BLASTX nr result

ID: Coptis21_contig00024792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024792
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269065.2| PREDICTED: probable receptor-like protein ki...   187   8e-46
ref|XP_002301677.1| predicted protein [Populus trichocarpa] gi|2...   184   5e-45
emb|CBI23773.3| unnamed protein product [Vitis vinifera]              184   8e-45
ref|XP_002269016.1| PREDICTED: probable receptor-like protein ki...   184   8e-45
emb|CAN80735.1| hypothetical protein VITISV_015252 [Vitis vinifera]   184   8e-45

>ref|XP_002269065.2| PREDICTED: probable receptor-like protein kinase At1g11050-like
           [Vitis vinifera]
          Length = 620

 Score =  187 bits (475), Expect = 8e-46
 Identities = 93/127 (73%), Positives = 107/127 (84%)
 Frame = +3

Query: 3   DVYSFGVVVLETMSGRRALDLSSSELVPQAVLITDWAWMLVKSGQLERVLDTSLLKDDDP 182
           DVYSFGVVVLE M GR+ALDLSS    P A LITDWAW +VK+G++E  LD SLLKD+D 
Sbjct: 480 DVYSFGVVVLEIMCGRKALDLSSRS--PGAFLITDWAWSMVKAGKIEEALDASLLKDEDS 537

Query: 183 NNPNPKVIMERFVLVGILCAHVMVALRPTITDALKMLEGDIEIPTIPDRPLPLGDHSFRS 362
           +N NPKVIMERF+LVGILCAHVMVALRPTI+DALKMLEGD+E+P IPDRP+PLG  SF +
Sbjct: 538 SNSNPKVIMERFLLVGILCAHVMVALRPTISDALKMLEGDVEVPAIPDRPVPLGHPSFFT 597

Query: 363 RDNTFSL 383
             NTFS+
Sbjct: 598 DGNTFSI 604


>ref|XP_002301677.1| predicted protein [Populus trichocarpa] gi|222843403|gb|EEE80950.1|
           predicted protein [Populus trichocarpa]
          Length = 652

 Score =  184 bits (468), Expect = 5e-45
 Identities = 93/127 (73%), Positives = 108/127 (85%)
 Frame = +3

Query: 3   DVYSFGVVVLETMSGRRALDLSSSELVPQAVLITDWAWMLVKSGQLERVLDTSLLKDDDP 182
           DVYSFGVVVLE MSGR+ALDLSSS   P+A+LITDWAW LVK+G++E+ LD SLL+  D 
Sbjct: 511 DVYSFGVVVLEIMSGRKALDLSSSGS-PRALLITDWAWSLVKAGKVEQALDASLLRGGDS 569

Query: 183 NNPNPKVIMERFVLVGILCAHVMVALRPTITDALKMLEGDIEIPTIPDRPLPLGDHSFRS 362
           +N NPK IMERFVLVGILCAH+MVALRPTI DALKMLEGDIE+P IPDRP+PLG  SF +
Sbjct: 570 SNSNPKGIMERFVLVGILCAHIMVALRPTILDALKMLEGDIEVPQIPDRPVPLGHPSFHA 629

Query: 363 RDNTFSL 383
             N+FS+
Sbjct: 630 DGNSFSI 636


>emb|CBI23773.3| unnamed protein product [Vitis vinifera]
          Length = 530

 Score =  184 bits (466), Expect = 8e-45
 Identities = 91/127 (71%), Positives = 105/127 (82%)
 Frame = +3

Query: 3   DVYSFGVVVLETMSGRRALDLSSSELVPQAVLITDWAWMLVKSGQLERVLDTSLLKDDDP 182
           DVYSFGVVVLE M GR+ALDLSS    P+A LITDWAW +VK+G+ E  LD SL+KD D 
Sbjct: 380 DVYSFGVVVLEIMCGRKALDLSSRS--PRAFLITDWAWSMVKAGKAEEALDASLVKDGDS 437

Query: 183 NNPNPKVIMERFVLVGILCAHVMVALRPTITDALKMLEGDIEIPTIPDRPLPLGDHSFRS 362
           +N NPK IMERF+LVGILCAHVMVALRPTI+DALKMLEGD+E+P IPDRP+PLG  SF +
Sbjct: 438 SNSNPKAIMERFLLVGILCAHVMVALRPTISDALKMLEGDVEVPAIPDRPVPLGHPSFLT 497

Query: 363 RDNTFSL 383
             NTFS+
Sbjct: 498 DGNTFSI 504


>ref|XP_002269016.1| PREDICTED: probable receptor-like protein kinase At1g11050 [Vitis
           vinifera]
          Length = 658

 Score =  184 bits (466), Expect = 8e-45
 Identities = 91/127 (71%), Positives = 105/127 (82%)
 Frame = +3

Query: 3   DVYSFGVVVLETMSGRRALDLSSSELVPQAVLITDWAWMLVKSGQLERVLDTSLLKDDDP 182
           DVYSFGVVVLE M GR+ALDLSS    P+A LITDWAW +VK+G+ E  LD SL+KD D 
Sbjct: 518 DVYSFGVVVLEIMCGRKALDLSSRS--PRAFLITDWAWSMVKAGKAEEALDASLVKDGDS 575

Query: 183 NNPNPKVIMERFVLVGILCAHVMVALRPTITDALKMLEGDIEIPTIPDRPLPLGDHSFRS 362
           +N NPK IMERF+LVGILCAHVMVALRPTI+DALKMLEGD+E+P IPDRP+PLG  SF +
Sbjct: 576 SNSNPKAIMERFLLVGILCAHVMVALRPTISDALKMLEGDVEVPAIPDRPVPLGHPSFLT 635

Query: 363 RDNTFSL 383
             NTFS+
Sbjct: 636 DGNTFSI 642


>emb|CAN80735.1| hypothetical protein VITISV_015252 [Vitis vinifera]
          Length = 248

 Score =  184 bits (466), Expect = 8e-45
 Identities = 91/127 (71%), Positives = 105/127 (82%)
 Frame = +3

Query: 3   DVYSFGVVVLETMSGRRALDLSSSELVPQAVLITDWAWMLVKSGQLERVLDTSLLKDDDP 182
           DVYSFGVVVLE M GR+ALDLSS    P+A LITDWAW +VK+G+ E  LD SL+KD D 
Sbjct: 95  DVYSFGVVVLEIMCGRKALDLSSRS--PRAFLITDWAWSMVKAGKAEEALDASLVKDGDS 152

Query: 183 NNPNPKVIMERFVLVGILCAHVMVALRPTITDALKMLEGDIEIPTIPDRPLPLGDHSFRS 362
           +N NPK IMERF+LVGILCAHVMVALRPTI+DALKMLEGD+E+P IPDRP+PLG  SF +
Sbjct: 153 SNSNPKAIMERFLLVGILCAHVMVALRPTISDALKMLEGDVEVPAIPDRPVPLGHPSFLT 212

Query: 363 RDNTFSL 383
             NTFS+
Sbjct: 213 DGNTFSI 219


Top