BLASTX nr result

ID: Coptis21_contig00024762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024762
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516023.1| homeobox protein, putative [Ricinus communis...    54   1e-12
gb|ADL36724.1| HD domain class transcription factor [Malus x dom...    57   2e-12
ref|XP_002304207.1| predicted protein [Populus trichocarpa] gi|2...    51   2e-11
gb|ABY41242.1| homeodomain protein HOX1 [Gossypium arboreum]           53   2e-11
ref|XP_002284502.1| PREDICTED: homeobox-leucine zipper protein G...    53   5e-11

>ref|XP_002516023.1| homeobox protein, putative [Ricinus communis]
           gi|223544928|gb|EEF46443.1| homeobox protein, putative
           [Ricinus communis]
          Length = 758

 Score = 53.9 bits (128), Expect(2) = 1e-12
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -1

Query: 107 GEPLWIRSVETGREMLSYDEYIRQFRPEMPDN 12
           GEPLWIRSVET RE+L+YDEYI++F  E P N
Sbjct: 289 GEPLWIRSVETDREILNYDEYIKEFNVENPSN 320



 Score = 43.5 bits (101), Expect(2) = 1e-12
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = -3

Query: 210 SLDDYDGIMGLERLKIS*IADQAMEELTKMAT 115
           SLD Y GI GLE+ +I+ IA+QAMEEL KMAT
Sbjct: 256 SLDFYTGIFGLEKSRITEIANQAMEELNKMAT 287


>gb|ADL36724.1| HD domain class transcription factor [Malus x domestica]
          Length = 761

 Score = 56.6 bits (135), Expect(2) = 2e-12
 Identities = 23/32 (71%), Positives = 29/32 (90%)
 Frame = -1

Query: 107 GEPLWIRSVETGREMLSYDEYIRQFRPEMPDN 12
           GEPLW+RSVETGRE+L+YDEYI++F  E+P N
Sbjct: 291 GEPLWVRSVETGREILNYDEYIKEFNIEVPGN 322



 Score = 40.0 bits (92), Expect(2) = 2e-12
 Identities = 21/32 (65%), Positives = 23/32 (71%)
 Frame = -3

Query: 210 SLDDYDGIMGLERLKIS*IADQAMEELTKMAT 115
           SLD Y GI GLE  +I  I +QAMEEL KMAT
Sbjct: 258 SLDFYTGIFGLEESRIMEIVNQAMEELQKMAT 289


>ref|XP_002304207.1| predicted protein [Populus trichocarpa] gi|222841639|gb|EEE79186.1|
           predicted protein [Populus trichocarpa]
          Length = 759

 Score = 51.2 bits (121), Expect(2) = 2e-11
 Identities = 22/32 (68%), Positives = 26/32 (81%)
 Frame = -1

Query: 107 GEPLWIRSVETGREMLSYDEYIRQFRPEMPDN 12
           GEPLWIRSVETGRE+L+YDEY ++F  E   N
Sbjct: 289 GEPLWIRSVETGREILNYDEYTKEFGSENSSN 320



 Score = 42.4 bits (98), Expect(2) = 2e-11
 Identities = 21/32 (65%), Positives = 26/32 (81%)
 Frame = -3

Query: 210 SLDDYDGIMGLERLKIS*IADQAMEELTKMAT 115
           SLD Y GI GL++ +I+ IA+QAMEEL KMAT
Sbjct: 256 SLDFYTGIFGLDKTRITEIANQAMEELKKMAT 287


>gb|ABY41242.1| homeodomain protein HOX1 [Gossypium arboreum]
          Length = 753

 Score = 52.8 bits (125), Expect(2) = 2e-11
 Identities = 21/32 (65%), Positives = 27/32 (84%)
 Frame = -1

Query: 107 GEPLWIRSVETGREMLSYDEYIRQFRPEMPDN 12
           GEPLW+RSVETGRE+L+YDEY+++F  E   N
Sbjct: 283 GEPLWVRSVETGREILNYDEYVKEFSVESSSN 314



 Score = 40.8 bits (94), Expect(2) = 2e-11
 Identities = 21/32 (65%), Positives = 24/32 (75%)
 Frame = -3

Query: 210 SLDDYDGIMGLERLKIS*IADQAMEELTKMAT 115
           SLD Y GI GLE+ +I  I +QAMEEL KMAT
Sbjct: 250 SLDFYTGIFGLEKSRIMEIVNQAMEELQKMAT 281


>ref|XP_002284502.1| PREDICTED: homeobox-leucine zipper protein GLABRA 2-like [Vitis
           vinifera]
          Length = 754

 Score = 52.8 bits (125), Expect(2) = 5e-11
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -1

Query: 107 GEPLWIRSVETGREMLSYDEYIRQFRPEMPDN 12
           GEPLWIRSVETGRE+L+YDEY+R+F  E   N
Sbjct: 285 GEPLWIRSVETGREILNYDEYMREFSVENSGN 316



 Score = 39.3 bits (90), Expect(2) = 5e-11
 Identities = 20/32 (62%), Positives = 24/32 (75%)
 Frame = -3

Query: 210 SLDDYDGIMGLERLKIS*IADQAMEELTKMAT 115
           SL+ Y GI GLE+ +I  I +QAMEEL KMAT
Sbjct: 252 SLEFYTGIFGLEKSRIMEIVNQAMEELKKMAT 283


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