BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024759
         (1371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containi...   640   0.0  
ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   635   e-180
ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containi...   635   e-180
emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]   616   e-174
ref|XP_003605160.1| Pentatricopeptide repeat-containing protein ...   603   e-170

>ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
            mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  640 bits (1650), Expect = 0.0
 Identities = 298/457 (65%), Positives = 384/457 (84%)
 Frame = +1

Query: 1    SNIYIYNAVLHMLVSCGEVELAGNLFDESCLRDLVSWNTVINGYVRSGKGNAALRVFGEM 180
            S+I++ NAV+H+LVSCG+++ A  +FD+SC+RDLVSWN++INGYVR G    AL  + EM
Sbjct: 140  SDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREM 199

Query: 181  QEANVMPDEVTMIGVVSSCAQIEDLKLGKEFHKFIEENGIRLTIPLSNALMDMYVKCGSL 360
            +   + PDEVTMIGVVSSCAQ+EDL LG+E H +IEENG++LT+PL+NALMDMY+KCG+L
Sbjct: 200  KVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNL 259

Query: 361  EPAQVLFRKMTRKTMVTWTTMLVGFARCGFLDSARNLFNEMPERDAVSWNALISSYVHAE 540
            E A+ LF  MT KTMV+WTTM+VG+A+ G LD A  LF+EMP++D V WNA+I  YVHA 
Sbjct: 260  ESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHAN 319

Query: 541  HARDALALFHEMQAMNVKPNEVTMVSLLSACSQLGALDTGEWIHHYIDKHKILLNVTLGT 720
              ++ALALF+EMQAMN+ P+EVTMVS LSACSQLGALD G WIHHYI+KH++ LNV LGT
Sbjct: 320  RGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGT 379

Query: 721  ALVDMYAKCGNIAKAVKVFREIPQRNSLTWTSVINGLALHGHAKDSISFFLEMISIGFVP 900
            AL+DMYAKCG I KA++VF+E+P RNSLTWT++I+GLALHG+A  +I++F EMI    +P
Sbjct: 380  ALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMP 439

Query: 901  DEVTFIGVLSACCHAGFVDEGRQFFAKMSSEYNISPKMKHYSCMVDLLGRADLLSEAEQL 1080
            DEVTF+G+LSACCH G V+EGR++F++MSS++N+SPK+KHYSCMVDLLGRA LL EAE+L
Sbjct: 440  DEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEEL 499

Query: 1081 IKTMPMEPDTVILGALFFACKNHGNVAIGERVAAKLLELDPHDGGNYVQLANMYLEANMR 1260
            IK+MP+E D V+ GALFFAC+ HGNV +GER A+KLL++DPHD G YV LANMY EA M 
Sbjct: 500  IKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMW 559

Query: 1261 EKAEKVRMMMWEKGLDKTPGCSSIEVDGAIHEFVVRD 1371
            ++A K R +M ++G++KTPGCSSIEV+G ++EF+VRD
Sbjct: 560  KEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRD 596



 Score =  152 bits (383), Expect = 3e-34
 Identities = 102/387 (26%), Positives = 182/387 (47%), Gaps = 35/387 (9%)
 Frame = +1

Query: 106  SWNTVINGYVRSGKGNAALRVFGEMQEAN-VMPDEVTMIGVVSSCAQIEDLKLGKEFHKF 282
            SWN  I G++ S     A+ ++  + + +   PD  T   +  +CA++  +++G E    
Sbjct: 73   SWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGH 132

Query: 283  IEENGIRLTIPLSNALMDMYVKCGSLEPAQVLFRKMTRKTMVTWTTMLVGFARCGFLDSA 462
            +   G    I +SNA++ + V CG L+ A+ +F K   + +V+W +M+ G+ R G+    
Sbjct: 133  VLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGW---- 188

Query: 463  RNLFNEMPERDAVSWNALISSYVHAEHARDALALFHEMQAMNVKPNEVTMVSLLSACSQL 642
                                       A +AL  + EM+   +KP+EVTM+ ++S+C+QL
Sbjct: 189  ---------------------------AYEALNFYREMKVEGIKPDEVTMIGVVSSCAQL 221

Query: 643  GALDTGEWIHHYIDKHKILLNVTLGTALVDMYAKCGNIAKAVKVFREIPQRNSLTWTSVI 822
              LD G   H YI+++ + L V L  AL+DMY KCGN+  A K+F  +  +  ++WT+++
Sbjct: 222  EDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMV 281

Query: 823  NGLALHG----------------------------HA---KDSISFFLEMISIGFVPDEV 909
             G A  G                            HA   K++++ F EM ++   PDEV
Sbjct: 282  VGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEV 341

Query: 910  TFIGVLSACCHAGFVDEGRQFFAKMSSEYNISPKMKHYSCMVDLLGRADLLSEAEQLIKT 1089
            T +  LSAC   G +D G  +      ++ +S  +   + ++D+  +   +++A Q+ + 
Sbjct: 342  TMVSCLSACSQLGALDVG-IWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQE 400

Query: 1090 MPMEPD---TVILGALFFACKNHGNVA 1161
            +P       T I+  L      HG +A
Sbjct: 401  LPGRNSLTWTAIISGLALHGNAHGAIA 427


>ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g22410, mitochondrial-like [Cucumis sativus]
          Length = 681

 Score =  635 bits (1638), Expect = e-180
 Identities = 294/457 (64%), Positives = 382/457 (83%)
 Frame = +1

Query: 1    SNIYIYNAVLHMLVSCGEVELAGNLFDESCLRDLVSWNTVINGYVRSGKGNAALRVFGEM 180
            S+++++NA++H+LVSCGE+  A  LFDESC+RDLVSWN++INGYVR G  + A  ++ +M
Sbjct: 188  SDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKM 247

Query: 181  QEANVMPDEVTMIGVVSSCAQIEDLKLGKEFHKFIEENGIRLTIPLSNALMDMYVKCGSL 360
             E NVMPDEVTMIGVVS+ AQ+E+L LG++ H+ IEE G+ LT+PL+NALMDMY+KC ++
Sbjct: 248  GELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNI 307

Query: 361  EPAQVLFRKMTRKTMVTWTTMLVGFARCGFLDSARNLFNEMPERDAVSWNALISSYVHAE 540
            E A++LF  MT+KT+V+WTTM++G+A+ G L+SA  LFNEMPE+D V WNALI  +V A+
Sbjct: 308  EAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAK 367

Query: 541  HARDALALFHEMQAMNVKPNEVTMVSLLSACSQLGALDTGEWIHHYIDKHKILLNVTLGT 720
             +++ALALFHEMQA +V P+++T+V+ LSACSQLGALD G W+HHY+DKH + +NV LGT
Sbjct: 368  RSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGT 427

Query: 721  ALVDMYAKCGNIAKAVKVFREIPQRNSLTWTSVINGLALHGHAKDSISFFLEMISIGFVP 900
            ALVDMYAKCGNI KA++VF E+P RNSLTWT++I GLALHG    +IS+F EMISIG VP
Sbjct: 428  ALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVP 487

Query: 901  DEVTFIGVLSACCHAGFVDEGRQFFAKMSSEYNISPKMKHYSCMVDLLGRADLLSEAEQL 1080
            DE+TFIGVLSACCH G VD+GR +F +M+S+Y ISPK+KHYSC+VDLLGRA  L EAE+L
Sbjct: 488  DEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEEL 547

Query: 1081 IKTMPMEPDTVILGALFFACKNHGNVAIGERVAAKLLELDPHDGGNYVQLANMYLEANMR 1260
            I++MP EPD V+ GALFF  + HGNV +GER A+KLLELDPHDGG YV LANMY +ANM 
Sbjct: 548  IRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMW 607

Query: 1261 EKAEKVRMMMWEKGLDKTPGCSSIEVDGAIHEFVVRD 1371
            E+A KVR MM E+G++KTPGCSSIE++G +++F++RD
Sbjct: 608  EQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRD 644



 Score =  136 bits (343), Expect = 1e-29
 Identities = 93/362 (25%), Positives = 163/362 (45%), Gaps = 32/362 (8%)
 Frame = +1

Query: 106  SWNTVINGYVRSGKG-NAALRVFGEMQEANVMPDEVTMIGVVSSCAQIEDLKLGKEFHKF 282
            SWN  I GYV S    NA L     +++ + +PD  T   +   CA         E    
Sbjct: 121  SWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGH 180

Query: 283  IEENGIRLTIPLSNALMDMYVKCGSLEPAQVLFRKMTRKTMVTWTTMLVGFARCGFLDSA 462
            + + G    + + NA++ + V CG L  A+ LF +   + +V+W +++ G+ RCG  D  
Sbjct: 181  VIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLAD-- 238

Query: 463  RNLFNEMPERDAVSWNALISSYVHAEHARDALALFHEMQAMNVKPNEVTMVSLLSACSQL 642
                                         +A  L+++M  +NV P+EVTM+ ++SA +QL
Sbjct: 239  -----------------------------EAFDLYYKMGELNVMPDEVTMIGVVSASAQL 269

Query: 643  GALDTGEWIHHYIDKHKILLNVTLGTALVDMYAKCGNI---------------------- 756
              L  G  +H  I++  + L V L  AL+DMY KC NI                      
Sbjct: 270  ENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMV 329

Query: 757  ---------AKAVKVFREIPQRNSLTWTSVINGLALHGHAKDSISFFLEMISIGFVPDEV 909
                       AV++F E+P+++ + W ++I G      +K++++ F EM +    PD++
Sbjct: 330  IGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKI 389

Query: 910  TFIGVLSACCHAGFVDEGRQFFAKMSSEYNISPKMKHYSCMVDLLGRADLLSEAEQLIKT 1089
            T +  LSAC   G +D G  +      ++N++  +   + +VD+  +   + +A Q+ + 
Sbjct: 390  TVVNCLSACSQLGALDVG-IWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEE 448

Query: 1090 MP 1095
            MP
Sbjct: 449  MP 450


>ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
            mitochondrial-like [Cucumis sativus]
          Length = 681

 Score =  635 bits (1638), Expect = e-180
 Identities = 294/457 (64%), Positives = 382/457 (83%)
 Frame = +1

Query: 1    SNIYIYNAVLHMLVSCGEVELAGNLFDESCLRDLVSWNTVINGYVRSGKGNAALRVFGEM 180
            S+++++NA++H+LVSCGE+  A  LFDESC+RDLVSWN++INGYVR G  + A  ++ +M
Sbjct: 188  SDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKM 247

Query: 181  QEANVMPDEVTMIGVVSSCAQIEDLKLGKEFHKFIEENGIRLTIPLSNALMDMYVKCGSL 360
             E NVMPDEVTMIGVVS+ AQ+E+L LG++ H+ IEE G+ LT+PL+NALMDMY+KC ++
Sbjct: 248  GELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNI 307

Query: 361  EPAQVLFRKMTRKTMVTWTTMLVGFARCGFLDSARNLFNEMPERDAVSWNALISSYVHAE 540
            E A++LF  MT+KT+V+WTTM++G+A+ G L+SA  LFNEMPE+D V WNALI  +V A+
Sbjct: 308  EAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAK 367

Query: 541  HARDALALFHEMQAMNVKPNEVTMVSLLSACSQLGALDTGEWIHHYIDKHKILLNVTLGT 720
             +++ALALFHEMQA +V P+++T+V+ LSACSQLGALD G W+HHY+DKH + +NV LGT
Sbjct: 368  RSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGT 427

Query: 721  ALVDMYAKCGNIAKAVKVFREIPQRNSLTWTSVINGLALHGHAKDSISFFLEMISIGFVP 900
            ALVDMYAKCGNI KA++VF E+P RNSLTWT++I GLALHG    +IS+F EMISIG VP
Sbjct: 428  ALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLVP 487

Query: 901  DEVTFIGVLSACCHAGFVDEGRQFFAKMSSEYNISPKMKHYSCMVDLLGRADLLSEAEQL 1080
            DE+TFIGVLSACCH G VD+GR +F +M+S+Y ISPK+KHYSC+VDLLGRA  L EAE+L
Sbjct: 488  DEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEEL 547

Query: 1081 IKTMPMEPDTVILGALFFACKNHGNVAIGERVAAKLLELDPHDGGNYVQLANMYLEANMR 1260
            I++MP EPD V+ GALFF  + HGNV +GER A+KLLELDPHDGG YV LANMY +ANM 
Sbjct: 548  IRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANMW 607

Query: 1261 EKAEKVRMMMWEKGLDKTPGCSSIEVDGAIHEFVVRD 1371
            E+A KVR MM E+G++KTPGCSSIE++G +++F++RD
Sbjct: 608  EQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRD 644



 Score =  137 bits (344), Expect = 9e-30
 Identities = 93/365 (25%), Positives = 165/365 (45%), Gaps = 32/365 (8%)
 Frame = +1

Query: 97   DLVSWNTVINGYVRSGKG-NAALRVFGEMQEANVMPDEVTMIGVVSSCAQIEDLKLGKEF 273
            ++ SWN  I GYV S    NA L     +++ + +PD  T   +   CA         E 
Sbjct: 118  NVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEI 177

Query: 274  HKFIEENGIRLTIPLSNALMDMYVKCGSLEPAQVLFRKMTRKTMVTWTTMLVGFARCGFL 453
               + + G    + + NA++ + V CG L  A+ LF +   + +V+W +++ G+ RCG  
Sbjct: 178  LGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLA 237

Query: 454  DSARNLFNEMPERDAVSWNALISSYVHAEHARDALALFHEMQAMNVKPNEVTMVSLLSAC 633
            D                               +A  L+++M  +NV P+EVTM+ ++SA 
Sbjct: 238  D-------------------------------EAFDLYYKMGELNVMPDEVTMIGVVSAS 266

Query: 634  SQLGALDTGEWIHHYIDKHKILLNVTLGTALVDMYAKCGNI------------------- 756
            +QL  L  G  +H  I++  + L V L  AL+DMY KC NI                   
Sbjct: 267  AQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWT 326

Query: 757  ------------AKAVKVFREIPQRNSLTWTSVINGLALHGHAKDSISFFLEMISIGFVP 900
                          AV++F E+P+++ + W ++I G      +K++++ F EM +    P
Sbjct: 327  TMVIGYAKFGLLESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAP 386

Query: 901  DEVTFIGVLSACCHAGFVDEGRQFFAKMSSEYNISPKMKHYSCMVDLLGRADLLSEAEQL 1080
            D++T +  LSAC   G +D G  +      ++N++  +   + +VD+  +   + +A Q+
Sbjct: 387  DKITVVNCLSACSQLGALDVG-IWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQV 445

Query: 1081 IKTMP 1095
             + MP
Sbjct: 446  FEEMP 450


>emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
          Length = 599

 Score =  616 bits (1589), Expect = e-174
 Identities = 291/457 (63%), Positives = 374/457 (81%)
 Frame = +1

Query: 1    SNIYIYNAVLHMLVSCGEVELAGNLFDESCLRDLVSWNTVINGYVRSGKGNAALRVFGEM 180
            S+I++ NAV+H+LVSCG+++ A  +FD+SC+RDLVSWN++INGYVR G    AL  + EM
Sbjct: 112  SDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREM 171

Query: 181  QEANVMPDEVTMIGVVSSCAQIEDLKLGKEFHKFIEENGIRLTIPLSNALMDMYVKCGSL 360
            +   + PDEVTMIGVVSSCAQ+EDL LG+E H +IEENG++LT+PL+NALMDMY+KCG+L
Sbjct: 172  KVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNL 231

Query: 361  EPAQVLFRKMTRKTMVTWTTMLVGFARCGFLDSARNLFNEMPERDAVSWNALISSYVHAE 540
            E A+ LF  MT KTMV+WTTML               F+EMP++D V WNA+I  YVHA 
Sbjct: 232  ESARKLFDSMTNKTMVSWTTML---------------FDEMPDKDVVPWNAMIGGYVHAN 276

Query: 541  HARDALALFHEMQAMNVKPNEVTMVSLLSACSQLGALDTGEWIHHYIDKHKILLNVTLGT 720
              ++ALALF+EMQAMN+ P+EVTMVS LSACSQLGALD G WIHHYI+KH++ LNV LGT
Sbjct: 277  RGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGT 336

Query: 721  ALVDMYAKCGNIAKAVKVFREIPQRNSLTWTSVINGLALHGHAKDSISFFLEMISIGFVP 900
            AL+DMYAKCG I KA++VF+E+P RNSLTWT++I+GLALHG+A  +I++F EMI    +P
Sbjct: 337  ALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMP 396

Query: 901  DEVTFIGVLSACCHAGFVDEGRQFFAKMSSEYNISPKMKHYSCMVDLLGRADLLSEAEQL 1080
            DEVTF+G+LSACCH G V+EGR++F++MSS++N+SPK+KHYSCMVDLLGRA LL EAE+L
Sbjct: 397  DEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEEL 456

Query: 1081 IKTMPMEPDTVILGALFFACKNHGNVAIGERVAAKLLELDPHDGGNYVQLANMYLEANMR 1260
            IK+MP+E D V+ GALFFAC+ HGNV +GER A+KLL++DPHD G YV LANMY EA M 
Sbjct: 457  IKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMW 516

Query: 1261 EKAEKVRMMMWEKGLDKTPGCSSIEVDGAIHEFVVRD 1371
            ++A K R +M ++G++KTPGCSSIEV+G ++EF+VRD
Sbjct: 517  KEAGKXRKLMRQRGVEKTPGCSSIEVNGIVYEFIVRD 553



 Score =  156 bits (395), Expect = 1e-35
 Identities = 100/372 (26%), Positives = 179/372 (48%), Gaps = 20/372 (5%)
 Frame = +1

Query: 106  SWNTVINGYVRSGKGNAALRVFGEMQEAN-VMPDEVTMIGVVSSCAQIEDLKLGKEFHKF 282
            SWN  I G++ S     A+ ++  + + +   PD  T   +  +CA++  +++G E    
Sbjct: 45   SWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGH 104

Query: 283  IEENGIRLTIPLSNALMDMYVKCGSLEPAQVLFRKMTRKTMVTWTTMLVGFARCGFLDSA 462
            +   G    I +SNA++ + V CG L+ A+ +F K   + +V+W +M+ G+ R G+    
Sbjct: 105  VLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGW---- 160

Query: 463  RNLFNEMPERDAVSWNALISSYVHAEHARDALALFHEMQAMNVKPNEVTMVSLLSACSQL 642
                                       A +AL  + EM+   +KP+EVTM+ ++S+C+QL
Sbjct: 161  ---------------------------AYEALNFYREMKVEGIKPDEVTMIGVVSSCAQL 193

Query: 643  GALDTGEWIHHYIDKHKILLNVTLGTALVDMYAKCGNIAKAVK----------------V 774
              LD G   H YI+++ + L V L  AL+DMY KCGN+  A K                +
Sbjct: 194  EDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTML 253

Query: 775  FREIPQRNSLTWTSVINGLALHGHAKDSISFFLEMISIGFVPDEVTFIGVLSACCHAGFV 954
            F E+P ++ + W ++I G       K++++ F EM ++   PDEVT +  LSAC   G +
Sbjct: 254  FDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGAL 313

Query: 955  DEGRQFFAKMSSEYNISPKMKHYSCMVDLLGRADLLSEAEQLIKTMPMEPD---TVILGA 1125
            D G  +      ++ +S  +   + ++D+  +   +++A Q+ + +P       T I+  
Sbjct: 314  DVG-IWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISG 372

Query: 1126 LFFACKNHGNVA 1161
            L      HG +A
Sbjct: 373  LALHGNAHGAIA 384


>ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355506215|gb|AES87357.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1026

 Score =  603 bits (1556), Expect = e-170
 Identities = 278/456 (60%), Positives = 375/456 (82%)
 Frame = +1

Query: 4    NIYIYNAVLHMLVSCGEVELAGNLFDESCLRDLVSWNTVINGYVRSGKGNAALRVFGEMQ 183
            +I+++NA + ML+SCGE+ +A ++F++S +RDLV+WN++I G V+ G    A++++ EM+
Sbjct: 192  DIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEME 251

Query: 184  EANVMPDEVTMIGVVSSCAQIEDLKLGKEFHKFIEENGIRLTIPLSNALMDMYVKCGSLE 363
               V P+E+TMIG++SSC+Q++DL LGKEFH +I+E+G+  TIPL+NALMDMYVKCG L 
Sbjct: 252  AEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELL 311

Query: 364  PAQVLFRKMTRKTMVTWTTMLVGFARCGFLDSARNLFNEMPERDAVSWNALISSYVHAEH 543
             A+VLF  M +KT+V+WTTM++G+AR GFLD AR +  ++PE+  V WNA+IS  V A+ 
Sbjct: 312  TARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQ 371

Query: 544  ARDALALFHEMQAMNVKPNEVTMVSLLSACSQLGALDTGEWIHHYIDKHKILLNVTLGTA 723
             ++ALALFHEMQ   ++P++VTMV+ LSACSQLGALD G WIHHYI++HK+ ++V LGTA
Sbjct: 372  GKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTA 431

Query: 724  LVDMYAKCGNIAKAVKVFREIPQRNSLTWTSVINGLALHGHAKDSISFFLEMISIGFVPD 903
            LVDMYAKCGNIA+A++VF EIPQRN LTWT+VI GLALHG+A+D++S+F +MI IG VPD
Sbjct: 432  LVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPD 491

Query: 904  EVTFIGVLSACCHAGFVDEGRQFFAKMSSEYNISPKMKHYSCMVDLLGRADLLSEAEQLI 1083
            E+TF+GVLSACCH G V+EGR++F++MSS++N+SPK+KHYSCMVDLLGRA  L EAE+L+
Sbjct: 492  EITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELV 551

Query: 1084 KTMPMEPDTVILGALFFACKNHGNVAIGERVAAKLLELDPHDGGNYVQLANMYLEANMRE 1263
            K MPM  D  +LGALFFAC+ +GNV IGER A KLLE+DP D GNYV LA+MY EA M +
Sbjct: 552  KNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWK 611

Query: 1264 KAEKVRMMMWEKGLDKTPGCSSIEVDGAIHEFVVRD 1371
            +A   R +M +KG++KTPGCS +E++G +HEFVVRD
Sbjct: 612  EARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRD 647



 Score = 77.8 bits (190), Expect = 6e-12
 Identities = 68/294 (23%), Positives = 124/294 (42%), Gaps = 11/294 (3%)
 Frame = +1

Query: 274  HKFIEENGIRLTIPLSNALMDMYVKCGSLEPAQVLFRKMTRKTMVT---WTTMLVGFARC 444
            H F+ EN           L+ +  +C SL   + +  +M    ++      + LV F   
Sbjct: 52   HSFVREN----------PLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCAL 101

Query: 445  GF---LDSARNLFNEMPERDAVSWNALISSYVHAEHARDALALFHEMQ-AMNVKPNEVTM 612
                 LD    +   + E +  SWNA I  YV +        L+  M     +KP+  T 
Sbjct: 102  SESKELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTY 161

Query: 613  VSLLSACSQLGALDTGEWIHHYIDKHKILLNVTLGTALVDMYAKCGNIAKAVKVFREIPQ 792
              LL  C    +   G  +  ++ K     ++ +  A + M   CG ++ A  VF +   
Sbjct: 162  PLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRV 221

Query: 793  RNSLTWTSVINGLALHGHAKDSISFFLEMISIGFVPDEVTFIGVLSACCHAGFVDEGRQF 972
            R+ +TW S+I G    G A ++I  + EM +    P+E+T IG++S+C     ++ G++F
Sbjct: 222  RDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEF 281

Query: 973  FAKMSSEYNISPKMKHYSCMVDLLGRADLLSEAEQLIKTMPMEP----DTVILG 1122
               +  E+ +   +   + ++D+  +   L  A  L   M  +      T++LG
Sbjct: 282  HCYI-KEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLG 334