+ G+A+ G + EA KLF + P KN+VSWN MIA Y Q  Q+D  V++F+E   K
Sbjct: 236 VSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYK 295

Query: 189 NLVTWNSLISGFTQNGFNTEALE 257
           + V+W ++I+G+ + G   EA E
Sbjct: 296 DCVSWTTMINGYVRVGKLDEARE 318



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/93 (43%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKK-NLVSWNTMIAGYAQQGQMDIVVRIFEEM 179
           D  SW  MI  Y + G +E+A +LF+  P K +   WN MIAGYA++G+ D   ++FE+M
Sbjct: 109 DNFSWALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKM 168

Query: 180 EQKNLVTWNSLISGFTQNGFNTEALEHFVLMAK 278
             K+LV++NS+++G+TQNG    A++ F  MA+
Sbjct: 169 PVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAE 201



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/123 (30%), Positives = 73/123 (59%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           ++VSWN M+AG+    ++  A +LF++ P  N VSW TM+ G+A+ G++    ++F+ M 
Sbjct: 203 NVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMP 262

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHFVLMAKEGKRPDQSSFASGLSACANLAALQIGKQ 362
            KN+V+WN++I+ + Q+    EA++ F    KE    D  S+ + ++    +  L   ++
Sbjct: 263 CKNVVSWNAMIAAYVQDLQIDEAVKLF----KETPYKDCVSWTTMINGYVRVGKLDEARE 318

Query: 363 IHN 371
           ++N
Sbjct: 319 VYN 321



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 33/87 (37%), Positives = 56/87 (64%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D+VS+N+M+AGY Q G M  A+K F++  ++N+VSWN M+AG+     +     +FE++ 
Sbjct: 172 DLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIP 231

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHF 263
             N V+W +++ GF ++G   EA + F
Sbjct: 232 DPNAVSWVTMLCGFARHGKIVEARKLF 258



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 39/150 (26%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVK---LFKQTPKK-------------------------- 95
           +++SWN++I G+ Q G   +A+K   L  Q  KK                          
Sbjct: 420 NVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLH 479

Query: 96  ----------NLVSWNTMIAGYAQQGQMDIVVRIFEEMEQKNLVTWNSLISGFTQNGFNT 245
                     +L   N +IA YA+ G +    ++F+++E  +L++WNSLISG+  NG+  
Sbjct: 480 ELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYAN 539

Query: 246 EALEHFVLMAKEGKRPDQSSFASGLSACAN 335
           EA   F  M+ EG  PD+ +F   LSAC++
Sbjct: 540 EAFWAFEQMSSEGTVPDEVTFIGMLSACSH 569



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 39/145 (26%), Positives = 77/145 (53%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           ++ + N  I    + G ++EA ++F     KN  ++N+M+  +A+ G++    ++F++M 
Sbjct: 16  NVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMS 75

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHFVLMAKEGKRPDQSSFASGLSACANLAALQIGKQ 362
           Q+NLV+WN++I+G+  N    EA + F LMA+     D  S+A  ++       L+  ++
Sbjct: 76  QRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAER----DNFSWALMITCYTRKGMLEKARE 131

Query: 363 IHNLAAKIGYGSDLFVGNALITMYS 437
           +  L   +    D    NA+I  Y+
Sbjct: 132 LFEL---VPDKLDTACWNAMIAGYA 153


>ref|XP_002520592.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540252|gb|EEF41825.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 525

 Score =  184 bits (467), Expect = 6e-45
 Identities = 87/145 (60%), Positives = 117/145 (80%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D+V +NTM+AGY QCG ++EA+ LF+Q  KK++VSWNTM+A YAQ GQM+  +++F+EM 
Sbjct: 318 DMVCFNTMLAGYTQCGRVDEAIHLFEQMVKKDIVSWNTMVAAYAQVGQMERALKVFKEMG 377

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHFVLMAKEGKRPDQSSFASGLSACANLAALQIGKQ 362
           ++NLV+WNSLISGF  +G   +AL  FVLM  EGK+PDQS+FA  LS+CA +AALQ+G+Q
Sbjct: 378 ERNLVSWNSLISGFMLHGMYLDALWCFVLMQHEGKKPDQSTFACALSSCAIVAALQVGRQ 437

Query: 363 IHNLAAKIGYGSDLFVGNALITMYS 437
           +H+L  K GY +DLFV NALITMY+
Sbjct: 438 LHHLVIKSGYINDLFVCNALITMYA 462



 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 38/87 (43%), Positives = 60/87 (68%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D   WN MI+GY++ G  ++A +LF + P KN+VSWN+M+AGY Q GQM + +++F EM 
Sbjct: 101 DAACWNAMISGYSREGRYDDAKRLFNEMPVKNIVSWNSMLAGYTQNGQMSLALQLFHEML 160

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHF 263
           ++++V+WN ++ GF + G    A E F
Sbjct: 161 ERDVVSWNLMVDGFVELGDLDSAWEFF 187



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/92 (40%), Positives = 64/92 (69%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D+VSWN M+ G+ + G+++ A + FK+ P+ N+VSW TM+ G+A++G++    R+F++M 
Sbjct: 163 DVVSWNLMVDGFVELGDLDSAWEFFKKVPEPNIVSWVTMLYGFARKGKLLEARRLFDQMP 222

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHFVLMAK 278
            KN+V+WN++IS + Q+    EA + F  M K
Sbjct: 223 SKNVVSWNAMISAYVQSRQIDEAEKLFEEMPK 254



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/90 (44%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTP---KKNLVSWNTMIAGYAQQGQMDIVVRIFE 173
           D+ SW  MI  Y Q G +E+A +L    P   KK+   WN MI+GY+++G+ D   R+F 
Sbjct: 67  DLFSWTLMITCYTQNGMLEKAKQLLNSLPCNYKKDAACWNAMISGYSREGRYDDAKRLFN 126

Query: 174 EMEQKNLVTWNSLISGFTQNGFNTEALEHF 263
           EM  KN+V+WNS+++G+TQNG  + AL+ F
Sbjct: 127 EMPVKNIVSWNSMLAGYTQNGQMSLALQLF 156



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/83 (45%), Positives = 58/83 (69%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           +IVSW TM+ G+A+ G + EA +LF Q P KN+VSWN MI+ Y Q  Q+D   ++FEEM 
Sbjct: 194 NIVSWVTMLYGFARKGKLLEARRLFDQMPSKNVVSWNAMISAYVQSRQIDEAEKLFEEMP 253

Query: 183 QKNLVTWNSLISGFTQNGFNTEA 251
           +++ V+W ++I+G+ + G   EA
Sbjct: 254 KRDSVSWTTMINGYVRAGKLDEA 276



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 33/87 (37%), Positives = 57/87 (65%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           +IVSWN+M+AGY Q G M  A++LF +  ++++VSWN M+ G+ + G +D     F+++ 
Sbjct: 132 NIVSWNSMLAGYTQNGQMSLALQLFHEMLERDVVSWNLMVDGFVELGDLDSAWEFFKKVP 191

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHF 263
           + N+V+W +++ GF + G   EA   F
Sbjct: 192 EPNIVSWVTMLYGFARKGKLLEARRLF 218



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/81 (41%), Positives = 55/81 (67%)
 Frame = +3

Query: 9   VSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEMEQK 188
           V++N+MI+ YA+ G + +A  LF + P +NLVSWNTMIAGY    ++D    +F +M ++
Sbjct: 7   VTYNSMISAYAKNGRVIDARVLFDKMPCRNLVSWNTMIAGYLHNNKVDEAYELFVKMPRR 66

Query: 189 NLVTWNSLISGFTQNGFNTEA 251
           +L +W  +I+ +TQNG   +A
Sbjct: 67  DLFSWTLMITCYTQNGMLEKA 87



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/145 (29%), Positives = 74/145 (51%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           ++VSWN MI+ Y Q   ++EA KLF++ PK++ VSW TMI GY + G++D   +   ++ 
Sbjct: 225 NVVSWNAMISAYVQSRQIDEAEKLFEEMPKRDSVSWTTMINGYVRAGKLDEARKTLSKLP 284

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHFVLMAKEGKRPDQSSFASGLSACANLAALQIGKQ 362
            KN+    ++ISG+ +     EA + F     E   PD   F + L+        ++ + 
Sbjct: 285 YKNIAAQTAMISGYIKYNKIDEARQIF----NEIGTPDMVCFNTMLAGYTQCG--RVDEA 338

Query: 363 IHNLAAKIGYGSDLFVGNALITMYS 437
           IH     +    D+   N ++  Y+
Sbjct: 339 IHLFEQMV--KKDIVSWNTMVAAYA 361



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/116 (32%), Positives = 64/116 (55%)
 Frame = +3

Query: 90  KKNLVSWNTMIAGYAQQGQMDIVVRIFEEMEQKNLVTWNSLISGFTQNGFNTEALEHFVL 269
           ++N V++N+MI+ YA+ G++     +F++M  +NLV+WN++I+G+  N    EA E FV 
Sbjct: 3   QRNTVTYNSMISAYAKNGRVIDARVLFDKMPCRNLVSWNTMIAGYLHNNKVDEAYELFVK 62

Query: 270 MAKEGKRPDQSSFASGLSACANLAALQIGKQIHNLAAKIGYGSDLFVGNALITMYS 437
           M     R D  S+   ++       L+  KQ+ N +    Y  D    NA+I+ YS
Sbjct: 63  M----PRRDLFSWTLMITCYTQNGMLEKAKQLLN-SLPCNYKKDAACWNAMISGYS 113


>ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 694

 Score =  182 bits (461), Expect = 3e-44
 Identities = 86/145 (59%), Positives = 109/145 (75%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D V WNTMI+GY  CG ++EA+ LF+Q P K++VSWNTMIAGYA  GQM   V IF +M 
Sbjct: 352 DAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMN 411

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHFVLMAKEGKRPDQSSFASGLSACANLAALQIGKQ 362
           Q+N V+WNS+ISGF QNG   EAL+HFVLM ++ KR D S++A  LSACA+LAAL +G+Q
Sbjct: 412 QRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAALHVGRQ 471

Query: 363 IHNLAAKIGYGSDLFVGNALITMYS 437
            H+L A+ GY  D F GNALI+ Y+
Sbjct: 472 FHSLLARSGYIGDSFAGNALISAYA 496



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 33/87 (37%), Positives = 54/87 (62%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           DI+SWN+++ G  + G M  AVK F + P +++VSWN M+ GY + G +D    +F  + 
Sbjct: 166 DIISWNSVLVGLTRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVP 225

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHF 263
             N+V+W +L++G+ + G   EA E F
Sbjct: 226 SPNVVSWVTLLNGYCRAGRIGEARELF 252



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D+VSWN M+ GY + G+++ A  LF   P  N+VSW T++ GY + G++     +F+ + 
Sbjct: 197 DMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAGRIGEARELFDRIP 256

Query: 183 QKNLVTWNSLISGFTQNGFNTEALEHFVLMAKEGKRPDQS--SFASGLSACANLAALQIG 356
            +N+  WN ++SG+ +     EA + F  M      PD++  S+ + +SA      LQ  
Sbjct: 257 DRNVAAWNVMLSGYLRLSHMEEAYKLFTEM------PDKNSISWTTMISALVRGGKLQEA 310

Query: 357 KQI 365
           K +
Sbjct: 311 KDL 313



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 26/74 (35%), Positives = 51/74 (68%)
 Frame = +3

Query: 15  WNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEMEQKNL 194
           +N MI+GYA+ G  ++AV L ++ P  +++SWN+++ G  + G+M   V+ F+EM  +++
Sbjct: 139 YNAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFFDEMPARDM 198

Query: 195 VTWNSLISGFTQNG 236
           V+WN ++ G+ + G
Sbjct: 199 VSWNLMLEGYVRAG 212



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 31/121 (25%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIA------------------- 125
           ++ +WN M++GY +  +MEEA KLF + P KN +SW TMI+                   
Sbjct: 259 NVAAWNVMLSGYLRLSHMEEAYKLFTEMPDKNSISWTTMISALVRGGKLQEAKDLLDKMP 318

Query: 126 ------------GYAQQGQMDIVVRIFEEMEQKNLVTWNSLISGFTQNGFNTEALEHFVL 269
                       GY Q   +D    IF+ +E ++ V WN++ISG+   G   EA+  F  
Sbjct: 319 FDSFAAKTALMHGYLQSKMIDDARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQ 378

Query: 270 M 272
           M
Sbjct: 379 M 379



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 39/164 (23%)
 Frame = +3

Query: 9   VSWNTMIAGYAQCGNMEEAVK---LFKQTPKK---------------------------- 95
           VSWN++I+G+ Q G   EA++   L ++  K+                            
Sbjct: 416 VSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAALHVGRQFHSL 475

Query: 96  --------NLVSWNTMIAGYAQQGQMDIVVRIFEEMEQKNLVTWNSLISGFTQNGFNTEA 251
                   +  + N +I+ YA+ G++    ++F+EM   ++V+WN+LI G+  NG  TEA
Sbjct: 476 LARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEA 535

Query: 252 LEHFVLMAKEGKRPDQSSFASGLSACANLAALQIGKQIHNLAAK 383
           +  F  M     RPD+ +F   LSAC++   +  G    N   K
Sbjct: 536 ISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTK 579



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEME 182
           D  + N +I+ YA+CG + EA ++F + P  ++VSWN +I GYA  G     + +F EME
Sbjct: 484 DSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAISVFREME 543

Query: 183 QKNL----VTWNSLISGFTQNGFNTEALEHFVLMAKE 281
             ++    VT+  ++S  +  G   E  + F  M K+
Sbjct: 544 DNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKD 580



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   DIVSWNTMIAGYAQCGNMEEAVKLFKQTP-KKNLVSWNTMIAGYAQQGQMDIVVRIFEEM 179
           D  SW  M++ YA+ G +  A     + P  K    +N MI+GYA+ G+ D  V +  EM
Sbjct: 103 DGFSWTLMVSCYARAGELGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREM 162

Query: 180 EQKNLVTWNSLISGFTQNGFNTEALEHF 263
              ++++WNS++ G T+NG    A++ F
Sbjct: 163 PAPDIISWNSVLVGLTRNGEMVRAVKFF 190



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/90 (31%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = +3

Query: 18  NTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEMEQKNLV 197
           N  +   A+ G +  A +LF   P +N VS+N M++  A+ G++    R+F+E+ ++N V
Sbjct: 15  NQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNTV 74

Query: 198 TWNSLISGFTQNGFNTEALEHFVLM-AKEG 284
           +WN++I+  + +G   +A + F  M A++G
Sbjct: 75  SWNAMIAACSDHGRVADARDLFDAMPARDG 104



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/76 (31%), Positives = 46/76 (60%)
 Frame = +3

Query: 9   VSWNTMIAGYAQCGNMEEAVKLFKQTPKKNLVSWNTMIAGYAQQGQMDIVVRIFEEMEQK 188
           VS+N M++  A+ G + +A +LF + P++N VSWN MIA  +  G++     +F+ M  +
Sbjct: 43  VSYNAMLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDLFDAMPAR 102

Query: 189 NLVTWNSLISGFTQNG 236
           +  +W  ++S + + G
Sbjct: 103 DGFSWTLMVSCYARAG 118