BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024679
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22748.3| unnamed protein product [Vitis vinifera]              392   e-107
ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containi...   392   e-107
ref|XP_003571952.1| PREDICTED: pentatricopeptide repeat-containi...   376   e-102
ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containi...   375   e-102
ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containi...   374   e-101

>emb|CBI22748.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  392 bits (1007), Expect = e-107
 Identities = 178/229 (77%), Positives = 211/229 (92%)
 Frame = +3

Query: 3   CTCGEVGLARKLVERFIKSKTFNFRPFKHSFNAILHSLLVIHQYRLVEWVYQQMVLEGHS 182
           CTCGE GLAR+ VERF+KSK FN+RPFKHS+NAILH LL + QY+LVEWVYQQM+LE +S
Sbjct: 236 CTCGEAGLARRAVERFVKSKNFNYRPFKHSYNAILHCLLCLKQYKLVEWVYQQMLLEDYS 295

Query: 183 PDILTYNVLMCTKYRLGKLDQFHRLLDDMCKNGFSPDLHTYNILLHVLGEGDKPLAALNL 362
           PDILTYN++MCTKYRLGKLDQFHRLL+++  NGFSPD HT+NILLH+LG+G+KPLAAL+L
Sbjct: 296 PDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFHTFNILLHLLGKGNKPLAALDL 355

Query: 363 MNHMKEVGCEPRVIHFTSLIDGLSRAGNLEACKYFFDEMVKIGCMPDVVCYTVMITGYVV 542
           +NHMKEVG +P V+HFT+LIDGLSRAGNL+ACKYFFDEM+K+GCMPDVVCYTVMITGY+V
Sbjct: 356 LNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLGCMPDVVCYTVMITGYIV 415

Query: 543 AGEFEKAQTMFDEMTIKGQLPNVYTYNAMIRGLCAARKFDEACSMLREM 689
           AGE E AQ +F+EMT+KGQLPNV+TYN+MIRGLC A KF+EA SML+EM
Sbjct: 416 AGELEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSMLKEM 464



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 35/144 (24%), Positives = 64/144 (44%)
 Frame = +3

Query: 60  KTFNFRPFKHSFNAILHSLLVIHQYRLVEWVYQQMVLEGHSPDILTYNVLMCTKYRLGKL 239
           K   F P    F  ++  L         ++ + +M+  G  PD++ Y V++      G+L
Sbjct: 360 KEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLGCMPDVVCYTVMITGYIVAGEL 419

Query: 240 DQFHRLLDDMCKNGFSPDLHTYNILLHVLGEGDKPLAALNLMNHMKEVGCEPRVIHFTSL 419
           +    L ++M   G  P++ TYN ++  L   +K   A +++  M+  GC P  + + +L
Sbjct: 420 EMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSMLKEMESRGCNPNFLVYNTL 479

Query: 420 IDGLSRAGNLEACKYFFDEMVKIG 491
           +  L  AG L+        MV  G
Sbjct: 480 VGNLRNAGKLKEAHEVIRHMVDKG 503


>ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Vitis vinifera]
          Length = 514

 Score =  392 bits (1007), Expect = e-107
 Identities = 178/229 (77%), Positives = 211/229 (92%)
 Frame = +3

Query: 3   CTCGEVGLARKLVERFIKSKTFNFRPFKHSFNAILHSLLVIHQYRLVEWVYQQMVLEGHS 182
           CTCGE GLAR+ VERF+KSK FN+RPFKHS+NAILH LL + QY+LVEWVYQQM+LE +S
Sbjct: 232 CTCGEAGLARRAVERFVKSKNFNYRPFKHSYNAILHCLLCLKQYKLVEWVYQQMLLEDYS 291

Query: 183 PDILTYNVLMCTKYRLGKLDQFHRLLDDMCKNGFSPDLHTYNILLHVLGEGDKPLAALNL 362
           PDILTYN++MCTKYRLGKLDQFHRLL+++  NGFSPD HT+NILLH+LG+G+KPLAAL+L
Sbjct: 292 PDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFHTFNILLHLLGKGNKPLAALDL 351

Query: 363 MNHMKEVGCEPRVIHFTSLIDGLSRAGNLEACKYFFDEMVKIGCMPDVVCYTVMITGYVV 542
           +NHMKEVG +P V+HFT+LIDGLSRAGNL+ACKYFFDEM+K+GCMPDVVCYTVMITGY+V
Sbjct: 352 LNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLGCMPDVVCYTVMITGYIV 411

Query: 543 AGEFEKAQTMFDEMTIKGQLPNVYTYNAMIRGLCAARKFDEACSMLREM 689
           AGE E AQ +F+EMT+KGQLPNV+TYN+MIRGLC A KF+EA SML+EM
Sbjct: 412 AGELEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSMLKEM 460



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 35/144 (24%), Positives = 64/144 (44%)
 Frame = +3

Query: 60  KTFNFRPFKHSFNAILHSLLVIHQYRLVEWVYQQMVLEGHSPDILTYNVLMCTKYRLGKL 239
           K   F P    F  ++  L         ++ + +M+  G  PD++ Y V++      G+L
Sbjct: 356 KEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLGCMPDVVCYTVMITGYIVAGEL 415

Query: 240 DQFHRLLDDMCKNGFSPDLHTYNILLHVLGEGDKPLAALNLMNHMKEVGCEPRVIHFTSL 419
           +    L ++M   G  P++ TYN ++  L   +K   A +++  M+  GC P  + + +L
Sbjct: 416 EMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEARSMLKEMESRGCNPNFLVYNTL 475

Query: 420 IDGLSRAGNLEACKYFFDEMVKIG 491
           +  L  AG L+        MV  G
Sbjct: 476 VGNLRNAGKLKEAHEVIRHMVDKG 499


>ref|XP_003571952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Brachypodium distachyon]
          Length = 501

 Score =  376 bits (965), Expect = e-102
 Identities = 170/229 (74%), Positives = 204/229 (89%)
 Frame = +3

Query: 3   CTCGEVGLARKLVERFIKSKTFNFRPFKHSFNAILHSLLVIHQYRLVEWVYQQMVLEGHS 182
           CTCG+ GL R+LVERFIKS +FN+RPF++SFNAILH+LL I QY L+EWV+Q+M++EGHS
Sbjct: 219 CTCGQAGLRRRLVERFIKSSSFNYRPFRNSFNAILHTLLTIEQYSLIEWVHQKMLMEGHS 278

Query: 183 PDILTYNVLMCTKYRLGKLDQFHRLLDDMCKNGFSPDLHTYNILLHVLGEGDKPLAALNL 362
           PD+LTYN++M  KY LGKLDQFHRLLD+M KNG +PDLHTYNILLHVLG+GDKPLAALNL
Sbjct: 279 PDVLTYNIVMRAKYMLGKLDQFHRLLDEMGKNGLTPDLHTYNILLHVLGKGDKPLAALNL 338

Query: 363 MNHMKEVGCEPRVIHFTSLIDGLSRAGNLEACKYFFDEMVKIGCMPDVVCYTVMITGYVV 542
           +N+M +VGC P V+HFT+LIDGLSRAGNLEACKYFFDEM+K GC PDVVCYTVMITGYV 
Sbjct: 339 LNYMSDVGCVPSVLHFTNLIDGLSRAGNLEACKYFFDEMMKKGCEPDVVCYTVMITGYVA 398

Query: 543 AGEFEKAQTMFDEMTIKGQLPNVYTYNAMIRGLCAARKFDEACSMLREM 689
           A E E+AQ +FD+M ++G+LPNVYTYN MIRGLC   +FD+ACSML++M
Sbjct: 399 AAELEEAQKLFDDMLVRGKLPNVYTYNTMIRGLCIVGEFDKACSMLKDM 447



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 43/186 (23%), Positives = 82/186 (44%)
 Frame = +3

Query: 132 YRLVEWVYQQMVLEGHSPDILTYNVLMCTKYRLGKLDQFHRLLDDMCKNGFSPDLHTYNI 311
           Y+   W  QQ   EG+      YN++M    + G++    RLL++M +NG S    T+++
Sbjct: 160 YKFFLWAGQQ---EGYHHSTGMYNLVMKVFAQCGEVKAMWRLLEEMTENGLSISARTFHL 216

Query: 312 LLHVLGEGDKPLAALNLMNHMKEVGCEPRVIHFTSLIDGLSRAGNLEACKYFFDEMVKIG 491
           L+   G+       +            P    F +++  L         ++   +M+  G
Sbjct: 217 LICTCGQAGLRRRLVERFIKSSSFNYRPFRNSFNAILHTLLTIEQYSLIEWVHQKMLMEG 276

Query: 492 CMPDVVCYTVMITGYVVAGEFEKAQTMFDEMTIKGQLPNVYTYNAMIRGLCAARKFDEAC 671
             PDV+ Y +++    + G+ ++   + DEM   G  P+++TYN ++  L    K   A 
Sbjct: 277 HSPDVLTYNIVMRAKYMLGKLDQFHRLLDEMGKNGLTPDLHTYNILLHVLGKGDKPLAAL 336

Query: 672 SMLREM 689
           ++L  M
Sbjct: 337 NLLNYM 342


>ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Glycine max]
          Length = 480

 Score =  375 bits (964), Expect = e-102
 Identities = 174/228 (76%), Positives = 205/228 (89%)
 Frame = +3

Query: 6   TCGEVGLARKLVERFIKSKTFNFRPFKHSFNAILHSLLVIHQYRLVEWVYQQMVLEGHSP 185
           TCGE GLA+ LVERFIKSKTFNFRPFKHS+NAILH LLV++QY+L+EWVYQQ++L+G S 
Sbjct: 200 TCGEAGLAKSLVERFIKSKTFNFRPFKHSYNAILHGLLVLNQYKLIEWVYQQLLLDGFSS 259

Query: 186 DILTYNVLMCTKYRLGKLDQFHRLLDDMCKNGFSPDLHTYNILLHVLGEGDKPLAALNLM 365
           DILTYN++M  KYRLGKLDQFHRLLD+M +NGFSPD HT+NILLHVLG+GDKPLAALNL+
Sbjct: 260 DILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNLL 319

Query: 366 NHMKEVGCEPRVIHFTSLIDGLSRAGNLEACKYFFDEMVKIGCMPDVVCYTVMITGYVVA 545
           NHM+E+G EP V+HFT+LIDGLSRAGNL+ACKYFFDEM+K GC+PDVV YTVMITGYVVA
Sbjct: 320 NHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNGCIPDVVAYTVMITGYVVA 379

Query: 546 GEFEKAQTMFDEMTIKGQLPNVYTYNAMIRGLCAARKFDEACSMLREM 689
           GE EKA  M+  M  + Q+PNV+TYN++I+GLC A KFDEACSML+EM
Sbjct: 380 GEIEKALKMYQYMISREQVPNVFTYNSIIQGLCMAGKFDEACSMLKEM 427



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/186 (20%), Positives = 80/186 (43%)
 Frame = +3

Query: 132 YRLVEWVYQQMVLEGHSPDILTYNVLMCTKYRLGKLDQFHRLLDDMCKNGFSPDLHTYNI 311
           Y+   W  QQ   EG+   +  Y+++M       +     RL+D+M + G      T+NI
Sbjct: 140 YKFFVWCSQQ---EGYQHTVNAYHLVMNIYAECEEFKALWRLVDEMVEKGLPATARTFNI 196

Query: 312 LLHVLGEGDKPLAALNLMNHMKEVGCEPRVIHFTSLIDGLSRAGNLEACKYFFDEMVKIG 491
           L+   GE     + +      K     P    + +++ GL      +  ++ + +++  G
Sbjct: 197 LIRTCGEAGLAKSLVERFIKSKTFNFRPFKHSYNAILHGLLVLNQYKLIEWVYQQLLLDG 256

Query: 492 CMPDVVCYTVMITGYVVAGEFEKAQTMFDEMTIKGQLPNVYTYNAMIRGLCAARKFDEAC 671
              D++ Y +++      G+ ++   + DEM   G  P+ +T+N ++  L    K   A 
Sbjct: 257 FSSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAAL 316

Query: 672 SMLREM 689
           ++L  M
Sbjct: 317 NLLNHM 322


>ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like isoform 1 [Glycine max]
           gi|356575967|ref|XP_003556107.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g60050-like isoform 2 [Glycine max]
          Length = 480

 Score =  374 bits (960), Expect = e-101
 Identities = 174/228 (76%), Positives = 203/228 (89%)
 Frame = +3

Query: 6   TCGEVGLARKLVERFIKSKTFNFRPFKHSFNAILHSLLVIHQYRLVEWVYQQMVLEGHSP 185
           TCGE GLA+ LVERFIKSKTFNFRPFKHS+NAILH LLV++QY+L+EWVYQQM+L+G   
Sbjct: 200 TCGEAGLAKNLVERFIKSKTFNFRPFKHSYNAILHGLLVLNQYKLIEWVYQQMLLDGFPS 259

Query: 186 DILTYNVLMCTKYRLGKLDQFHRLLDDMCKNGFSPDLHTYNILLHVLGEGDKPLAALNLM 365
           DILTYN++M  KYRLGKLDQFHRLLD+M +NGFSPD HT+NILLHVLG+GDKPLAALNL+
Sbjct: 260 DILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNLL 319

Query: 366 NHMKEVGCEPRVIHFTSLIDGLSRAGNLEACKYFFDEMVKIGCMPDVVCYTVMITGYVVA 545
           NHM+E+G EP V+HFT+LIDGLSRAGNL+ACKYFFDEM+K  C PDVV YTVMITGYVVA
Sbjct: 320 NHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNECRPDVVAYTVMITGYVVA 379

Query: 546 GEFEKAQTMFDEMTIKGQLPNVYTYNAMIRGLCAARKFDEACSMLREM 689
           GE EKA  M+ +M  + Q+PNV+TYN++IRGLC A KFDEACSML+EM
Sbjct: 380 GEIEKALEMYQDMISREQVPNVFTYNSIIRGLCMAGKFDEACSMLKEM 427



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 40/186 (21%), Positives = 79/186 (42%)
 Frame = +3

Query: 132 YRLVEWVYQQMVLEGHSPDILTYNVLMCTKYRLGKLDQFHRLLDDMCKNGFSPDLHTYNI 311
           Y+   W  QQ   EG+   +  Y+++M       +     RL+D+M + G      T+NI
Sbjct: 140 YKFFVWCSQQ---EGYQHTVNAYHLVMSIYAECEEFKALWRLVDEMIEKGLPATARTFNI 196

Query: 312 LLHVLGEGDKPLAALNLMNHMKEVGCEPRVIHFTSLIDGLSRAGNLEACKYFFDEMVKIG 491
           L+   GE       +      K     P    + +++ GL      +  ++ + +M+  G
Sbjct: 197 LIRTCGEAGLAKNLVERFIKSKTFNFRPFKHSYNAILHGLLVLNQYKLIEWVYQQMLLDG 256

Query: 492 CMPDVVCYTVMITGYVVAGEFEKAQTMFDEMTIKGQLPNVYTYNAMIRGLCAARKFDEAC 671
              D++ Y +++      G+ ++   + DEM   G  P+ +T+N ++  L    K   A 
Sbjct: 257 FPSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAAL 316

Query: 672 SMLREM 689
           ++L  M
Sbjct: 317 NLLNHM 322