BLASTX nr result

ID: Coptis21_contig00024804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024804
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264203.2| PREDICTED: disease resistance protein At4g27...    73   2e-11
emb|CBI22325.3| unnamed protein product [Vitis vinifera]               73   2e-11
emb|CAN65282.1| hypothetical protein VITISV_035565 [Vitis vinifera]    73   2e-11
ref|XP_002270338.2| PREDICTED: uncharacterized protein LOC100248...    73   3e-11
emb|CBI34271.3| unnamed protein product [Vitis vinifera]               73   3e-11

>ref|XP_002264203.2| PREDICTED: disease resistance protein At4g27190-like [Vitis
           vinifera]
          Length = 1545

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 8/106 (7%)
 Frame = +3

Query: 3   TLNLHDCDLLNKVSLLGGMKNLELLSMRRSRIEKLPEEIGNLTNLRSLDLRDAE-LFIVA 179
           TL+L  C L   ++L+G +K L++LS+  S I++LP E+G LTNLR LDL D E L ++ 
Sbjct: 599 TLSLDRCKL-GDIALIGELKKLQVLSLVGSDIQQLPSEMGQLTNLRLLDLNDCEKLEVIP 657

Query: 180 RNSISRLSNLEEL-MVNTFTGW------NDEPNASFAEVASLTHLS 296
           RN +S LS LE L M ++FT W      + E NA  +E+ +L HL+
Sbjct: 658 RNILSSLSRLECLCMKSSFTQWAAEGVSDGESNACLSELNNLRHLT 703


>emb|CBI22325.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 8/106 (7%)
 Frame = +3

Query: 3   TLNLHDCDLLNKVSLLGGMKNLELLSMRRSRIEKLPEEIGNLTNLRSLDLRDAE-LFIVA 179
           TL+L  C L   ++L+G +K L++LS+  S I++LP E+G LTNLR LDL D E L ++ 
Sbjct: 358 TLSLDRCKL-GDIALIGELKKLQVLSLVGSDIQQLPSEMGQLTNLRLLDLNDCEKLEVIP 416

Query: 180 RNSISRLSNLEEL-MVNTFTGW------NDEPNASFAEVASLTHLS 296
           RN +S LS LE L M ++FT W      + E NA  +E+ +L HL+
Sbjct: 417 RNILSSLSRLECLCMKSSFTQWAAEGVSDGESNACLSELNNLRHLT 462


>emb|CAN65282.1| hypothetical protein VITISV_035565 [Vitis vinifera]
          Length = 859

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 8/106 (7%)
 Frame = +3

Query: 3   TLNLHDCDLLNKVSLLGGMKNLELLSMRRSRIEKLPEEIGNLTNLRSLDLRDAE-LFIVA 179
           TL+L  C L   ++L+G +K L++LS+  S I++LP E+G LTNLR LDL D E L ++ 
Sbjct: 588 TLSLDRCKL-GDIALIGELKKLQVLSLVGSDIQQLPSEMGQLTNLRLLDLNDCEKLEVIP 646

Query: 180 RNSISRLSNLEEL-MVNTFTGW------NDEPNASFAEVASLTHLS 296
           RN +S LS LE L M ++FT W      + E NA  +E+ +L HL+
Sbjct: 647 RNILSSLSRLECLCMKSSFTQWAAEGVSDGESNACLSELNNLRHLT 692


>ref|XP_002270338.2| PREDICTED: uncharacterized protein LOC100248775 [Vitis vinifera]
          Length = 2087

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/101 (44%), Positives = 65/101 (64%), Gaps = 3/101 (2%)
 Frame = +3

Query: 3   TLNLHDCDLLNKVSLLGGMKNLELLSMRRSRIEKLPEEIGNLTNLRSLDLRDA-ELFIVA 179
           TL L  C L++ ++L+G +  L++LS+RRS I++LP E+  LTNLR LDL    EL ++ 
Sbjct: 575 TLCLDGCTLVD-IALIGKLTKLQVLSLRRSTIQQLPNEMVQLTNLRLLDLNYCWELEVIP 633

Query: 180 RNSISRLSNLEELMVNTFTGW--NDEPNASFAEVASLTHLS 296
           RN +S LS LE L +N FT W    E NA  +E+  L+ L+
Sbjct: 634 RNILSSLSRLECLYMNRFTQWAIEGESNACLSELNHLSRLT 674



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 43/102 (42%), Positives = 66/102 (64%), Gaps = 4/102 (3%)
 Frame = +3

Query: 3    TLNLHDCDLLNKVSLLGGMKNLELLSMRRSRIEKLPEEIGNLTNLRSLDLRDA-ELFIVA 179
            TL+L  C+L   ++L+G +  LE+LS+  S I++LP+E+  LTNLR LDL    +L ++ 
Sbjct: 1594 TLHLDGCEL-GDIALIGKLTKLEVLSLVGSTIQRLPKEMMQLTNLRLLDLDYCKKLEVIP 1652

Query: 180  RNSISRLSNLEEL-MVNTFTGW--NDEPNASFAEVASLTHLS 296
            RN +S LS LE L M++ FT W    E NA  +E+  L++L+
Sbjct: 1653 RNILSSLSRLECLSMMSGFTKWAVEGESNACLSELNHLSYLT 1694


>emb|CBI34271.3| unnamed protein product [Vitis vinifera]
          Length = 1121

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 48/106 (45%), Positives = 65/106 (61%), Gaps = 8/106 (7%)
 Frame = +3

Query: 3   TLNLHDCDLLNKVSLLGGMKNLELLSMRRSRIEKLPEEIGNLTNLRSLDLRDA-ELFIVA 179
           TL L  C L   ++L+G +K L++LSM  S I++LP E+G LTNLR LDL D  EL ++ 
Sbjct: 479 TLRLDRCKL-GDIALIGELKKLQVLSMVGSDIQQLPSEMGQLTNLRLLDLNDCWELDVIP 537

Query: 180 RNSISRLSNLEEL-MVNTFTGW------NDEPNASFAEVASLTHLS 296
           RN +S LS LE L M  +FT W      + E NA  +E+  L HL+
Sbjct: 538 RNILSSLSRLECLCMKRSFTQWAAEGVSDGESNACLSELNHLRHLT 583


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