BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024826
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]   135   5e-30
ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containi...   134   8e-30
ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|2...   128   6e-28
ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
ref|XP_003555175.1| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26

>emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera]
          Length = 730

 Score =  135 bits (339), Expect = 5e-30
 Identities = 77/178 (43%), Positives = 104/178 (58%), Gaps = 16/178 (8%)
 Frame = +2

Query: 5   SSLIISKQIPRWVCFISSLSCI----------------TTHATTEFESKTRFXXXXXXXX 136
           SSL +S++IP+WV  I+S+S I                T     EFE K +F        
Sbjct: 6   SSLTLSRRIPKWVPLIASMSSISSANRIQAVPEIDQTKTPPNDNEFEPKFQFLRNRLMPD 65

Query: 137 XXXXHILDSTKDLKSSVNIFKWATTQKRFYHTAHTYFFMIMKLGMAGSVQDMEFFCNEMV 316
                +LD+T DL S++ +FKWA+ QKRF HTA TYF +I+KLGM G ++DME FC+EMV
Sbjct: 66  DLI-RVLDTTHDLNSAIKVFKWASRQKRFRHTADTYFRVILKLGMGGKIEDMEAFCSEMV 124

Query: 317 KDKCPHAEEAFAELLDSFVKNRRFKEALRVLEIMNLGKFKPPSIHICNVMLRTLVEDQ 490
           ++KCP  EE    L+ SFVK+RR  EA+RVL IM    +K   I   N +L  LV ++
Sbjct: 125 REKCPGGEETLIALISSFVKHRRLSEAIRVLVIMTSNGYKFSIIEF-NGLLGALVRER 181


>ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62590-like [Vitis vinifera]
          Length = 730

 Score =  134 bits (337), Expect = 8e-30
 Identities = 77/178 (43%), Positives = 103/178 (57%), Gaps = 16/178 (8%)
 Frame = +2

Query: 5   SSLIISKQIPRWVCFISSLSCI----------------TTHATTEFESKTRFXXXXXXXX 136
           SSL +S +IP+WV  I+S+S I                T     EFE K +F        
Sbjct: 6   SSLTLSSRIPKWVPLIASMSSISCANRIQAVPEIDQTKTPPNDNEFEPKFQFLRNRLMPD 65

Query: 137 XXXXHILDSTKDLKSSVNIFKWATTQKRFYHTAHTYFFMIMKLGMAGSVQDMEFFCNEMV 316
                +LD+T DL S++ +FKWA+ QKRF HTA TYF +I+KLGM G ++DME FC+EMV
Sbjct: 66  DLI-RVLDTTHDLNSAIKVFKWASRQKRFRHTADTYFRVILKLGMGGKIEDMEAFCSEMV 124

Query: 317 KDKCPHAEEAFAELLDSFVKNRRFKEALRVLEIMNLGKFKPPSIHICNVMLRTLVEDQ 490
           ++KCP  EE    L+ SFVK+RR  EA+RVL IM    +K   I   N +L  LV ++
Sbjct: 125 REKCPGGEETLIALISSFVKHRRLSEAIRVLVIMTSNGYKFSIIEF-NGLLGALVRER 181


>ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|222857302|gb|EEE94849.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score =  128 bits (321), Expect = 6e-28
 Identities = 75/172 (43%), Positives = 105/172 (61%), Gaps = 14/172 (8%)
 Frame = +2

Query: 17  ISKQIPRWV---CFISSLSC---------ITTHAT--TEFESKTRFXXXXXXXXXXXXHI 154
           +SK IP+W+    FISS+SC         I  +A   T+F++K +              +
Sbjct: 7   LSKTIPKWLNLKSFISSVSCTNAIQINPEINQNAPNITDFDAKIQ-SLRNKLCPDYLIKV 65

Query: 155 LDSTKDLKSSVNIFKWATTQKRFYHTAHTYFFMIMKLGMAGSVQDMEFFCNEMVKDKCPH 334
           L ST D+ S+V +FKWA+ Q+RF HT  TY+++I KLGMA +V++ME FC  MVKD+CP 
Sbjct: 66  LKSTSDINSAVKLFKWASLQRRFNHTDDTYYWIIFKLGMAENVEEMEGFCQNMVKDRCPG 125

Query: 335 AEEAFAELLDSFVKNRRFKEALRVLEIMNLGKFKPPSIHICNVMLRTLVEDQ 490
            E+    L+D+FV+N R  EALRVL  MNL   K PSI + N +L  LVE++
Sbjct: 126 VEDVLLSLVDAFVRNCRLNEALRVLFNMNLAGIK-PSIDVFNFVLGALVEEK 176


>ref|XP_002329996.1| predicted protein [Populus trichocarpa] gi|222871421|gb|EEF08552.1|
           predicted protein [Populus trichocarpa]
          Length = 725

 Score =  125 bits (313), Expect = 5e-27
 Identities = 72/170 (42%), Positives = 100/170 (58%), Gaps = 14/170 (8%)
 Frame = +2

Query: 23  KQIPRWV---CFISSLSCITTHATT-----------EFESKTRFXXXXXXXXXXXXHILD 160
           K+IP+WV    FISS+SC  T               +F+ K +              +L 
Sbjct: 9   KRIPKWVNLKAFISSVSCTNTIQINPEINQNTPNFPDFDVKIQ-SLRNKLYPDNLIKVLK 67

Query: 161 STKDLKSSVNIFKWATTQKRFYHTAHTYFFMIMKLGMAGSVQDMEFFCNEMVKDKCPHAE 340
           ST D+ S+V IFKWA  Q++F HTA TY+++I KLGMAG+V++ME FC  MVK++C   E
Sbjct: 68  STSDVNSAVKIFKWAALQRKFNHTADTYYWIIFKLGMAGNVEEMEGFCQNMVKERCTGEE 127

Query: 341 EAFAELLDSFVKNRRFKEALRVLEIMNLGKFKPPSIHICNVMLRTLVEDQ 490
           +    L+D+FV+N R  EA+RVL  MNL   K PSI + N +L  LVE++
Sbjct: 128 DVLVSLVDAFVRNCRLNEAMRVLFNMNLAGIK-PSIDVFNFVLGALVEEK 176


>ref|XP_003555175.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 720

 Score =  123 bits (309), Expect = 1e-26
 Identities = 62/109 (56%), Positives = 79/109 (72%)
 Frame = +2

Query: 155 LDSTKDLKSSVNIFKWATTQKRFYHTAHTYFFMIMKLGMAGSVQDMEFFCNEMVKDKCPH 334
           LD T DL S+V IFKWA+ QK F+HT++TYF +I+KLGMAG V +M  FC  MVKD+CP 
Sbjct: 63  LDRTSDLNSAVRIFKWASRQKSFHHTSNTYFRIILKLGMAGKVLEMRDFCEYMVKDRCPG 122

Query: 335 AEEAFAELLDSFVKNRRFKEALRVLEIMNLGKFKPPSIHICNVMLRTLV 481
           AEEA   L+ +FV + R KEA+ VL  MNLG ++PP I + NV+L  LV
Sbjct: 123 AEEALVALVHTFVGHHRIKEAIAVLVNMNLGGYRPP-IEVFNVLLGALV 170