BLASTX nr result

ID: Coptis21_contig00024767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024767
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284450.1| PREDICTED: uncharacterized protein LOC100247...   165   3e-39
ref|NP_001237056.1| uncharacterized protein LOC100306069 [Glycin...   165   4e-39
emb|CBI19040.3| unnamed protein product [Vitis vinifera]              164   9e-39
ref|XP_002302244.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_003601064.1| Glutaredoxin-like protein YDR286C [Medicago ...   161   6e-38

>ref|XP_002284450.1| PREDICTED: uncharacterized protein LOC100247142 [Vitis vinifera]
          Length = 143

 Score =  165 bits (418), Expect = 3e-39
 Identities = 90/127 (70%), Positives = 99/127 (77%), Gaps = 4/127 (3%)
 Frame = +3

Query: 6   MAAVTAISCSIAF-RHRTKLVSF--TPFACSTFSTQS-SSYNLPLRKLVLYSKPGCCLCD 173
           + A    S S+AF R R +   +  TP A S+FS +  SS     RKLVLYSKPGCCLCD
Sbjct: 5   VVAAAGASSSMAFLRTRAQRARWVLTPLASSSFSAKPISSSASSSRKLVLYSKPGCCLCD 64

Query: 174 GLKEKLHAAFSLSAPDSLHDVDLQIRDITSNPEWENAYQYEIPVLARVLSDGTEETLPRL 353
           GLKEKL  AF+LS PDSLHDV+LQIRDITSNPEWE AYQYEIPVLA+VLSDGTEETLPRL
Sbjct: 65  GLKEKLLVAFTLSGPDSLHDVELQIRDITSNPEWEKAYQYEIPVLAKVLSDGTEETLPRL 124

Query: 354 SPRLGVE 374
           SPRLGVE
Sbjct: 125 SPRLGVE 131


>ref|NP_001237056.1| uncharacterized protein LOC100306069 [Glycine max]
           gi|255627443|gb|ACU14066.1| unknown [Glycine max]
          Length = 137

 Score =  165 bits (417), Expect = 4e-39
 Identities = 86/121 (71%), Positives = 91/121 (75%)
 Frame = +3

Query: 12  AVTAISCSIAFRHRTKLVSFTPFACSTFSTQSSSYNLPLRKLVLYSKPGCCLCDGLKEKL 191
           AV   S  +      K+  F PF+       SSS   P RKLVLYSKPGCCLCDGLKEKL
Sbjct: 11  AVAGPSSPLLLLRGQKVFKFRPFS-------SSSSAAPSRKLVLYSKPGCCLCDGLKEKL 63

Query: 192 HAAFSLSAPDSLHDVDLQIRDITSNPEWENAYQYEIPVLARVLSDGTEETLPRLSPRLGV 371
           HAAF LS  DSLHDVDLQIRDIT+NPEWENAYQYEIPVLA+VLSDGTE  LPRLSPRLGV
Sbjct: 64  HAAFLLSGTDSLHDVDLQIRDITTNPEWENAYQYEIPVLAKVLSDGTEVALPRLSPRLGV 123

Query: 372 E 374
           E
Sbjct: 124 E 124


>emb|CBI19040.3| unnamed protein product [Vitis vinifera]
          Length = 129

 Score =  164 bits (414), Expect = 9e-39
 Identities = 83/102 (81%), Positives = 88/102 (86%), Gaps = 1/102 (0%)
 Frame = +3

Query: 72  TPFACSTFSTQS-SSYNLPLRKLVLYSKPGCCLCDGLKEKLHAAFSLSAPDSLHDVDLQI 248
           TP A S+FS +  SS     RKLVLYSKPGCCLCDGLKEKL  AF+LS PDSLHDV+LQI
Sbjct: 16  TPLASSSFSAKPISSSASSSRKLVLYSKPGCCLCDGLKEKLLVAFTLSGPDSLHDVELQI 75

Query: 249 RDITSNPEWENAYQYEIPVLARVLSDGTEETLPRLSPRLGVE 374
           RDITSNPEWE AYQYEIPVLA+VLSDGTEETLPRLSPRLGVE
Sbjct: 76  RDITSNPEWEKAYQYEIPVLAKVLSDGTEETLPRLSPRLGVE 117


>ref|XP_002302244.1| predicted protein [Populus trichocarpa] gi|222843970|gb|EEE81517.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  162 bits (409), Expect = 3e-38
 Identities = 85/117 (72%), Positives = 93/117 (79%), Gaps = 1/117 (0%)
 Frame = +3

Query: 27  SCSIAFRHRTKLVSFTPFA-CSTFSTQSSSYNLPLRKLVLYSKPGCCLCDGLKEKLHAAF 203
           S  +  R + K V FTP A CS+ S+ S       RKL+LYSKPGCCLCDGLKEKL AAF
Sbjct: 15  SIPLLIRKKPKWV-FTPLAFCSSSSSASR------RKLILYSKPGCCLCDGLKEKLQAAF 67

Query: 204 SLSAPDSLHDVDLQIRDITSNPEWENAYQYEIPVLARVLSDGTEETLPRLSPRLGVE 374
            LS P SLHDVDLQ+RDITSNPEWE AYQYEIPVLA+VLSDGTEETLPR+SPRLGVE
Sbjct: 68  LLSGPHSLHDVDLQVRDITSNPEWERAYQYEIPVLAKVLSDGTEETLPRISPRLGVE 124


>ref|XP_003601064.1| Glutaredoxin-like protein YDR286C [Medicago truncatula]
           gi|355490112|gb|AES71315.1| Glutaredoxin-like protein
           YDR286C [Medicago truncatula]
          Length = 196

 Score =  161 bits (407), Expect = 6e-38
 Identities = 82/106 (77%), Positives = 87/106 (82%)
 Frame = +3

Query: 57  KLVSFTPFACSTFSTQSSSYNLPLRKLVLYSKPGCCLCDGLKEKLHAAFSLSAPDSLHDV 236
           +L  F P   ST +T  SS     RKL+LYSKPGCCLCDGLKEKL  AFSLS P SL+DV
Sbjct: 27  RLHKFKPLCFSTTTTSPSS-----RKLILYSKPGCCLCDGLKEKLQDAFSLSGPHSLNDV 81

Query: 237 DLQIRDITSNPEWENAYQYEIPVLARVLSDGTEETLPRLSPRLGVE 374
           DLQIRDITSNPEWE AYQYEIPVLA+VLSDGTEETLPRLSPRLGVE
Sbjct: 82  DLQIRDITSNPEWEKAYQYEIPVLAKVLSDGTEETLPRLSPRLGVE 127


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