BLASTX nr result

ID: Coptis21_contig00024675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024675
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300115.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_002328938.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
emb|CBI21334.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_002270989.1| PREDICTED: uncharacterized protein LOC100251...   113   1e-23
ref|XP_003549164.1| PREDICTED: uncharacterized protein LOC100306...   112   4e-23

>ref|XP_002300115.1| predicted protein [Populus trichocarpa] gi|222847373|gb|EEE84920.1|
           predicted protein [Populus trichocarpa]
          Length = 68

 Score =  115 bits (289), Expect = 3e-24
 Identities = 51/65 (78%), Positives = 62/65 (95%)
 Frame = -1

Query: 195 MGTDWGPVIVAVVLFILLSPGLLFQIPARTRFVEFGNMYTSGLSILVHAILFFCILTVLV 16
           M  DWGPV+VAVVLFILLSPGLLFQ+PARTR VEFGNMYTSG++ILVHA+++FCI+T+L+
Sbjct: 1   MSADWGPVVVAVVLFILLSPGLLFQLPARTRVVEFGNMYTSGIAILVHAVIYFCIITILI 60

Query: 15  IAIGV 1
           IA+GV
Sbjct: 61  IAVGV 65


>ref|XP_002328938.1| predicted protein [Populus trichocarpa] gi|222839368|gb|EEE77705.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score =  115 bits (288), Expect = 4e-24
 Identities = 52/65 (80%), Positives = 62/65 (95%)
 Frame = -1

Query: 195 MGTDWGPVIVAVVLFILLSPGLLFQIPARTRFVEFGNMYTSGLSILVHAILFFCILTVLV 16
           M  DWGPV+VAVVLFI+LSPGLLFQ+PARTR VEFGNMYTSG+SILVHA+++FCI+T+L+
Sbjct: 1   MKADWGPVVVAVVLFIVLSPGLLFQLPARTRVVEFGNMYTSGISILVHAVIYFCIITILI 60

Query: 15  IAIGV 1
           IAIGV
Sbjct: 61  IAIGV 65


>emb|CBI21334.3| unnamed protein product [Vitis vinifera]
          Length = 80

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/65 (78%), Positives = 62/65 (95%)
 Frame = -1

Query: 195 MGTDWGPVIVAVVLFILLSPGLLFQIPARTRFVEFGNMYTSGLSILVHAILFFCILTVLV 16
           MG DWGPV+V+VVLFILLSPGLLFQ+PARTR VEFGNM TSG++ILVHAI++FCILT+L+
Sbjct: 11  MGADWGPVVVSVVLFILLSPGLLFQLPARTRVVEFGNMCTSGIAILVHAIIYFCILTILL 70

Query: 15  IAIGV 1
           IA+G+
Sbjct: 71  IAVGI 75


>ref|XP_002270989.1| PREDICTED: uncharacterized protein LOC100251434 [Vitis vinifera]
          Length = 70

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/65 (78%), Positives = 62/65 (95%)
 Frame = -1

Query: 195 MGTDWGPVIVAVVLFILLSPGLLFQIPARTRFVEFGNMYTSGLSILVHAILFFCILTVLV 16
           MG DWGPV+V+VVLFILLSPGLLFQ+PARTR VEFGNM TSG++ILVHAI++FCILT+L+
Sbjct: 1   MGADWGPVVVSVVLFILLSPGLLFQLPARTRVVEFGNMCTSGIAILVHAIIYFCILTILL 60

Query: 15  IAIGV 1
           IA+G+
Sbjct: 61  IAVGI 65


>ref|XP_003549164.1| PREDICTED: uncharacterized protein LOC100306597 [Glycine max]
           gi|255629015|gb|ACU14852.1| unknown [Glycine max]
          Length = 70

 Score =  112 bits (279), Expect = 4e-23
 Identities = 52/65 (80%), Positives = 59/65 (90%)
 Frame = -1

Query: 195 MGTDWGPVIVAVVLFILLSPGLLFQIPARTRFVEFGNMYTSGLSILVHAILFFCILTVLV 16
           MG DWGPVI+AV LFILLSPGLLFQ PAR R VEFGNM TSG++ILVHAI+FFCILT+LV
Sbjct: 1   MGADWGPVIIAVALFILLSPGLLFQFPARYRVVEFGNMSTSGIAILVHAIIFFCILTILV 60

Query: 15  IAIGV 1
           +AIG+
Sbjct: 61  VAIGI 65


Top