BLASTX nr result

ID: Coptis21_contig00024773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024773
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266530.2| PREDICTED: uncharacterized protein LOC100244...   102   3e-20
emb|CBI15294.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002511500.1| conserved hypothetical protein [Ricinus comm...   100   1e-19
ref|NP_177616.1| nodulin-like and major facilitator domain-conta...    98   6e-19
dbj|BAD94935.1| hypothetical protein [Arabidopsis thaliana]            98   6e-19

>ref|XP_002266530.2| PREDICTED: uncharacterized protein LOC100244916 [Vitis vinifera]
          Length = 559

 Score =  102 bits (255), Expect = 3e-20
 Identities = 49/71 (69%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
 Frame = -3

Query: 269 MESSKWIATVASIWIQCTSGSSYAFGIYSPLLKSSQNYSQSTLDSIAVFKDIGANVGLFS 90
           M SSKWI TVASIWIQCT G SYAFG+YS +LKSSQ+Y Q+TLD+++VFKDIGAN G+ S
Sbjct: 1   MLSSKWITTVASIWIQCTCGGSYAFGVYSSVLKSSQSYDQATLDTVSVFKDIGANAGVLS 60

Query: 89  G-LYTPLLQHR 60
           G LY+ +  HR
Sbjct: 61  GLLYSAVAVHR 71


>emb|CBI15294.3| unnamed protein product [Vitis vinifera]
          Length = 612

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/62 (74%), Positives = 54/62 (87%)
 Frame = -3

Query: 269 MESSKWIATVASIWIQCTSGSSYAFGIYSPLLKSSQNYSQSTLDSIAVFKDIGANVGLFS 90
           M SSKWI TVASIWIQCT G SYAFG+YS +LKSSQ+Y Q+TLD+++VFKDIGAN G+ S
Sbjct: 1   MLSSKWITTVASIWIQCTCGGSYAFGVYSSVLKSSQSYDQATLDTVSVFKDIGANAGVLS 60

Query: 89  GL 84
           GL
Sbjct: 61  GL 62


>ref|XP_002511500.1| conserved hypothetical protein [Ricinus communis]
           gi|223550615|gb|EEF52102.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 551

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/62 (74%), Positives = 54/62 (87%)
 Frame = -3

Query: 269 MESSKWIATVASIWIQCTSGSSYAFGIYSPLLKSSQNYSQSTLDSIAVFKDIGANVGLFS 90
           M  +KWIATVASIWIQC+ G+SY FGIYS +LKSSQNY QSTLD+++VFKDIGAN G+ S
Sbjct: 5   MLKTKWIATVASIWIQCSCGASYTFGIYSSILKSSQNYDQSTLDTVSVFKDIGANAGVIS 64

Query: 89  GL 84
           GL
Sbjct: 65  GL 66


>ref|NP_177616.1| nodulin-like and major facilitator domain-containing protein
           [Arabidopsis thaliana]
           gi|5882744|gb|AAD55297.1|AC008263_28 Strong similarity
           to gb|AF031243 nodule-specific protein (Nlj70) from
           Lotus japonicus and is a member of the PF|00083 Sugar
           (and other) transporter family. EST gb|Z37715 comes from
           this gene [Arabidopsis thaliana]
           gi|332197510|gb|AEE35631.1| nodulin-like and major
           facilitator domain-containing protein [Arabidopsis
           thaliana]
          Length = 533

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/86 (55%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
 Frame = -3

Query: 260 SKWIATVASIWIQCTSGSSYAFGIYSPLLKSSQNYSQSTLDSIAVFKDIGANVGLFSG-L 84
           +KW+A  ASIWIQC SG+SY FGIYS +LKS+Q+Y QSTLD+++VFKDIGAN G+FSG L
Sbjct: 6   TKWVAMTASIWIQCASGASYTFGIYSAVLKSTQSYDQSTLDTVSVFKDIGANAGVFSGLL 65

Query: 83  YTPLLQHRXXXXXXXXXXX*EDWVVV 6
           YT    +R              WVV+
Sbjct: 66  YTYATSNRLRGRGGGIGGAGGPWVVL 91


>dbj|BAD94935.1| hypothetical protein [Arabidopsis thaliana]
          Length = 162

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/86 (55%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
 Frame = -3

Query: 260 SKWIATVASIWIQCTSGSSYAFGIYSPLLKSSQNYSQSTLDSIAVFKDIGANVGLFSG-L 84
           +KW+A  ASIWIQC SG+SY FGIYS +LKS+Q+Y QSTLD+++VFKDIGAN G+FSG L
Sbjct: 6   TKWVAMTASIWIQCASGASYTFGIYSAVLKSTQSYDQSTLDTVSVFKDIGANAGVFSGLL 65

Query: 83  YTPLLQHRXXXXXXXXXXX*EDWVVV 6
           YT    +R              WVV+
Sbjct: 66  YTYATSNRLRGRGGGIGGAGGPWVVL 91