BLASTX nr result

ID: Coptis21_contig00024817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024817
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263612.1| PREDICTED: uncharacterized protein LOC100256...   115   4e-24
emb|CAN68394.1| hypothetical protein VITISV_042519 [Vitis vinifera]   114   6e-24
ref|XP_002515807.1| DNA-3-methyladenine glycosylase, putative [R...   113   2e-23
ref|XP_002303720.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_004173920.1| PREDICTED: uncharacterized protein LOC101226...   110   1e-22

>ref|XP_002263612.1| PREDICTED: uncharacterized protein LOC100256507 [Vitis vinifera]
           gi|297738175|emb|CBI27376.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score =  115 bits (288), Expect = 4e-24
 Identities = 52/75 (69%), Positives = 66/75 (88%)
 Frame = -3

Query: 226 AFAGFDADVVANFNEKQITSISTGYGIDLNRVRGVVDNSKRIIEIRREFMTFGKYLWGFV 47
           A +G+DA++V  F+EK+ITSIS  YGIDL++VRGVVDNS RI+EI+REF +F KY+WGFV
Sbjct: 260 ALSGYDAEIVGKFSEKKITSISAYYGIDLSQVRGVVDNSNRILEIKREFGSFHKYIWGFV 319

Query: 46  NNKPIITKYKSCHKI 2
           N+KPI T+YKSCHKI
Sbjct: 320 NHKPITTQYKSCHKI 334


>emb|CAN68394.1| hypothetical protein VITISV_042519 [Vitis vinifera]
          Length = 398

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/75 (69%), Positives = 66/75 (88%)
 Frame = -3

Query: 226 AFAGFDADVVANFNEKQITSISTGYGIDLNRVRGVVDNSKRIIEIRREFMTFGKYLWGFV 47
           AF+G+DA++V  F+EK+ITSIS  YGIDL++VRGVVDNS RI+EI+REF +F KY+WGFV
Sbjct: 260 AFSGYDAEIVGKFSEKKITSISAYYGIDLSQVRGVVDNSNRILEIKREFGSFHKYIWGFV 319

Query: 46  NNKPIITKYKSCHKI 2
           N+KPI T+ KSCHKI
Sbjct: 320 NHKPITTQXKSCHKI 334


>ref|XP_002515807.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
           gi|223545076|gb|EEF46588.1| DNA-3-methyladenine
           glycosylase, putative [Ricinus communis]
          Length = 404

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/75 (68%), Positives = 64/75 (85%)
 Frame = -3

Query: 226 AFAGFDADVVANFNEKQITSISTGYGIDLNRVRGVVDNSKRIIEIRREFMTFGKYLWGFV 47
           AF+GFDA++VA+F EK + SIST YGID+NRVRGVVDNS R++EI++EF +F KY+W FV
Sbjct: 274 AFSGFDAEIVADFTEKHMISISTEYGIDINRVRGVVDNSNRVLEIKKEFGSFSKYIWAFV 333

Query: 46  NNKPIITKYKSCHKI 2
           NNKPI T+YK  HKI
Sbjct: 334 NNKPISTQYKFGHKI 348


>ref|XP_002303720.1| predicted protein [Populus trichocarpa] gi|222841152|gb|EEE78699.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score =  111 bits (278), Expect = 5e-23
 Identities = 49/75 (65%), Positives = 65/75 (86%)
 Frame = -3

Query: 226 AFAGFDADVVANFNEKQITSISTGYGIDLNRVRGVVDNSKRIIEIRREFMTFGKYLWGFV 47
           AF+GFDA++VA F EK+I SIS  YG+D+++VRGVVDNS RI+E++REF +F +YLWG+V
Sbjct: 207 AFSGFDAEIVAKFTEKKIASISAEYGLDISQVRGVVDNSNRILEVKREFGSFDEYLWGYV 266

Query: 46  NNKPIITKYKSCHKI 2
           N+KPI T+YKSC KI
Sbjct: 267 NHKPISTQYKSCQKI 281


>ref|XP_004173920.1| PREDICTED: uncharacterized protein LOC101226717 [Cucumis sativus]
          Length = 397

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/75 (65%), Positives = 65/75 (86%)
 Frame = -3

Query: 226 AFAGFDADVVANFNEKQITSISTGYGIDLNRVRGVVDNSKRIIEIRREFMTFGKYLWGFV 47
           AF+ FD+++VANF++KQ+ SIST YGID+NRVRGVVDN+ RI++I++EF +F KY+WGFV
Sbjct: 244 AFSSFDSEIVANFSDKQMVSISTEYGIDINRVRGVVDNAIRILQIKKEFGSFDKYIWGFV 303

Query: 46  NNKPIITKYKSCHKI 2
           NNKP   +YKS HKI
Sbjct: 304 NNKPFSPQYKSGHKI 318


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