BLASTX nr result

ID: Coptis21_contig00024755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024755
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266379.2| PREDICTED: uncharacterized protein LOC100254...   141   5e-32
ref|XP_002307308.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_002532382.1| methylmalonate-semialdehyde dehydrogenase, p...   136   2e-30
ref|XP_002518342.1| methylmalonate-semialdehyde dehydrogenase, p...   136   2e-30
ref|XP_002266616.2| PREDICTED: methylmalonate-semialdehyde dehyd...   134   1e-29

>ref|XP_002266379.2| PREDICTED: uncharacterized protein LOC100254417 [Vitis vinifera]
          Length = 1040

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/129 (51%), Positives = 89/129 (68%)
 Frame = -2

Query: 391 LLPPPSKIFSSREDLLEYVHEFTFSQGYATSIKDSKKDRHVKIGCDRGGTFRNRSNISIE 212
           +LPPP   F  REDL+++V +F  +QGY  +IK S+KDR V +GCDRGG +RNR  I   
Sbjct: 15  MLPPPPGTFQDREDLIKHVRDFGANQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIEES 74

Query: 211 ERKKKTSSRLISCPFDIRGNKQHDGSWILRVKDSAHNHEASKDMSGHPSFRRLSKDEFSR 32
           +RK+K  SRLI+CPF+  G K+ D  W+L +K+  HNHE  KDMS HP  RR S+DE  +
Sbjct: 75  KRKRKACSRLINCPFEAIGKKE-DDLWVLTIKNGEHNHEPFKDMSQHPYSRRFSEDEVRQ 133

Query: 31  VKEMTLSGI 5
           +K MT +GI
Sbjct: 134 IKLMTDAGI 142


>ref|XP_002307308.1| predicted protein [Populus trichocarpa] gi|222856757|gb|EEE94304.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  141 bits (356), Expect = 5e-32
 Identities = 64/130 (49%), Positives = 91/130 (70%)
 Frame = -2

Query: 394 KLLPPPSKIFSSREDLLEYVHEFTFSQGYATSIKDSKKDRHVKIGCDRGGTFRNRSNISI 215
           K+LPP S +F  RE+L++YV +F  +QGY  +IK S++DR V +GCDRGG +RNR  I  
Sbjct: 14  KMLPPESGVFQDREELIKYVRDFGANQGYVVTIKKSRRDRRVILGCDRGGIYRNRRKIDE 73

Query: 214 EERKKKTSSRLISCPFDIRGNKQHDGSWILRVKDSAHNHEASKDMSGHPSFRRLSKDEFS 35
            +RK+K  SRLI+CPF+  G K+ D  W+L +K+  HNHE  KDMS HP  RR S++E  
Sbjct: 74  SQRKRKACSRLINCPFEAIGKKE-DDMWVLNIKNGEHNHEPLKDMSEHPYSRRFSEEEVR 132

Query: 34  RVKEMTLSGI 5
           +++ MT +G+
Sbjct: 133 QIRMMTEAGV 142


>ref|XP_002532382.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus
           communis] gi|223527906|gb|EEF29994.1|
           methylmalonate-semialdehyde dehydrogenase, putative
           [Ricinus communis]
          Length = 1050

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/130 (50%), Positives = 88/130 (67%)
 Frame = -2

Query: 394 KLLPPPSKIFSSREDLLEYVHEFTFSQGYATSIKDSKKDRHVKIGCDRGGTFRNRSNISI 215
           ++LPP    F  RE+L++YV +F  +QGY  +IK S+KDR V +GCDRGG +RNR  I  
Sbjct: 14  QMLPPEPGTFQDREELIKYVRDFGANQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIEE 73

Query: 214 EERKKKTSSRLISCPFDIRGNKQHDGSWILRVKDSAHNHEASKDMSGHPSFRRLSKDEFS 35
            +RK+K  SRLI+CPF+  G K+ D  WIL VK+  HNHE  KDM  HP  RR S++E  
Sbjct: 74  SQRKRKACSRLINCPFEAIGKKE-DDLWILTVKNGDHNHEPLKDMLEHPYSRRFSEEEVR 132

Query: 34  RVKEMTLSGI 5
           ++K MT +G+
Sbjct: 133 QIKMMTEAGV 142


>ref|XP_002518342.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus
           communis] gi|223542562|gb|EEF44102.1|
           methylmalonate-semialdehyde dehydrogenase, putative
           [Ricinus communis]
          Length = 709

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/135 (48%), Positives = 92/135 (68%), Gaps = 5/135 (3%)
 Frame = -2

Query: 394 KLLPPPSKIFSSREDLLEYVHEFTFSQGYATSIKDSKKDRHVKIGCDRGGTFRNRSNISI 215
           ++LPPP   F  RE+L+++V +F  SQGY  +IK SK+DR V +GCDRGG +RNR   + 
Sbjct: 14  QMLPPPPGTFIDREELIQHVGDFAVSQGYVVTIKQSKRDRVVILGCDRGGVYRNRRKAAE 73

Query: 214 EE-----RKKKTSSRLISCPFDIRGNKQHDGSWILRVKDSAHNHEASKDMSGHPSFRRLS 50
           E      RK+K+ SRL +CPF+  G K+ DG WIL +K+  HNHE  KD+S HP+ RR S
Sbjct: 74  ESSAERIRKRKSGSRLTNCPFECVG-KKDDGLWILTIKNGTHNHEPLKDISEHPTARRFS 132

Query: 49  KDEFSRVKEMTLSGI 5
           ++E   +KEMT +G+
Sbjct: 133 EEEIRLIKEMTEAGL 147


>ref|XP_002266616.2| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating],
           mitochondrial-like [Vitis vinifera]
          Length = 712

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/135 (46%), Positives = 92/135 (68%), Gaps = 5/135 (3%)
 Frame = -2

Query: 394 KLLPPPSKIFSSREDLLEYVHEFTFSQGYATSIKDSKKDRHVKIGCDRGGTFRNRSNISI 215
           ++LPPP   F  RE+L+++V +F  SQGY  +IK SKKD+ V +GCDRGG +RNR  +  
Sbjct: 14  QMLPPPPGSFIDREELIQHVGDFALSQGYVVTIKQSKKDKVVVLGCDRGGVYRNRRKLVD 73

Query: 214 EE-----RKKKTSSRLISCPFDIRGNKQHDGSWILRVKDSAHNHEASKDMSGHPSFRRLS 50
           E      RK+KT SRL +CPF++ G K+ DG W+L +K+  HNH+  +D+S HPS RR +
Sbjct: 74  ESSAEQVRKRKTGSRLTNCPFEVVGKKE-DGLWVLAIKNGEHNHDPIRDISEHPSSRRFT 132

Query: 49  KDEFSRVKEMTLSGI 5
           + E   +K+MT +G+
Sbjct: 133 EREVLLIKDMTEAGL 147


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