BLASTX nr result

ID: Coptis21_contig00024731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024731
         (1397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329547.1| predicted protein [Populus trichocarpa] gi|1...   402   0.0  
ref|XP_002282871.1| PREDICTED: beta-amylase 3, chloroplastic-lik...   405   0.0  
emb|CAN62440.1| hypothetical protein VITISV_032500 [Vitis vinifera]   406   0.0  
ref|XP_002517513.1| Beta-amylase, putative [Ricinus communis] gi...   414   0.0  
gb|AAK84008.1|AF393847_1 beta-amylase PCT-BMYI [Solanum tuberosum]    397   0.0  

>ref|XP_002329547.1| predicted protein [Populus trichocarpa] gi|118487474|gb|ABK95564.1|
           unknown [Populus trichocarpa]
           gi|222870256|gb|EEF07387.1| predicted protein [Populus
           trichocarpa]
          Length = 548

 Score =  402 bits (1034), Expect(2) = 0.0
 Identities = 190/253 (75%), Positives = 218/253 (86%), Gaps = 2/253 (0%)
 Frame = +1

Query: 1   LRVKNSSVNEAQTSHEKTLYFNGRDEERAERQHVLSS--QKKNGPKVPVYVMLPLDTVSI 174
           L+ KNS   EAQ S +  L   GR  +  E+ H +S      +  +VPV+VMLPLDTV+I
Sbjct: 41  LQAKNSK-QEAQLSQDDILVTEGRKSKNWEKLHAISGPDHSSSNSRVPVFVMLPLDTVTI 99

Query: 175 GGNLNRPKSLNASLMALKSAGVEGVMVDAWWGLVEKNGPMNYNWKGYFDLVQMVEKHGLK 354
           GGNLN+P+++NASLMAL+SAGVEGVMVDAWWGLVEK+GP+ YNW+GY +LVQMV+KHGLK
Sbjct: 100 GGNLNKPRAMNASLMALRSAGVEGVMVDAWWGLVEKDGPLKYNWEGYAELVQMVQKHGLK 159

Query: 355 IQVVMSFHQCGGNVGDSCSIPLPPWVLEEISNNPDLVYTDRSGRRNLEYISLGCDSFPVL 534
           +QVVMSFHQCGGNVGDSCSIPLPPWVLEE+S N DLVYTD+SGRRN EYISLGCDS P+L
Sbjct: 160 LQVVMSFHQCGGNVGDSCSIPLPPWVLEEMSKNLDLVYTDKSGRRNPEYISLGCDSLPLL 219

Query: 535 RGRTPIQVYSDYMRSFRDHFKDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGE 714
           RGRTPIQVYSDYMRSFR+ FKDYLG+VI EIQVGMGPCGELRYP+YPES GTW FPGIGE
Sbjct: 220 RGRTPIQVYSDYMRSFRNRFKDYLGQVITEIQVGMGPCGELRYPAYPESKGTWNFPGIGE 279

Query: 715 FQCYDKYMKASLK 753
           FQCYDKYM+ASL+
Sbjct: 280 FQCYDKYMRASLE 292



 Score =  376 bits (966), Expect(2) = 0.0
 Identities = 170/216 (78%), Positives = 194/216 (89%)
 Frame = +3

Query: 750  KATADAIGKESWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTDYGQFFLQWYSHKLIEHGD 929
            +A+A+A+GK  WG  GPHDSGQYNQFPE+TGFFRRDGTWNT+YGQFFL+WYS KL+EHGD
Sbjct: 292  EASAEAVGKTGWGQRGPHDSGQYNQFPEETGFFRRDGTWNTEYGQFFLEWYSGKLLEHGD 351

Query: 930  QILAAAQGIYRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHHDGYLPIAQMLGKR 1109
            +ILAAA+GI+RGTGAKLSGKVAGIHWHY TRSHAAELTAGYYNTRHHDGYLP+A+M  K 
Sbjct: 352  KILAAAEGIFRGTGAKLSGKVAGIHWHYGTRSHAAELTAGYYNTRHHDGYLPMARMFSKH 411

Query: 1110 NAVLNFTCMEMRDGEQPASANCSPQGLVKQVKLVTKLTGTELAGENALERYDEGAYAQVL 1289
              V NFTCMEMRDGEQP  ANCSP+GLV+QVK+ T+   TELAGENALERYD GA++QV+
Sbjct: 412  GVVFNFTCMEMRDGEQPQHANCSPEGLVRQVKMATRTARTELAGENALERYDAGAFSQVM 471

Query: 1290 ETSRSDSGNGLTAFTYLRLNKRMFEGDNWRNLVVFV 1397
             TSRS+SGNGLTAFTYLR+NKR+FEGDNW +LV FV
Sbjct: 472  ATSRSESGNGLTAFTYLRMNKRLFEGDNWLHLVQFV 507


>ref|XP_002282871.1| PREDICTED: beta-amylase 3, chloroplastic-like isoform 1 [Vitis
           vinifera]
          Length = 543

 Score =  405 bits (1040), Expect(2) = 0.0
 Identities = 191/245 (77%), Positives = 211/245 (86%)
 Frame = +1

Query: 19  SVNEAQTSHEKTLYFNGRDEERAERQHVLSSQKKNGPKVPVYVMLPLDTVSIGGNLNRPK 198
           S  EA   HE  +   GR  +      + +   KNG +VPV+VMLPLDTVS GGNLN+P+
Sbjct: 45  STQEAHLCHENAMVSEGRKNQVLHG--LPTPHNKNGSRVPVFVMLPLDTVSFGGNLNKPR 102

Query: 199 SLNASLMALKSAGVEGVMVDAWWGLVEKNGPMNYNWKGYFDLVQMVEKHGLKIQVVMSFH 378
           ++NASLMALKS+GVEGVMVDAWWGLVEK+GPM YNW+GY +LVQMV++HGLK+QVVMSFH
Sbjct: 103 AMNASLMALKSSGVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQRHGLKLQVVMSFH 162

Query: 379 QCGGNVGDSCSIPLPPWVLEEISNNPDLVYTDRSGRRNLEYISLGCDSFPVLRGRTPIQV 558
           QCGGNVGDSCSIPLPPWVLEEIS N DLVYTDRSGRRN EYISLGCDS PVLRGRTPIQV
Sbjct: 163 QCGGNVGDSCSIPLPPWVLEEISKNTDLVYTDRSGRRNPEYISLGCDSIPVLRGRTPIQV 222

Query: 559 YSDYMRSFRDHFKDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYM 738
           YSDYMRSF + FKDYLG VI EIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYM
Sbjct: 223 YSDYMRSFHNRFKDYLGGVIAEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYM 282

Query: 739 KASLK 753
           +ASL+
Sbjct: 283 RASLE 287



 Score =  374 bits (959), Expect(2) = 0.0
 Identities = 171/216 (79%), Positives = 195/216 (90%)
 Frame = +3

Query: 750  KATADAIGKESWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTDYGQFFLQWYSHKLIEHGD 929
            +A+ADA+GK+ WG +GP D+G YNQFPEDTGFFRRDGTW T+YGQFFL+WYS KL+EHGD
Sbjct: 287  EASADAVGKKDWGRSGPQDAGHYNQFPEDTGFFRRDGTWTTEYGQFFLKWYSGKLLEHGD 346

Query: 930  QILAAAQGIYRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHHDGYLPIAQMLGKR 1109
            +ILAAA+GI++GTGAKLSGKVAGIHWHY TRSHAAELTAGYYNTR+HDGYLPIA+M+GK 
Sbjct: 347  RILAAAEGIFQGTGAKLSGKVAGIHWHYKTRSHAAELTAGYYNTRNHDGYLPIARMMGKY 406

Query: 1110 NAVLNFTCMEMRDGEQPASANCSPQGLVKQVKLVTKLTGTELAGENALERYDEGAYAQVL 1289
              VLNFTCMEM+D EQ   ANCSP+GLV+QVK+ TK  GTELAGENALERYD  AYAQVL
Sbjct: 407  GVVLNFTCMEMKDREQQEHANCSPEGLVRQVKMATKTAGTELAGENALERYDSSAYAQVL 466

Query: 1290 ETSRSDSGNGLTAFTYLRLNKRMFEGDNWRNLVVFV 1397
             TSRSDSGNGL+AFTYLR+NKR+FEGDNWR+LV FV
Sbjct: 467  ATSRSDSGNGLSAFTYLRMNKRLFEGDNWRSLVEFV 502


>emb|CAN62440.1| hypothetical protein VITISV_032500 [Vitis vinifera]
          Length = 543

 Score =  406 bits (1043), Expect(2) = 0.0
 Identities = 192/245 (78%), Positives = 211/245 (86%)
 Frame = +1

Query: 19  SVNEAQTSHEKTLYFNGRDEERAERQHVLSSQKKNGPKVPVYVMLPLDTVSIGGNLNRPK 198
           S  EA   HE  +   GR  +      + +   KNG +VPV+VMLPLDTVS GGNLN+P+
Sbjct: 45  STQEAHLCHENAMVSEGRKNQVLHG--LPTPHNKNGSRVPVFVMLPLDTVSFGGNLNKPR 102

Query: 199 SLNASLMALKSAGVEGVMVDAWWGLVEKNGPMNYNWKGYFDLVQMVEKHGLKIQVVMSFH 378
           ++NASLMALKSAGVEGVMVDAWWGLVEK+GPM YNW+GY +LVQMV++HGLK+QVVMSFH
Sbjct: 103 AMNASLMALKSAGVEGVMVDAWWGLVEKDGPMKYNWEGYAELVQMVQRHGLKLQVVMSFH 162

Query: 379 QCGGNVGDSCSIPLPPWVLEEISNNPDLVYTDRSGRRNLEYISLGCDSFPVLRGRTPIQV 558
           QCGGNVGDSCSIPLPPWVLEEIS N DLVYTDRSGRRN EYISLGCDS PVLRGRTPIQV
Sbjct: 163 QCGGNVGDSCSIPLPPWVLEEISKNTDLVYTDRSGRRNPEYISLGCDSIPVLRGRTPIQV 222

Query: 559 YSDYMRSFRDHFKDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYM 738
           YSDYMRSF + FKDYLG VI EIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYM
Sbjct: 223 YSDYMRSFHNRFKDYLGGVIAEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYM 282

Query: 739 KASLK 753
           +ASL+
Sbjct: 283 RASLE 287



 Score =  371 bits (952), Expect(2) = 0.0
 Identities = 170/216 (78%), Positives = 194/216 (89%)
 Frame = +3

Query: 750  KATADAIGKESWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTDYGQFFLQWYSHKLIEHGD 929
            +A+ADA+GK+ WG +GP D+G YNQFPEDTGFFRRDGTW T+YGQFFL+WYS KL+EHGD
Sbjct: 287  EASADAVGKKDWGRSGPQDAGHYNQFPEDTGFFRRDGTWTTEYGQFFLKWYSGKLLEHGD 346

Query: 930  QILAAAQGIYRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHHDGYLPIAQMLGKR 1109
            +ILAAA+GI++GTGAKLSGKVAGIHWHY TRSHAAELTAGYYNTR+HDGYLPIA+M+GK 
Sbjct: 347  RILAAAEGIFQGTGAKLSGKVAGIHWHYKTRSHAAELTAGYYNTRNHDGYLPIARMMGKY 406

Query: 1110 NAVLNFTCMEMRDGEQPASANCSPQGLVKQVKLVTKLTGTELAGENALERYDEGAYAQVL 1289
              VLNFTCMEM+D EQ   ANCSP+GLV+QVK+ TK   TELAGENALERYD  AYAQVL
Sbjct: 407  GVVLNFTCMEMKDREQQEHANCSPEGLVRQVKMATKTAXTELAGENALERYDSSAYAQVL 466

Query: 1290 ETSRSDSGNGLTAFTYLRLNKRMFEGDNWRNLVVFV 1397
             TSRSDSGNGL+AFTYLR+NKR+FEGDNWR+LV FV
Sbjct: 467  ATSRSDSGNGLSAFTYLRMNKRLFEGDNWRSLVEFV 502


>ref|XP_002517513.1| Beta-amylase, putative [Ricinus communis]
           gi|223543524|gb|EEF45055.1| Beta-amylase, putative
           [Ricinus communis]
          Length = 547

 Score =  414 bits (1064), Expect(2) = 0.0
 Identities = 193/247 (78%), Positives = 217/247 (87%), Gaps = 1/247 (0%)
 Frame = +1

Query: 16  SSVNEAQTSHEKTLYFNGRDEERAERQHVLS-SQKKNGPKVPVYVMLPLDTVSIGGNLNR 192
           +S+ EAQ S +      GR  +  E+ H +S SQ  N  KVPV+VMLPLDTV++GGNLN+
Sbjct: 45  NSMQEAQLSQDNIFTMEGRRSDNREKLHAMSNSQSSNDSKVPVFVMLPLDTVTLGGNLNK 104

Query: 193 PKSLNASLMALKSAGVEGVMVDAWWGLVEKNGPMNYNWKGYFDLVQMVEKHGLKIQVVMS 372
           P+++NASLMALKSAGVEGVMVDAWWGLVEK+GP  YNW+GY DLV MV+KHGLK+QVVMS
Sbjct: 105 PRAMNASLMALKSAGVEGVMVDAWWGLVEKDGPRKYNWEGYADLVHMVQKHGLKLQVVMS 164

Query: 373 FHQCGGNVGDSCSIPLPPWVLEEISNNPDLVYTDRSGRRNLEYISLGCDSFPVLRGRTPI 552
           FHQCGGNVGDSCSIPLPPWVLEEIS NPDLVYTDRSGRRN EYISLGCDS PVLRGRTPI
Sbjct: 165 FHQCGGNVGDSCSIPLPPWVLEEISKNPDLVYTDRSGRRNPEYISLGCDSLPVLRGRTPI 224

Query: 553 QVYSDYMRSFRDHFKDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDK 732
           QVY+DYMRSF + F+DYLG V+VEIQVGMGPCGELRYP+YPESNGTW+FPGIGEFQCYDK
Sbjct: 225 QVYTDYMRSFCNRFRDYLGEVVVEIQVGMGPCGELRYPAYPESNGTWKFPGIGEFQCYDK 284

Query: 733 YMKASLK 753
           YMKASL+
Sbjct: 285 YMKASLE 291



 Score =  355 bits (911), Expect(2) = 0.0
 Identities = 160/216 (74%), Positives = 186/216 (86%)
 Frame = +3

Query: 750  KATADAIGKESWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTDYGQFFLQWYSHKLIEHGD 929
            +A+A+AIG + WG  GPHD+G Y QFPE+TGFFRRDGTW T+YGQFFL+WYS KL++HGD
Sbjct: 291  EASAEAIGNKDWGRGGPHDAGHYKQFPEETGFFRRDGTWKTEYGQFFLEWYSGKLLDHGD 350

Query: 930  QILAAAQGIYRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHHDGYLPIAQMLGKR 1109
            +ILAAA+GI++GTGAKLSGKVAGIHWHY TRSHA ELTAGYYNTRHHDGYL +A M  K 
Sbjct: 351  RILAAAKGIFQGTGAKLSGKVAGIHWHYRTRSHAPELTAGYYNTRHHDGYLTVAHMFSKH 410

Query: 1110 NAVLNFTCMEMRDGEQPASANCSPQGLVKQVKLVTKLTGTELAGENALERYDEGAYAQVL 1289
              V NFTCMEMRDGEQP  AN SP+GLV+QVK+ T+  G ELAGENALERYD   YAQVL
Sbjct: 411  GVVFNFTCMEMRDGEQPGHANSSPEGLVRQVKMATRSAGVELAGENALERYDAAGYAQVL 470

Query: 1290 ETSRSDSGNGLTAFTYLRLNKRMFEGDNWRNLVVFV 1397
             TSRS+SGNGLTAFTYLR+NK++FEGD+W++LV FV
Sbjct: 471  ATSRSESGNGLTAFTYLRMNKKLFEGDHWQHLVEFV 506


>gb|AAK84008.1|AF393847_1 beta-amylase PCT-BMYI [Solanum tuberosum]
          Length = 545

 Score =  397 bits (1021), Expect(2) = 0.0
 Identities = 186/249 (74%), Positives = 216/249 (86%), Gaps = 1/249 (0%)
 Frame = +1

Query: 7   VKNSSVNEAQTSHEKTLYFNGRDEERAERQHVLSSQKKN-GPKVPVYVMLPLDTVSIGGN 183
           V  SS+ EAQ SHE+ +    +  E+ E+ H L +   N   +VPV+VMLPLDT+++GGN
Sbjct: 42  VAKSSMQEAQLSHERIMEV--KKIEKREKLHELPANHSNRSTRVPVFVMLPLDTMTMGGN 99

Query: 184 LNRPKSLNASLMALKSAGVEGVMVDAWWGLVEKNGPMNYNWKGYFDLVQMVEKHGLKIQV 363
           LNRP+++NASLMALKS+G EGVMVDAWWGLVEK+GP+ YNW+GY +LV+M ++HGLK+QV
Sbjct: 100 LNRPRAMNASLMALKSSGAEGVMVDAWWGLVEKDGPLKYNWEGYAELVKMCQEHGLKLQV 159

Query: 364 VMSFHQCGGNVGDSCSIPLPPWVLEEISNNPDLVYTDRSGRRNLEYISLGCDSFPVLRGR 543
           VMSFHQCGGNVGDSCSIPLPPWVLEEIS NPDLVYTDRSGRRN EY+SLGCD  PVL+GR
Sbjct: 160 VMSFHQCGGNVGDSCSIPLPPWVLEEISKNPDLVYTDRSGRRNPEYLSLGCDMLPVLKGR 219

Query: 544 TPIQVYSDYMRSFRDHFKDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQC 723
           TPIQVY+DYMRSFR+ F +YLG VIVEIQVGMGPCGELRYP+YPESNGTWRFPGIGEFQC
Sbjct: 220 TPIQVYTDYMRSFRERFNEYLGNVIVEIQVGMGPCGELRYPAYPESNGTWRFPGIGEFQC 279

Query: 724 YDKYMKASL 750
           YDKYM ASL
Sbjct: 280 YDKYMGASL 288



 Score =  364 bits (935), Expect(2) = 0.0
 Identities = 167/215 (77%), Positives = 189/215 (87%)
 Frame = +3

Query: 753  ATADAIGKESWGTNGPHDSGQYNQFPEDTGFFRRDGTWNTDYGQFFLQWYSHKLIEHGDQ 932
            A A A GK+ WG  GPHDSG+YNQFPEDTGFF+RDGTWN++YGQFFL+WYS KL+EHGD+
Sbjct: 290  AVAKAAGKDDWGQGGPHDSGKYNQFPEDTGFFQRDGTWNSEYGQFFLEWYSGKLLEHGDR 349

Query: 933  ILAAAQGIYRGTGAKLSGKVAGIHWHYNTRSHAAELTAGYYNTRHHDGYLPIAQMLGKRN 1112
            ILAA + IY+GTGAKLSGKVAGIHWHYNTRSHAAELT+GYYNTRH DGYLPIA+ML K  
Sbjct: 350  ILAAGESIYQGTGAKLSGKVAGIHWHYNTRSHAAELTSGYYNTRHRDGYLPIARMLAKHG 409

Query: 1113 AVLNFTCMEMRDGEQPASANCSPQGLVKQVKLVTKLTGTELAGENALERYDEGAYAQVLE 1292
            AVLNFTCMEMRDGEQP SANCSP+GLV+QVK   +    ELAGENALERYD GA++QVL 
Sbjct: 410  AVLNFTCMEMRDGEQPQSANCSPEGLVRQVKTAARTAEVELAGENALERYDGGAFSQVLA 469

Query: 1293 TSRSDSGNGLTAFTYLRLNKRMFEGDNWRNLVVFV 1397
            TS SDSGNGL+AFT+LR+NKR+FE +NWRNLV FV
Sbjct: 470  TSMSDSGNGLSAFTFLRMNKRLFEPENWRNLVQFV 504


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