BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024805
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325438.1| cationic amino acid transporter [Populus tri...   110   2e-27
gb|AAN77151.1| fiber protein Fb12 [Gossypium barbadense]              108   8e-26
ref|XP_002525690.1| cationic amino acid transporter, putative [R...   108   1e-25
ref|XP_002319189.1| cationic amino acid transporter [Populus tri...   109   1e-25
ref|XP_003554049.1| PREDICTED: low affinity cationic amino acid ...   107   1e-24

>ref|XP_002325438.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222862313|gb|EEE99819.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 641

 Score =  110 bits (275), Expect(2) = 2e-27
 Identities = 45/59 (76%), Positives = 54/59 (91%)
 Frame = +2

Query: 2   SFGHAGGFLCPFVPLLPIACILVNVYLMINLGAGTWIRVSIWMIIGIFVYLFYGRTHSS 178
           SFGH+GGF+CPFVPLLPI CILVN+YL+INLGA TW RVS+W+I+G+ VY+FYGR HSS
Sbjct: 559 SFGHSGGFICPFVPLLPIVCILVNIYLLINLGAATWTRVSVWLIVGVLVYVFYGRKHSS 617



 Score = 37.0 bits (84), Expect(2) = 2e-27
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +1

Query: 220 LRNAVYVTTSHAEEIYRSSSEHLA 291
           LR+AVYV  +HA+EIYRSS E LA
Sbjct: 618 LRDAVYVPATHADEIYRSSGESLA 641


>gb|AAN77151.1| fiber protein Fb12 [Gossypium barbadense]
          Length = 117

 Score =  108 bits (271), Expect(2) = 8e-26
 Identities = 44/59 (74%), Positives = 54/59 (91%)
 Frame = +2

Query: 2   SFGHAGGFLCPFVPLLPIACILVNVYLMINLGAGTWIRVSIWMIIGIFVYLFYGRTHSS 178
           +FGH GGF+CPFVPLLPI CIL+NVYL+INLGA TW RVS+W++IG+ VY+FYGR+HSS
Sbjct: 35  NFGHTGGFICPFVPLLPIVCILINVYLLINLGAATWARVSVWLLIGVVVYVFYGRSHSS 93



 Score = 33.1 bits (74), Expect(2) = 8e-26
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 220 LRNAVYVTTSHAEEIYRSSSEHLA 291
           L +AVYV  +HA+EIYRSS + LA
Sbjct: 94  LLDAVYVPAAHADEIYRSSGDSLA 117


>ref|XP_002525690.1| cationic amino acid transporter, putative [Ricinus communis]
           gi|223534990|gb|EEF36673.1| cationic amino acid
           transporter, putative [Ricinus communis]
          Length = 643

 Score =  108 bits (270), Expect(2) = 1e-25
 Identities = 45/59 (76%), Positives = 52/59 (88%)
 Frame = +2

Query: 2   SFGHAGGFLCPFVPLLPIACILVNVYLMINLGAGTWIRVSIWMIIGIFVYLFYGRTHSS 178
           SFGH+GGF+CP VPLLPI CIL+N YL+INLGA TW RVS+W+IIG+FVY FYGR HSS
Sbjct: 561 SFGHSGGFICPLVPLLPIICILINTYLLINLGAATWTRVSVWLIIGVFVYAFYGRAHSS 619



 Score = 33.1 bits (74), Expect(2) = 1e-25
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 220 LRNAVYVTTSHAEEIYRSSSEHLA 291
           L +AVYV  +HA+EIYRSS + LA
Sbjct: 620 LLHAVYVPAAHADEIYRSSGDSLA 643


>ref|XP_002319189.1| cationic amino acid transporter [Populus trichocarpa]
           gi|222857565|gb|EEE95112.1| cationic amino acid
           transporter [Populus trichocarpa]
          Length = 640

 Score =  109 bits (272), Expect(2) = 1e-25
 Identities = 44/59 (74%), Positives = 53/59 (89%)
 Frame = +2

Query: 2   SFGHAGGFLCPFVPLLPIACILVNVYLMINLGAGTWIRVSIWMIIGIFVYLFYGRTHSS 178
           +FGH+GGF+CPFVPLLPI C LVN+YL+INLGA TW RVS+W+I+G+ VY FYGRTHSS
Sbjct: 558 TFGHSGGFICPFVPLLPIVCFLVNIYLLINLGAATWTRVSVWLIVGVLVYTFYGRTHSS 616



 Score = 32.0 bits (71), Expect(2) = 1e-25
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = +1

Query: 220 LRNAVYVTTSHAEEIYRSSSEHLA 291
           L +AVYV  +HA+EIYRSS E  A
Sbjct: 617 LLDAVYVPATHADEIYRSSGESSA 640


>ref|XP_003554049.1| PREDICTED: low affinity cationic amino acid transporter 2-like
           isoform 2 [Glycine max]
          Length = 638

 Score =  107 bits (268), Expect(2) = 1e-24
 Identities = 44/59 (74%), Positives = 52/59 (88%)
 Frame = +2

Query: 2   SFGHAGGFLCPFVPLLPIACILVNVYLMINLGAGTWIRVSIWMIIGIFVYLFYGRTHSS 178
           SFGH+GGF CPFVP LP ACIL+N YL+I+LG  TW+RVS+WM+IG+ VYLFYGRTHSS
Sbjct: 556 SFGHSGGFACPFVPFLPAACILINTYLLIDLGVATWLRVSVWMLIGVLVYLFYGRTHSS 614



 Score = 30.4 bits (67), Expect(2) = 1e-24
 Identities = 12/24 (50%), Positives = 20/24 (83%)
 Frame = +1

Query: 220 LRNAVYVTTSHAEEIYRSSSEHLA 291
           L +A+YV +++A+EI+RS + HLA
Sbjct: 615 LLHAIYVPSAYADEIHRSQASHLA 638