BLASTX nr result

ID: Coptis21_contig00024796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024796
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN88207.1| integrase core domain containing protein [Phaseol...   126   2e-27
emb|CAN77210.1| hypothetical protein VITISV_000141 [Vitis vinifera]   125   3e-27
emb|CAN80771.1| hypothetical protein VITISV_027574 [Vitis vinifera]   125   5e-27
emb|CAN60609.1| hypothetical protein VITISV_036599 [Vitis vinifera]   125   5e-27
emb|CAN81139.1| hypothetical protein VITISV_018760 [Vitis vinifera]   124   6e-27

>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/130 (49%), Positives = 84/130 (64%)
 Frame = -1

Query: 405 MIGSGYERDGLYVLNVEKXXXXXXXXXXXSPLQWHRRLGHSSLVKLRQLLPKLSLVSVLE 226
           MIG+G E  GLY L +              P   H RLGH SL K++QL+P LS VS L 
Sbjct: 454 MIGTGCESHGLYQLQISAHVGAIMDS----PSLIHARLGHPSLAKMQQLVPSLSNVSSLS 509

Query: 225 YETCQLGKHHRNTFPSRVDKRSLSPFDVAHTDIWGPFRNKSLSRFFYFVALVDDFSRITW 46
            E+CQ GKH R++FPS V +R+ SPF + H+DIWGP R KS   F YFV  +DD+SR TW
Sbjct: 510 CESCQFGKHIRSSFPSSVSQRASSPFALVHSDIWGPSRIKSNLGFQYFVTFIDDYSRCTW 569

Query: 45  LYMLKDRTEL 16
           ++++K+R+EL
Sbjct: 570 VFLMKNRSEL 579


>emb|CAN77210.1| hypothetical protein VITISV_000141 [Vitis vinifera]
          Length = 1236

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/138 (44%), Positives = 84/138 (60%)
 Frame = -1

Query: 429 NLDLKTKMMIGSGYERDGLYVLNVEKXXXXXXXXXXXSPLQWHRRLGHSSLVKLRQLLPK 250
           ++    K  IG G E  GLY L  +             PL  H RLGH SL K ++++P+
Sbjct: 333 SITFSDKFTIGIGRESQGLYHLTSDSSVAVCISTDA--PLLIHNRLGHHSLSKFQKMVPR 390

Query: 249 LSLVSVLEYETCQLGKHHRNTFPSRVDKRSLSPFDVAHTDIWGPFRNKSLSRFFYFVALV 70
            S +S L YE+CQLGKH R +FP R++ R+ SPF++ H D+WGP R  S   F YFV  +
Sbjct: 391 FSTLSSLPYESCQLGKHTRVSFPKRLNNRAKSPFELVHIDVWGPCRTASTLGFQYFVTFI 450

Query: 69  DDFSRITWLYMLKDRTEL 16
           DD+SR TWL+++K+R EL
Sbjct: 451 DDYSRCTWLFLMKNRAEL 468


>emb|CAN80771.1| hypothetical protein VITISV_027574 [Vitis vinifera]
          Length = 1193

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/136 (47%), Positives = 85/136 (62%)
 Frame = -1

Query: 423 DLKTKMMIGSGYERDGLYVLNVEKXXXXXXXXXXXSPLQWHRRLGHSSLVKLRQLLPKLS 244
           D  T   IG G E  GLY L  +             PL  H RLGH SL K ++++P+ S
Sbjct: 326 DRSTGKTIGIGRESQGLYHLTSDSSXAVCISXDA--PLXIHNRLGHPSLSKFQKMVPRFS 383

Query: 243 LVSVLEYETCQLGKHHRNTFPSRVDKRSLSPFDVAHTDIWGPFRNKSLSRFFYFVALVDD 64
            +S L  E+CQLGKH R +FP R++ R+ SPF++ HTD+WGP R  S   F YFV  +DD
Sbjct: 384 TLSSLPCESCQLGKHTRVSFPKRLNNRAKSPFELVHTDVWGPCRTASTLGFQYFVTFIDD 443

Query: 63  FSRITWLYMLKDRTEL 16
           +SR TWL+++K+R EL
Sbjct: 444 YSRCTWLFLMKNRAEL 459


>emb|CAN60609.1| hypothetical protein VITISV_036599 [Vitis vinifera]
          Length = 1455

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/136 (45%), Positives = 83/136 (61%)
 Frame = -1

Query: 423 DLKTKMMIGSGYERDGLYVLNVEKXXXXXXXXXXXSPLQWHRRLGHSSLVKLRQLLPKLS 244
           D  T   IG G E  GLY L  +             PL  H RLGH SL K ++++P+ S
Sbjct: 548 DXSTGKTIGIGRESQGLYHLTSDSSPAVCISTDA--PLLIHNRLGHPSLSKFQKMVPRFS 605

Query: 243 LVSVLEYETCQLGKHHRNTFPSRVDKRSLSPFDVAHTDIWGPFRNKSLSRFFYFVALVDD 64
            +S L  E+CQLGKH R +FP R++ R+ SPF++ HTD+WGP R  S   F YFV  +DD
Sbjct: 606 TLSSLPCESCQLGKHTRVSFPKRLNNRAKSPFELVHTDVWGPCRTASTLGFQYFVTFIDD 665

Query: 63  FSRITWLYMLKDRTEL 16
           +SR TWL+++K+R EL
Sbjct: 666 YSRCTWLFLMKNRAEL 681


>emb|CAN81139.1| hypothetical protein VITISV_018760 [Vitis vinifera]
          Length = 1403

 Score =  124 bits (312), Expect = 6e-27
 Identities = 63/136 (46%), Positives = 84/136 (61%)
 Frame = -1

Query: 423 DLKTKMMIGSGYERDGLYVLNVEKXXXXXXXXXXXSPLQWHRRLGHSSLVKLRQLLPKLS 244
           D  T   IG G E  GLY L  +             PL  H RLGH SL K ++++P+ S
Sbjct: 521 DRSTGKTIGIGRESQGLYHLTSDSSPXVCISTDA--PLLIHNRLGHPSLSKFQKMVPRFS 578

Query: 243 LVSVLEYETCQLGKHHRNTFPSRVDKRSLSPFDVAHTDIWGPFRNKSLSRFFYFVALVDD 64
            +S L  E+CQLGKH R +FP R++ R+ SPF++ HTD+WGP R  S   F YFV  +DD
Sbjct: 579 TLSSLPCESCQLGKHTRVSFPKRLNNRAKSPFELVHTDVWGPCRTASTLGFQYFVTFIDD 638

Query: 63  FSRITWLYMLKDRTEL 16
           +SR TWL+++K+R EL
Sbjct: 639 YSRCTWLFLMKNRAEL 654


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