BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024703
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32741.1| hypothetical protein MtrDRAFT_AC150777g16v1 [Medi...    84   9e-15
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                  82   3e-14
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                  80   2e-13
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ...    73   3e-11
gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ...    73   3e-11

>gb|ABD32741.1| hypothetical protein MtrDRAFT_AC150777g16v1 [Medicago truncatula]
          Length = 187

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/68 (58%), Positives = 47/68 (69%)
 Frame = -2

Query: 205 VTRRCLVPFSIGSLYKDEVWCTVIPMTTVFHLLLGRPWQYDRDTTYDGTAITYSFIFQGQ 26
           V++ CLV FSIG  YKD VWC VI M    H+LLGRPWQYDR   YDG A TY+F+  G 
Sbjct: 29  VSKCCLVSFSIGQKYKDNVWCDVISMDAC-HMLLGRPWQYDRHALYDGHANTYTFVKYGV 87

Query: 25  QVVLSPLP 2
           ++ L PLP
Sbjct: 88  KIKLVPLP 95


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 36/68 (52%), Positives = 48/68 (70%)
 Frame = -2

Query: 205 VTRRCLVPFSIGSLYKDEVWCTVIPMTTVFHLLLGRPWQYDRDTTYDGTAITYSFIFQGQ 26
           V ++C++ FSIG +YKDEV C V+      HLLLGRPW+YDR+TT+ G    Y F  QG+
Sbjct: 456 VDKQCIISFSIGKMYKDEVLCDVVVPMDACHLLLGRPWEYDRNTTHQGKDNVYIFKHQGK 515

Query: 25  QVVLSPLP 2
           +V L+PLP
Sbjct: 516 KVTLTPLP 523


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/68 (52%), Positives = 49/68 (72%)
 Frame = -2

Query: 205 VTRRCLVPFSIGSLYKDEVWCTVIPMTTVFHLLLGRPWQYDRDTTYDGTAITYSFIFQGQ 26
           V ++CLV FSIG  Y DE  C V+PM    HLLLGRPW++DRD+ + G   TY+F F+ +
Sbjct: 445 VDKQCLVTFSIGKNYSDEALCDVLPMDAC-HLLLGRPWEFDRDSVHHGRDNTYTFKFRSR 503

Query: 25  QVVLSPLP 2
           +V+L+PLP
Sbjct: 504 KVILTPLP 511


>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/67 (47%), Positives = 47/67 (70%)
 Frame = -2

Query: 205 VTRRCLVPFSIGSLYKDEVWCTVIPMTTVFHLLLGRPWQYDRDTTYDGTAITYSFIFQGQ 26
           V ++C++ F++G  Y+DE+ C V+PM    H+LLGRPWQYDRDTT+ G    YS +  G+
Sbjct: 479 VNKQCMISFNVGR-YEDEILCDVVPMQAC-HVLLGRPWQYDRDTTHHGRKNRYSLLHNGK 536

Query: 25  QVVLSPL 5
           +  L+PL
Sbjct: 537 KYTLAPL 543


>gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1588

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/67 (47%), Positives = 47/67 (70%)
 Frame = -2

Query: 205 VTRRCLVPFSIGSLYKDEVWCTVIPMTTVFHLLLGRPWQYDRDTTYDGTAITYSFIFQGQ 26
           V ++C++ F++G  Y+DE+ C V+PM    H+LLGRPWQYDRDTT+ G    YS +  G+
Sbjct: 479 VNKQCMISFNVGR-YEDEILCDVVPMQAC-HVLLGRPWQYDRDTTHHGRKNRYSLLHNGK 536

Query: 25  QVVLSPL 5
           +  L+PL
Sbjct: 537 KYTLAPL 543