BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024715
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containi...   206   1e-51
ref|XP_002319950.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-48
ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40

>ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera] gi|296081235|emb|CBI17979.3| unnamed
           protein product [Vitis vinifera]
          Length = 742

 Score =  206 bits (525), Expect = 1e-51
 Identities = 102/119 (85%), Positives = 111/119 (93%)
 Frame = +3

Query: 3   NLYASVRRWDGVSKVRVLMREKGLSKDLGYSLIEISGKLQAFRVGDKSHPRSKEIFEEME 182
           NLYAS R WD V+KVR+LMREKGLSKDLGYSLIEI+GKLQAFRVGDKSHPR KEIFEE+E
Sbjct: 581 NLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELE 640

Query: 183 SLERRLKEAGFIPNTDSVLHDLNSEDREVTLCNHSERLAIAFGLISTPPGTTLRITKNL 359
           SLERRLKEAGFIP+ +SVLHDLN E++E TLCNHSERLAIA+GLIST PGTTLRITKNL
Sbjct: 641 SLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNL 699


>ref|XP_002319950.1| predicted protein [Populus trichocarpa] gi|222858326|gb|EEE95873.1|
           predicted protein [Populus trichocarpa]
          Length = 746

 Score =  197 bits (500), Expect = 1e-48
 Identities = 97/119 (81%), Positives = 109/119 (91%)
 Frame = +3

Query: 3   NLYASVRRWDGVSKVRVLMREKGLSKDLGYSLIEISGKLQAFRVGDKSHPRSKEIFEEME 182
           NLYAS   WD V+KVRVLMREKGL+K LGYS+IEI+GKLQAF+ GDK+HPRSKEIFEE+E
Sbjct: 585 NLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVE 644

Query: 183 SLERRLKEAGFIPNTDSVLHDLNSEDREVTLCNHSERLAIAFGLISTPPGTTLRITKNL 359
            LERRLKEAGF+P+T+SVLHDLN E+ E TLCNHSERLAIA+GLISTPPGTTLRITKNL
Sbjct: 645 DLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNL 703


>ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  179 bits (453), Expect = 3e-43
 Identities = 88/119 (73%), Positives = 103/119 (86%)
 Frame = +3

Query: 3   NLYASVRRWDGVSKVRVLMREKGLSKDLGYSLIEISGKLQAFRVGDKSHPRSKEIFEEME 182
           NLYAS   WD V+ VRVLMREKGL+KDLGYS+IEI+GKLQAF VGDKSHP +KEIF+E++
Sbjct: 566 NLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQ 625

Query: 183 SLERRLKEAGFIPNTDSVLHDLNSEDREVTLCNHSERLAIAFGLISTPPGTTLRITKNL 359
            LERRLKE GF+P T+SVLHDLN E++E  L  HSER+A+A+GLIST PGTTLRITKNL
Sbjct: 626 RLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNL 684


>ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  170 bits (430), Expect = 1e-40
 Identities = 79/119 (66%), Positives = 102/119 (85%)
 Frame = +3

Query: 3   NLYASVRRWDGVSKVRVLMREKGLSKDLGYSLIEISGKLQAFRVGDKSHPRSKEIFEEME 182
           NLYAS   W  V+ VR++M +KGL+KDLG+S IEI+G L+ F+VGD+SHP+SKEIFEE++
Sbjct: 497 NLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELD 556

Query: 183 SLERRLKEAGFIPNTDSVLHDLNSEDREVTLCNHSERLAIAFGLISTPPGTTLRITKNL 359
            LE+RLK AG++P+ +SVLHDLN E+ E TLC+HSERLA+A+G+IST PGTTLRITKNL
Sbjct: 557 RLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNL 615


>ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  170 bits (430), Expect = 1e-40
 Identities = 79/119 (66%), Positives = 102/119 (85%)
 Frame = +3

Query: 3   NLYASVRRWDGVSKVRVLMREKGLSKDLGYSLIEISGKLQAFRVGDKSHPRSKEIFEEME 182
           NLYAS   W  V+ VR++M +KGL+KDLG+S IEI+G L+ F+VGD+SHP+SKEIFEE++
Sbjct: 512 NLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELD 571

Query: 183 SLERRLKEAGFIPNTDSVLHDLNSEDREVTLCNHSERLAIAFGLISTPPGTTLRITKNL 359
            LE+RLK AG++P+ +SVLHDLN E+ E TLC+HSERLA+A+G+IST PGTTLRITKNL
Sbjct: 572 RLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNL 630