BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024690
         (1677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vi...   382   0.0  
ref|XP_002301037.1| predicted protein [Populus trichocarpa] gi|2...   377   0.0  
ref|XP_002513878.1| gtpase mss1/trme, putative [Ricinus communis...   363   0.0  
ref|XP_003522812.1| PREDICTED: tRNA modification GTPase MnmE-lik...   363   0.0  
ref|XP_003638789.1| tRNA modification GTPase mnmE [Medicago trun...   365   0.0  

>ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vitis vinifera]
            gi|302141924|emb|CBI19127.3| unnamed protein product
            [Vitis vinifera]
          Length = 571

 Score =  382 bits (980), Expect(2) = 0.0
 Identities = 203/283 (71%), Positives = 226/283 (79%), Gaps = 4/283 (1%)
 Frame = -2

Query: 1652 LHFTQKDETTVTLKGEKMGFQPFKEVPTEXXXXXXXXXXXS-LGTQPGAVGIVRLSGPSA 1476
            LH T  D T V  K E++G +   +   E           + LG  P AVGIVRLSGP A
Sbjct: 65   LHLTPNDTTLVLKKDERLGSRSVNQEHIEGTSTTTIAAIVTSLGGPPSAVGIVRLSGPEA 124

Query: 1475 VDVASRVFRPMGKRK-KSLGTSC--WRPRSHFVEYGVVLDRGGNVVDEVLAVPMLAPRSY 1305
            V + +RVFRP  + K K+LG+    WRP SH VEYGVVLD  GNVVDEVLA+PMLAPRSY
Sbjct: 125  VAIVARVFRPARRNKGKTLGSGSGSWRPTSHVVEYGVVLDHHGNVVDEVLAIPMLAPRSY 184

Query: 1304 TREDVVELQCHGNDVCLRRVLRACLEAGARLAEPGEFTLRAFLNGRLDLSQAENIEKLIS 1125
            TREDVVELQCHG++VCLRRVLRACLE+GARLAEPGEFTLRAFLNGRLDLSQAEN+ KLIS
Sbjct: 185  TREDVVELQCHGSEVCLRRVLRACLESGARLAEPGEFTLRAFLNGRLDLSQAENVGKLIS 244

Query: 1124 AKSVATADAALAGIQGGFSALVKSLRRQCVELPTEIEARLDFDDEMPSLDSHSLMDMIHG 945
            AKS+A ADAALAGIQGGFS+LV+SLR QC+EL TEIEARLDFDDEMP LD + +MD IH 
Sbjct: 245  AKSIAAADAALAGIQGGFSSLVRSLRIQCIELLTEIEARLDFDDEMPPLDLNLIMDKIHS 304

Query: 944  MCLDVEKALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSK 816
            M  DVE ALETANYD+LLQSGLQIAI+GRPNVGKSSLLNAWSK
Sbjct: 305  MSQDVENALETANYDQLLQSGLQIAIIGRPNVGKSSLLNAWSK 347



 Score =  327 bits (837), Expect(2) = 0.0
 Identities = 168/233 (72%), Positives = 192/233 (82%)
 Frame = -3

Query: 832  SMHGANMQSEKAIVTEIAGTTRDVVEASINVHGIPITLLDTAGIRETEDIVEKIGVERSE 653
            S+  A  +SE+AIVTEIAGTTRDVVEAS+++HGIP+TLLDTAGIRET+DIVEKIGVERSE
Sbjct: 340  SLLNAWSKSERAIVTEIAGTTRDVVEASVSIHGIPVTLLDTAGIRETDDIVEKIGVERSE 399

Query: 652  AVAMGADVIIMTVSAMDGWTSDDAELLERIQVNQEITGSCAPMILVINKIDCAPSESVET 473
            AVA+ ADVIIMT+SA+DGWTS D +L  RI  N++   S  P+ILV+NKIDCAPS   E 
Sbjct: 400  AVAISADVIIMTISALDGWTSQDTKLFNRIISNKKFVESSTPVILVVNKIDCAPSACTEL 459

Query: 472  LKRVVTPFNKHVLTCAVNGQGIPDLESALVEIAGLDRIPAGGRRWAVKQRQFEQLVQTKE 293
                   F+KH+ TCAV GQGI DLESA++EI GL++IPAGGRRW V QRQ EQLV+TKE
Sbjct: 460  FMEG-NSFSKHIFTCAVTGQGISDLESAIIEIVGLNKIPAGGRRWTVNQRQCEQLVRTKE 518

Query: 292  ALMRLKSSIEEEMPLDCWTIDLREAALALAQISGEDICEEVLSNILSKFCIGK 134
            AL RL SSIEEEMPLD WTIDLREAALAL QISGEDI EEVL+NI  KFCIGK
Sbjct: 519  ALARLISSIEEEMPLDFWTIDLREAALALGQISGEDISEEVLTNIFGKFCIGK 571


>ref|XP_002301037.1| predicted protein [Populus trichocarpa] gi|222842763|gb|EEE80310.1|
            predicted protein [Populus trichocarpa]
          Length = 483

 Score =  377 bits (968), Expect(2) = 0.0
 Identities = 192/238 (80%), Positives = 212/238 (89%)
 Frame = -2

Query: 1529 LGTQPGAVGIVRLSGPSAVDVASRVFRPMGKRKKSLGTSCWRPRSHFVEYGVVLDRGGNV 1350
            +G  P +VGIVRLSGPSAV++A+RVF+PM K+KK  G   W+P SH V+YGVVLD  GNV
Sbjct: 22   VGGPPASVGIVRLSGPSAVEIAARVFKPMRKKKKK-GFCVWKPTSHVVDYGVVLDHQGNV 80

Query: 1349 VDEVLAVPMLAPRSYTREDVVELQCHGNDVCLRRVLRACLEAGARLAEPGEFTLRAFLNG 1170
            VDEVLAVPMLAPRSYTREDVVELQCHG +VCLRRVLRAC+EAGARLAEPGEFTLRAFLNG
Sbjct: 81   VDEVLAVPMLAPRSYTREDVVELQCHGTEVCLRRVLRACIEAGARLAEPGEFTLRAFLNG 140

Query: 1169 RLDLSQAENIEKLISAKSVATADAALAGIQGGFSALVKSLRRQCVELPTEIEARLDFDDE 990
            RLDLSQAEN+ KLIS+KSVA ADAALAGIQGGF++LVKSLR QC+EL TEIEARLDFDDE
Sbjct: 141  RLDLSQAENVGKLISSKSVAAADAALAGIQGGFASLVKSLRTQCIELLTEIEARLDFDDE 200

Query: 989  MPSLDSHSLMDMIHGMCLDVEKALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSK 816
            MP LD + +MD IH M  +VE AL+TANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSK
Sbjct: 201  MPPLDLNLIMDKIHSMSENVENALKTANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSK 258



 Score =  315 bits (807), Expect(2) = 0.0
 Identities = 162/233 (69%), Positives = 189/233 (81%)
 Frame = -3

Query: 832 SMHGANMQSEKAIVTEIAGTTRDVVEASINVHGIPITLLDTAGIRETEDIVEKIGVERSE 653
           S+  A  +SE+AIVTEIAGTTRD+VEASI V GIP+ LLDTAGIR T+D+VEKIGVERSE
Sbjct: 251 SLLNAWSKSERAIVTEIAGTTRDIVEASITVGGIPVILLDTAGIRVTDDVVEKIGVERSE 310

Query: 652 AVAMGADVIIMTVSAMDGWTSDDAELLERIQVNQEITGSCAPMILVINKIDCAPSESVET 473
           AVA+GADVI+MTVSA+DGWT +D ELL RI   ++  GS  PMILV+NKIDC+PS   E 
Sbjct: 311 AVALGADVIVMTVSALDGWTPEDTELLNRIVSKKKSVGSFTPMILVVNKIDCSPSLCSEW 370

Query: 472 LKRVVTPFNKHVLTCAVNGQGIPDLESALVEIAGLDRIPAGGRRWAVKQRQFEQLVQTKE 293
           + R    F+KHV TCA+ GQGI DLE A+ EI GL++IPAGG +W V  RQ EQLV+ KE
Sbjct: 371 VDRGGGSFSKHVFTCAITGQGIQDLEMAISEIVGLNKIPAGGLKWTVNHRQCEQLVRMKE 430

Query: 292 ALMRLKSSIEEEMPLDCWTIDLREAALALAQISGEDICEEVLSNILSKFCIGK 134
           AL+RLKSSIEEEMPLD WTIDLR+AALAL QISGE+I EE+LSNI  KFCIGK
Sbjct: 431 ALVRLKSSIEEEMPLDFWTIDLRDAALALGQISGENISEEILSNIFGKFCIGK 483


>ref|XP_002513878.1| gtpase mss1/trme, putative [Ricinus communis]
            gi|223546964|gb|EEF48461.1| gtpase mss1/trme, putative
            [Ricinus communis]
          Length = 557

 Score =  363 bits (932), Expect(2) = 0.0
 Identities = 183/238 (76%), Positives = 207/238 (86%)
 Frame = -2

Query: 1529 LGTQPGAVGIVRLSGPSAVDVASRVFRPMGKRKKSLGTSCWRPRSHFVEYGVVLDRGGNV 1350
            +G  P AVGIVRLSGPSAVDVA+RVF+PM K+KK      W+P SH V+YGV LD  GNV
Sbjct: 98   VGGPPAAVGIVRLSGPSAVDVAARVFKPMSKKKKK---KIWQPTSHVVDYGVALDNEGNV 154

Query: 1349 VDEVLAVPMLAPRSYTREDVVELQCHGNDVCLRRVLRACLEAGARLAEPGEFTLRAFLNG 1170
            +DEVLA+PML+PRSYT EDVVELQCHG++VCL RVLRACL+AGARLAEPGEFTLRAFLNG
Sbjct: 155  IDEVLALPMLSPRSYTCEDVVELQCHGSEVCLTRVLRACLQAGARLAEPGEFTLRAFLNG 214

Query: 1169 RLDLSQAENIEKLISAKSVATADAALAGIQGGFSALVKSLRRQCVELPTEIEARLDFDDE 990
            R+DLSQAEN+ KLISA SV  ADAALAG+QGGF++L+KSLR QC+EL TEIEARLDFDDE
Sbjct: 215  RVDLSQAENVGKLISANSVTAADAALAGLQGGFASLIKSLRAQCIELLTEIEARLDFDDE 274

Query: 989  MPSLDSHSLMDMIHGMCLDVEKALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSK 816
            MP LD + ++D IH M  D+E ALETANYDKLLQSGLQIA+VGRPNVGKSSLLNAWSK
Sbjct: 275  MPPLDLNLIVDRIHVMSQDIEIALETANYDKLLQSGLQIALVGRPNVGKSSLLNAWSK 332



 Score =  324 bits (830), Expect(2) = 0.0
 Identities = 166/233 (71%), Positives = 193/233 (82%)
 Frame = -3

Query: 832  SMHGANMQSEKAIVTEIAGTTRDVVEASINVHGIPITLLDTAGIRETEDIVEKIGVERSE 653
            S+  A  +SE+AIVTEIAGTTRDVVEA + V GIP+TLLDTAGIRET+DIVEKIGVERSE
Sbjct: 325  SLLNAWSKSERAIVTEIAGTTRDVVEAGVTVGGIPVTLLDTAGIRETDDIVEKIGVERSE 384

Query: 652  AVAMGADVIIMTVSAMDGWTSDDAELLERIQVNQEITGSCAPMILVINKIDCAPSESVET 473
            AVAMGADVII+T+SA DGWTS+D+ELL RI+ N++  GS  P++L INKID APS S+E 
Sbjct: 385  AVAMGADVIILTISAFDGWTSEDSELLSRIESNKKSVGSSTPVVLAINKIDTAPSLSMEW 444

Query: 472  LKRVVTPFNKHVLTCAVNGQGIPDLESALVEIAGLDRIPAGGRRWAVKQRQFEQLVQTKE 293
            + R    F+KHV TCAV GQGI +LE A+ EI GL+RIP GGR+W V QRQ EQL++TKE
Sbjct: 445  IGRYSKAFSKHVFTCAVTGQGIKELEMAISEIVGLNRIPTGGRKWTVNQRQCEQLMRTKE 504

Query: 292  ALMRLKSSIEEEMPLDCWTIDLREAALALAQISGEDICEEVLSNILSKFCIGK 134
            AL RLKSSI++EMPLD WTIDLR+AALAL QISGE I EEVLSNI  KFCIGK
Sbjct: 505  ALARLKSSIKDEMPLDFWTIDLRDAALALGQISGEGISEEVLSNIFGKFCIGK 557


>ref|XP_003522812.1| PREDICTED: tRNA modification GTPase MnmE-like [Glycine max]
          Length = 520

 Score =  363 bits (933), Expect(2) = 0.0
 Identities = 187/238 (78%), Positives = 202/238 (84%)
 Frame = -2

Query: 1529 LGTQPGAVGIVRLSGPSAVDVASRVFRPMGKRKKSLGTSCWRPRSHFVEYGVVLDRGGNV 1350
            +G  P AVGIVRLSGP AV +A RVFRP  K         WRP SH VEYGVVLD  GNV
Sbjct: 65   VGGPPAAVGIVRLSGPGAVSIAGRVFRPARKT--------WRPTSHVVEYGVVLDSDGNV 116

Query: 1349 VDEVLAVPMLAPRSYTREDVVELQCHGNDVCLRRVLRACLEAGARLAEPGEFTLRAFLNG 1170
            +DEVLAVPMLAPRSYTREDVVELQCHG++VCLRRVLR CLEAGA LA+PGEFTLRAFLNG
Sbjct: 117  IDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRTCLEAGATLAQPGEFTLRAFLNG 176

Query: 1169 RLDLSQAENIEKLISAKSVATADAALAGIQGGFSALVKSLRRQCVELPTEIEARLDFDDE 990
            RLDLSQAEN+ +LI+AKSVA ADAAL GIQGGFS+LV+SLR QC+EL TEIEARLDFDDE
Sbjct: 177  RLDLSQAENVARLIAAKSVAAADAALEGIQGGFSSLVRSLRSQCIELLTEIEARLDFDDE 236

Query: 989  MPSLDSHSLMDMIHGMCLDVEKALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSK 816
            MP LD + +MD IH M  +VE ALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSK
Sbjct: 237  MPPLDLNLIMDKIHNMSREVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSK 294



 Score =  316 bits (809), Expect(2) = 0.0
 Identities = 164/234 (70%), Positives = 194/234 (82%), Gaps = 1/234 (0%)
 Frame = -3

Query: 832 SMHGANMQSEKAIVTEIAGTTRDVVEASINVHGIPITLLDTAGIRETEDIVEKIGVERSE 653
           S+  A  +SE+AIVTEIAGTTRDV+EASI+V GIPITLLDTAGIR+T+DIVEKIGVERSE
Sbjct: 287 SLLNAWSKSERAIVTEIAGTTRDVIEASISVSGIPITLLDTAGIRDTDDIVEKIGVERSE 346

Query: 652 AVAMGADVIIMTVSAMDGWTSDDAELLERIQVNQEITGSCAPMILVINKIDCAPSESVET 473
           AVA GAD+IIMT+SA++GWTS+D +LLERIQ  +  TGS  P+ILV+NKIDC P    E 
Sbjct: 347 AVARGADLIIMTMSAVEGWTSEDTKLLERIQSTKGSTGSSTPVILVVNKIDCKPCAETEW 406

Query: 472 LKRVVTP-FNKHVLTCAVNGQGIPDLESALVEIAGLDRIPAGGRRWAVKQRQFEQLVQTK 296
            K      F+KHV TCAV GQG+ DLE A+++I GL+ IPAGGRRW V QRQ EQLV+TK
Sbjct: 407 DKGCQNHIFSKHVFTCAVTGQGLHDLEGAVLQIVGLEGIPAGGRRWTVNQRQCEQLVRTK 466

Query: 295 EALMRLKSSIEEEMPLDCWTIDLREAALALAQISGEDICEEVLSNILSKFCIGK 134
           EAL+RL+SSI++E+PLD WTIDLR+AAL+L QISGEDI EEVLSNI  KFCIGK
Sbjct: 467 EALVRLQSSIKDELPLDFWTIDLRDAALSLGQISGEDISEEVLSNIFGKFCIGK 520


>ref|XP_003638789.1| tRNA modification GTPase mnmE [Medicago truncatula]
            gi|355504724|gb|AES85927.1| tRNA modification GTPase mnmE
            [Medicago truncatula]
          Length = 543

 Score =  365 bits (936), Expect(2) = 0.0
 Identities = 188/238 (78%), Positives = 202/238 (84%)
 Frame = -2

Query: 1529 LGTQPGAVGIVRLSGPSAVDVASRVFRPMGKRKKSLGTSCWRPRSHFVEYGVVLDRGGNV 1350
            LG  P AVGIVRLSGP AV +A RVFRP          + WRP SH VEYGVVLD  GNV
Sbjct: 87   LGGPPAAVGIVRLSGPHAVSIAGRVFRP--------ARNTWRPTSHVVEYGVVLDSDGNV 138

Query: 1349 VDEVLAVPMLAPRSYTREDVVELQCHGNDVCLRRVLRACLEAGARLAEPGEFTLRAFLNG 1170
            VDEV+AVPMLAPRSYTREDVVELQCHGN+VCLRRVLR CLEAGA LA+PGEFTLRAFLNG
Sbjct: 139  VDEVIAVPMLAPRSYTREDVVELQCHGNEVCLRRVLRICLEAGATLAQPGEFTLRAFLNG 198

Query: 1169 RLDLSQAENIEKLISAKSVATADAALAGIQGGFSALVKSLRRQCVELPTEIEARLDFDDE 990
            RLDLSQAEN+ KLI+AKSVA ADAAL GIQGGFS+LV+SLR QC++L TEIEARLDF+DE
Sbjct: 199  RLDLSQAENVGKLIAAKSVAAADAALEGIQGGFSSLVRSLRNQCIDLLTEIEARLDFEDE 258

Query: 989  MPSLDSHSLMDMIHGMCLDVEKALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSK 816
            MP LD + +MD IH M  DVE ALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSK
Sbjct: 259  MPPLDLNGIMDKIHHMSQDVENALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSK 316



 Score =  314 bits (805), Expect(2) = 0.0
 Identities = 163/235 (69%), Positives = 195/235 (82%), Gaps = 2/235 (0%)
 Frame = -3

Query: 832  SMHGANMQSEKAIVTEIAGTTRDVVEASINVHGIPITLLDTAGIRETEDIVEKIGVERSE 653
            S+  A  +SE+AIVTEIAGTTRDV+EASIN++GIPITLLDTAGIR+T+DIVEKIGVERSE
Sbjct: 309  SLLNAWSKSERAIVTEIAGTTRDVIEASININGIPITLLDTAGIRDTDDIVEKIGVERSE 368

Query: 652  AVAMGADVIIMTVSAMDGWTSDDAELLERIQVNQEITGSCAPMILVINKIDCAPSESVET 473
            AVA GAD+IIMTVSA++GWTS+D +LLERIQ  +E TGS  P+ILV+NKIDC P    E 
Sbjct: 369  AVARGADLIIMTVSAVEGWTSEDTKLLERIQSAKESTGSSTPVILVVNKIDCKPCAETEW 428

Query: 472  LKRVVTP--FNKHVLTCAVNGQGIPDLESALVEIAGLDRIPAGGRRWAVKQRQFEQLVQT 299
             K + +   F+K V TCAV  QG+ DLE A++EI G+D I +GGRRW V QRQ EQLV+T
Sbjct: 429  DKGMHSHKIFSKQVFTCAVTSQGLQDLERAVLEIVGMDGIASGGRRWTVNQRQCEQLVRT 488

Query: 298  KEALMRLKSSIEEEMPLDCWTIDLREAALALAQISGEDICEEVLSNILSKFCIGK 134
            KEAL+RL+SSI+EE+P+D WTIDLR+AAL+L QISGEDI EEVLSNI  KFCIGK
Sbjct: 489  KEALVRLQSSIKEELPMDFWTIDLRDAALSLGQISGEDISEEVLSNIFGKFCIGK 543