BLASTX nr result

ID: Coptis21_contig00024706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024706
         (830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001032026.1| casein kinase 2 subunit beta [Arabidopsis th...    66   8e-09
ref|NP_974896.1| casein kinase 2 subunit beta [Arabidopsis thali...    66   8e-09
tpg|DAA62803.1| TPA: hypothetical protein ZEAMMB73_706069 [Zea m...    65   2e-08
ref|XP_004138933.1| PREDICTED: putative casein kinase II subunit...    62   2e-07
gb|AEK26563.1| casein kinase II beta subunit [Populus tremula] g...    62   2e-07

>ref|NP_001032026.1| casein kinase 2 subunit beta [Arabidopsis thaliana]
           gi|332008085|gb|AED95468.1| casein kinase 2 subunit beta
           [Arabidopsis thaliana]
          Length = 253

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 33/40 (82%), Positives = 34/40 (85%)
 Frame = +2

Query: 2   PRSSTVKIYCPKCEDIYYPRSKYQGSILHLLFSKETLLCI 121
           PRSSTVKIYCPKCEDIYYPRSKYQGSI   LFS  +LL I
Sbjct: 217 PRSSTVKIYCPKCEDIYYPRSKYQGSI---LFSTVSLLLI 253


>ref|NP_974896.1| casein kinase 2 subunit beta [Arabidopsis thaliana]
           gi|332008084|gb|AED95467.1| casein kinase 2 subunit beta
           [Arabidopsis thaliana]
          Length = 256

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 33/40 (82%), Positives = 34/40 (85%)
 Frame = +2

Query: 2   PRSSTVKIYCPKCEDIYYPRSKYQGSILHLLFSKETLLCI 121
           PRSSTVKIYCPKCEDIYYPRSKYQGSI   LFS  +LL I
Sbjct: 220 PRSSTVKIYCPKCEDIYYPRSKYQGSI---LFSTVSLLLI 256


>tpg|DAA62803.1| TPA: hypothetical protein ZEAMMB73_706069 [Zea mays]
          Length = 252

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +2

Query: 5   RSSTVKIYCPKCEDIYYPRSKYQGSILHLLFS 100
           RSSTVKIYCPKCEDIYYPRSKYQGSIL +L S
Sbjct: 207 RSSTVKIYCPKCEDIYYPRSKYQGSILTILLS 238


>ref|XP_004138933.1| PREDICTED: putative casein kinase II subunit beta-4-like [Cucumis
           sativus] gi|449505605|ref|XP_004162519.1| PREDICTED:
           putative casein kinase II subunit beta-4-like [Cucumis
           sativus]
          Length = 295

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +2

Query: 2   PRSSTVKIYCPKCEDIYYPRSKYQGSI 82
           PRSSTVKIYCPKCEDIYYPRSKYQG+I
Sbjct: 226 PRSSTVKIYCPKCEDIYYPRSKYQGNI 252


>gb|AEK26563.1| casein kinase II beta subunit [Populus tremula]
           gi|340007717|gb|AEK26564.1| casein kinase II beta
           subunit [Populus tremula] gi|340007719|gb|AEK26565.1|
           casein kinase II beta subunit [Populus tremula]
          Length = 125

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +2

Query: 2   PRSSTVKIYCPKCEDIYYPRSKYQGSI 82
           PRSSTVKIYCPKCEDIYYPRSKYQG+I
Sbjct: 58  PRSSTVKIYCPKCEDIYYPRSKYQGNI 84


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