BLASTX nr result

ID: Coptis21_contig00024820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024820
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61143.1| hypothetical protein VITISV_004318 [Vitis vinifera]   252   2e-65
emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera]   249   2e-64
emb|CAN63869.1| hypothetical protein VITISV_006090 [Vitis vinifera]   248   3e-64
emb|CAN60812.1| hypothetical protein VITISV_038721 [Vitis vinifera]   234   6e-60
gb|AAO73529.1| gag-pol polyprotein [Glycine max]                      228   3e-58

>emb|CAN61143.1| hypothetical protein VITISV_004318 [Vitis vinifera]
          Length = 324

 Score =  252 bits (644), Expect = 2e-65
 Identities = 119/152 (78%), Positives = 133/152 (87%)
 Frame = -1

Query: 462 YSDADWAGNVDERKSTSGGCFYVGNSLVAWQSKKQNSISLSAAEAEYIAAGSCCAQLL*M 283
           Y+DADWAGNVD+RKSTSGGCFY+GN LVAW SKKQNS+SLS AEAEYIAAGSCC+QLL +
Sbjct: 173 YTDADWAGNVDDRKSTSGGCFYIGNCLVAWMSKKQNSVSLSTAEAEYIAAGSCCSQLLWI 232

Query: 282 KQMLHDYGIQQETMTIFCDNTSAINITKNPVQHSRTKHIDIRHHFIRELVEQKEISVEYV 103
           KQML DYGI Q TM +FCDNTSAINI+KNPV HSRTKHIDIRHHFIR+LVE K +S+EYV
Sbjct: 233 KQMLRDYGIDQGTMVVFCDNTSAINISKNPVLHSRTKHIDIRHHFIRDLVEDKVVSLEYV 292

Query: 102 KTEKQLADLFTKPLDSLRFEFLRMSIGLCVIN 7
            TE Q+AD+ TKPLD  RFE LR SIGLC +N
Sbjct: 293 PTEGQIADILTKPLDVSRFESLRKSIGLCTVN 324


>emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera]
          Length = 956

 Score =  249 bits (636), Expect = 2e-64
 Identities = 117/152 (76%), Positives = 132/152 (86%)
 Frame = -1

Query: 462  YSDADWAGNVDERKSTSGGCFYVGNSLVAWQSKKQNSISLSAAEAEYIAAGSCCAQLL*M 283
            Y+DADWAGN D+RKSTSGGCFY+GN LVAW SKKQNS+SLS AEAEYIAAGSCC+QLL +
Sbjct: 805  YTDADWAGNXDDRKSTSGGCFYIGNCLVAWMSKKQNSVSLSTAEAEYIAAGSCCSQLLWI 864

Query: 282  KQMLHDYGIQQETMTIFCDNTSAINITKNPVQHSRTKHIDIRHHFIRELVEQKEISVEYV 103
            KQML +YGI Q TM +FCDNTSAINI+KNPV HSRTKHIDIRHHFIR+LVE K +S+EYV
Sbjct: 865  KQMLRBYGIDQGTMVVFCDNTSAINISKNPVLHSRTKHIDIRHHFIRDLVEDKVVSLEYV 924

Query: 102  KTEKQLADLFTKPLDSLRFEFLRMSIGLCVIN 7
             TE Q+AD+ TKPLD  RFE LR SIGLC +N
Sbjct: 925  PTEGQIADILTKPLDVSRFESLRKSIGLCXVN 956


>emb|CAN63869.1| hypothetical protein VITISV_006090 [Vitis vinifera]
          Length = 324

 Score =  248 bits (634), Expect = 3e-64
 Identities = 118/152 (77%), Positives = 131/152 (86%)
 Frame = -1

Query: 462 YSDADWAGNVDERKSTSGGCFYVGNSLVAWQSKKQNSISLSAAEAEYIAAGSCCAQLL*M 283
           Y+DADWAGNVD+RKSTSGGCFY+GN LVAW SKKQNSISLS AEAEYIA GSCC+QLL +
Sbjct: 173 YTDADWAGNVDDRKSTSGGCFYIGNCLVAWMSKKQNSISLSIAEAEYIAIGSCCSQLLWI 232

Query: 282 KQMLHDYGIQQETMTIFCDNTSAINITKNPVQHSRTKHIDIRHHFIRELVEQKEISVEYV 103
           KQML DYGI Q TM +FCDNTSAINI+KNPV H RTKHIDIRHHFIR+LVE K +S+EYV
Sbjct: 233 KQMLRDYGIDQGTMVVFCDNTSAINISKNPVLHXRTKHIDIRHHFIRDLVEDKVVSLEYV 292

Query: 102 KTEKQLADLFTKPLDSLRFEFLRMSIGLCVIN 7
            TE Q+AD+ TKPLD  RFE LR SIGLC +N
Sbjct: 293 PTEGQIADILTKPLDVSRFESLRKSIGLCTVN 324


>emb|CAN60812.1| hypothetical protein VITISV_038721 [Vitis vinifera]
          Length = 312

 Score =  234 bits (597), Expect = 6e-60
 Identities = 110/152 (72%), Positives = 128/152 (84%)
 Frame = -1

Query: 462 YSDADWAGNVDERKSTSGGCFYVGNSLVAWQSKKQNSISLSAAEAEYIAAGSCCAQLL*M 283
           Y+DADWA NVD+RK+TSGGCFY+GN LVAW  KKQN +SLS  EAEYIAAGSCC+QLL +
Sbjct: 161 YTDADWARNVDDRKNTSGGCFYIGNCLVAWMIKKQNFVSLSIVEAEYIAAGSCCSQLLWI 220

Query: 282 KQMLHDYGIQQETMTIFCDNTSAINITKNPVQHSRTKHIDIRHHFIRELVEQKEISVEYV 103
           KQML DYGI Q TM +FC NT+AINI+KNPV HSRTKHIDIRHHFI +LVE K +S+EYV
Sbjct: 221 KQMLRDYGIDQGTMVVFCTNTNAINISKNPVLHSRTKHIDIRHHFICDLVEDKVVSLEYV 280

Query: 102 KTEKQLADLFTKPLDSLRFEFLRMSIGLCVIN 7
            TE Q+AD+ TKPLD  RFE LR SIGLC+++
Sbjct: 281 PTETQIADILTKPLDVSRFESLRKSIGLCIVS 312


>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score =  228 bits (582), Expect = 3e-58
 Identities = 103/152 (67%), Positives = 133/152 (87%)
 Frame = -1

Query: 465  GYSDADWAGNVDERKSTSGGCFYVGNSLVAWQSKKQNSISLSAAEAEYIAAGSCCAQLL* 286
            GY DADWAG+ D+RKSTSGGCFY+GN+L++W SKKQN +SLS AEAEYIAAGS C+QL+ 
Sbjct: 1423 GYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYIAAGSSCSQLVW 1482

Query: 285  MKQMLHDYGIQQETMTIFCDNTSAINITKNPVQHSRTKHIDIRHHFIRELVEQKEISVEY 106
            MKQML +Y ++Q+ MT++CDN SAINI+KNPVQHSRTKHIDIRHH+IRELV+ K I++E+
Sbjct: 1483 MKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRELVDDKVITLEH 1542

Query: 105  VKTEKQLADLFTKPLDSLRFEFLRMSIGLCVI 10
            V TE+Q+AD+FTK LD+ +FE LR  +G+C++
Sbjct: 1543 VDTEEQIADIFTKALDAKQFEKLRGKLGICLL 1574


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