BLASTX nr result

ID: Coptis21_contig00024740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024740
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30366.3| unnamed protein product [Vitis vinifera]              397   e-108
ref|XP_002275518.1| PREDICTED: UPF0554 protein C2orf43 homolog [...   397   e-108
gb|AFK48327.1| unknown [Lotus japonicus]                              386   e-105
ref|NP_001239760.1| uncharacterized protein LOC100790552 [Glycin...   385   e-105
ref|XP_002322800.1| predicted protein [Populus trichocarpa] gi|2...   382   e-104

>emb|CBI30366.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  397 bits (1021), Expect = e-108
 Identities = 184/295 (62%), Positives = 233/295 (78%)
 Frame = -2

Query: 913 NLRLCNVSGFTTELLELKAQNPSFHVLVIPGNPGVVSFYKEFVERVYEMLEGCASVTAIG 734
           N RLC+VSG+TTELL+L A+ P  HVL IPGNPG+VSFYK+FVE +YE+L G  SVTAIG
Sbjct: 68  NFRLCSVSGYTTELLDLHAEEPKLHVLFIPGNPGIVSFYKDFVESLYELLGGSVSVTAIG 127

Query: 733 HIGHTRKDWERRRLFSLQDQIDHKVDYIKHEFQNTEIPLLLVGHSIGSYISLEVLRRSPE 554
           H+ HT+K+WE  RLF+LQDQIDHK+D+I+HE +N + P+LLVGHSIG+YIS+E+ RRSP+
Sbjct: 128 HVSHTKKNWEHGRLFTLQDQIDHKMDFIQHELKNIDAPILLVGHSIGAYISMEMFRRSPD 187

Query: 553 QVPSYIYFYPFXXXXXXXXXXXLIGKTAASQVISTFLSSLVAMLGLFPSSVSRTLVKRSI 374
           +V  Y+  YPF            IG+ +AS ++   LSS+VA LGL P   S  +V  S+
Sbjct: 188 KVIYYVGLYPFLALNSESRKQTTIGRISASPILCAALSSIVAFLGLLPRWASGFIVSNSL 247

Query: 373 GKSWSATAVEALCSHLLQYHTLRNVLFLAMTEFEKLAEVPDWMFIRGNQEKIAFLFGIDD 194
           GKSWS+TAVEALCSHLL+YHT+RNVL++AMTEF +L+E  DW+F+R  + +IAFLFG+DD
Sbjct: 248 GKSWSSTAVEALCSHLLKYHTIRNVLYMAMTEFTRLSEPLDWVFMREKRSQIAFLFGVDD 307

Query: 193 HWGPLSMFEQISKQVPEVALTIEREGHTHGFCCTEAGSVWVADHVVSLIKYQFQS 29
           HWGPL M E+ISKQ P+VAL+IEREGH+H FCCTEAGS+WVA HV +LIK Q  S
Sbjct: 308 HWGPLQMLEEISKQAPDVALSIEREGHSHAFCCTEAGSLWVAQHVANLIKNQISS 362


>ref|XP_002275518.1| PREDICTED: UPF0554 protein C2orf43 homolog [Vitis vinifera]
          Length = 311

 Score =  397 bits (1021), Expect = e-108
 Identities = 184/295 (62%), Positives = 233/295 (78%)
 Frame = -2

Query: 913 NLRLCNVSGFTTELLELKAQNPSFHVLVIPGNPGVVSFYKEFVERVYEMLEGCASVTAIG 734
           N RLC+VSG+TTELL+L A+ P  HVL IPGNPG+VSFYK+FVE +YE+L G  SVTAIG
Sbjct: 15  NFRLCSVSGYTTELLDLHAEEPKLHVLFIPGNPGIVSFYKDFVESLYELLGGSVSVTAIG 74

Query: 733 HIGHTRKDWERRRLFSLQDQIDHKVDYIKHEFQNTEIPLLLVGHSIGSYISLEVLRRSPE 554
           H+ HT+K+WE  RLF+LQDQIDHK+D+I+HE +N + P+LLVGHSIG+YIS+E+ RRSP+
Sbjct: 75  HVSHTKKNWEHGRLFTLQDQIDHKMDFIQHELKNIDAPILLVGHSIGAYISMEMFRRSPD 134

Query: 553 QVPSYIYFYPFXXXXXXXXXXXLIGKTAASQVISTFLSSLVAMLGLFPSSVSRTLVKRSI 374
           +V  Y+  YPF            IG+ +AS ++   LSS+VA LGL P   S  +V  S+
Sbjct: 135 KVIYYVGLYPFLALNSESRKQTTIGRISASPILCAALSSIVAFLGLLPRWASGFIVSNSL 194

Query: 373 GKSWSATAVEALCSHLLQYHTLRNVLFLAMTEFEKLAEVPDWMFIRGNQEKIAFLFGIDD 194
           GKSWS+TAVEALCSHLL+YHT+RNVL++AMTEF +L+E  DW+F+R  + +IAFLFG+DD
Sbjct: 195 GKSWSSTAVEALCSHLLKYHTIRNVLYMAMTEFTRLSEPLDWVFMREKRSQIAFLFGVDD 254

Query: 193 HWGPLSMFEQISKQVPEVALTIEREGHTHGFCCTEAGSVWVADHVVSLIKYQFQS 29
           HWGPL M E+ISKQ P+VAL+IEREGH+H FCCTEAGS+WVA HV +LIK Q  S
Sbjct: 255 HWGPLQMLEEISKQAPDVALSIEREGHSHAFCCTEAGSLWVAQHVANLIKNQISS 309


>gb|AFK48327.1| unknown [Lotus japonicus]
          Length = 313

 Score =  386 bits (992), Expect = e-105
 Identities = 182/295 (61%), Positives = 227/295 (76%)
 Frame = -2

Query: 919 KQNLRLCNVSGFTTELLELKAQNPSFHVLVIPGNPGVVSFYKEFVERVYEMLEGCASVTA 740
           + N RLCNVSG+T+E+LE++A  PS HVL IPGNPGV+ FYKEFVE +YE+L G ASVTA
Sbjct: 14  RANFRLCNVSGYTSEILEIQADTPSLHVLFIPGNPGVILFYKEFVEFLYELLAGTASVTA 73

Query: 739 IGHIGHTRKDWERRRLFSLQDQIDHKVDYIKHEFQNTEIPLLLVGHSIGSYISLEVLRRS 560
           IGH+ H+RKDWE+ RL SLQ+QIDHK+D+I+ E QN EIP+LLVGHSIGSYIS+E+ ++S
Sbjct: 74  IGHVSHSRKDWEQGRLLSLQEQIDHKIDFIREELQNIEIPILLVGHSIGSYISIEIFKKS 133

Query: 559 PEQVPSYIYFYPFXXXXXXXXXXXLIGKTAASQVISTFLSSLVAMLGLFPSSVSRTLVKR 380
           P++V   +  YPF           +I K A S  ++  LS LVA LGL P    R +V++
Sbjct: 134 PQKVKYCVGLYPFLTLNPHSTTQLVIAKIAKSHFVAAALSYLVASLGLLPVQALRFIVRK 193

Query: 379 SIGKSWSATAVEALCSHLLQYHTLRNVLFLAMTEFEKLAEVPDWMFIRGNQEKIAFLFGI 200
           S+GKSWSA+AVEA CSHL QYHT+RNVL++AMTEFEKL+E PDW FIR  + + AFLFG 
Sbjct: 194 SLGKSWSASAVEAACSHLSQYHTMRNVLYMAMTEFEKLSETPDWAFIRERKAQFAFLFGD 253

Query: 199 DDHWGPLSMFEQISKQVPEVALTIEREGHTHGFCCTEAGSVWVADHVVSLIKYQF 35
           DDHWGPL + E+ISK VP + ++IERE HTHGF CTEAGS+WVA HV  LIK Q+
Sbjct: 254 DDHWGPLHLSEEISKLVPGIPISIERENHTHGFSCTEAGSLWVAQHVADLIKNQW 308


>ref|NP_001239760.1| uncharacterized protein LOC100790552 [Glycine max]
           gi|255634927|gb|ACU17822.1| unknown [Glycine max]
          Length = 349

 Score =  385 bits (990), Expect = e-105
 Identities = 181/294 (61%), Positives = 230/294 (78%)
 Frame = -2

Query: 919 KQNLRLCNVSGFTTELLELKAQNPSFHVLVIPGNPGVVSFYKEFVERVYEMLEGCASVTA 740
           + N RLCNVS +T+E+LE+++  P+ HVL +PGNPGV+ FYK+FVE +YE+LEG ASVTA
Sbjct: 50  RANFRLCNVSCYTSEVLEIQSDAPTLHVLFVPGNPGVILFYKDFVEFLYELLEGTASVTA 109

Query: 739 IGHIGHTRKDWERRRLFSLQDQIDHKVDYIKHEFQNTEIPLLLVGHSIGSYISLEVLRRS 560
           IGH+ H+RK+ E  R+FSLQ+QIDHK+D+I+ E +N EIP+LLVGHSIGSYIS+E+ ++S
Sbjct: 110 IGHVSHSRKNLEHGRMFSLQEQIDHKIDFIREELENVEIPILLVGHSIGSYISIEMFKKS 169

Query: 559 PEQVPSYIYFYPFXXXXXXXXXXXLIGKTAASQVISTFLSSLVAMLGLFPSSVSRTLVKR 380
           PE+V   I  YPF           +IGK A SQV++  LS L A LGL P    R LV++
Sbjct: 170 PEKVKYCIGLYPFLTLNPHSTTQLVIGKIAKSQVLAAALSYLTASLGLLPVQALRFLVRK 229

Query: 379 SIGKSWSATAVEALCSHLLQYHTLRNVLFLAMTEFEKLAEVPDWMFIRGNQEKIAFLFGI 200
           S+GKSWSA AVEA CSHL QYHT+RNVL++AMTEF KL+E PDW+F+R  + ++AFLFG+
Sbjct: 230 SLGKSWSANAVEAACSHLSQYHTMRNVLYMAMTEFRKLSEAPDWIFMRERKAQLAFLFGV 289

Query: 199 DDHWGPLSMFEQISKQVPEVALTIEREGHTHGFCCTEAGSVWVADHVVSLIKYQ 38
           DDHWGPL + E+ISK VP +A  IERE HTHGFCCTEAGS+WVA HVV+LIK Q
Sbjct: 290 DDHWGPLHLLEEISKHVPGMATYIERENHTHGFCCTEAGSLWVAQHVVNLIKNQ 343


>ref|XP_002322800.1| predicted protein [Populus trichocarpa] gi|222867430|gb|EEF04561.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score =  382 bits (980), Expect = e-104
 Identities = 185/294 (62%), Positives = 223/294 (75%)
 Frame = -2

Query: 910 LRLCNVSGFTTELLELKAQNPSFHVLVIPGNPGVVSFYKEFVERVYEMLEGCASVTAIGH 731
           LRL  VSG TTELLE+++  P+FHVL IPGNPGVVSFYK+F+E +YE+L G ASVTAIGH
Sbjct: 17  LRLSKVSGHTTELLEIQSDKPTFHVLFIPGNPGVVSFYKDFLESLYELLGGSASVTAIGH 76

Query: 730 IGHTRKDWERRRLFSLQDQIDHKVDYIKHEFQNTEIPLLLVGHSIGSYISLEVLRRSPEQ 551
           I HT K+WE  +LFSLQDQIDHKVD+IK E QN E+P++LVGHSIGSYIS E+LR   E+
Sbjct: 77  ISHTEKNWEHGKLFSLQDQIDHKVDFIKQELQNNELPIVLVGHSIGSYISHEILRFL-EK 135

Query: 550 VPSYIYFYPFXXXXXXXXXXXLIGKTAASQVISTFLSSLVAMLGLFPSSVSRTLVKRSIG 371
           V   I  YPF            I   A S ++S  LS  VA LGL P    R ++ +S+G
Sbjct: 136 VTYLIGLYPFLMLNPLSKQQSNIQNVAESSILSALLSFSVASLGLLPQCTLRFILSKSLG 195

Query: 370 KSWSATAVEALCSHLLQYHTLRNVLFLAMTEFEKLAEVPDWMFIRGNQEKIAFLFGIDDH 191
            SWS TA++A CSHLLQYHT+RN+L++A+ EF KL+E+PDW F+R N EKIAFLFG+DDH
Sbjct: 196 SSWSDTAIDAACSHLLQYHTIRNMLYMALMEFRKLSEMPDWAFMRENHEKIAFLFGVDDH 255

Query: 190 WGPLSMFEQISKQVPEVALTIEREGHTHGFCCTEAGSVWVADHVVSLIKYQFQS 29
           WGPL MFE+ISKQVP ++L+IEREGHTH FCCTEAGS WVA HV SLIK +  S
Sbjct: 256 WGPLQMFEEISKQVPGISLSIEREGHTHSFCCTEAGSEWVAHHVASLIKKKISS 309


Top