BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024666
         (197 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_195528.1| pentatricopeptide repeat-containing protein [Ar...   105   5e-21
gb|AAL77701.1| AT4g38150/F20D10_270 [Arabidopsis thaliana] gi|23...   105   5e-21
ref|XP_002868835.1| pentatricopeptide repeat-containing protein ...   103   1e-20
ref|XP_003537572.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_002283311.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20

>ref|NP_195528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|79326453|ref|NP_001031806.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|75266764|sp|Q9SZL5.1|PP356_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g38150 gi|4467121|emb|CAB37555.1| putative protein
           [Arabidopsis thaliana] gi|7270799|emb|CAB80480.1|
           putative protein [Arabidopsis thaliana]
           gi|26453272|dbj|BAC43709.1| unknown protein [Arabidopsis
           thaliana] gi|332661484|gb|AEE86884.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332661485|gb|AEE86885.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 302

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/62 (82%), Positives = 54/62 (87%)
 Frame = +2

Query: 11  PTTNNEEASSPPQDSDEIFKKMKETGLIPNAVAMLDGLCKDGLVQDAMKLFGLMRDKGTI 190
           P    +E   PP+DSDEIFKKMKE GLIPNAVAMLDGLCKDGLVQ+AMKLFGLMRDKGTI
Sbjct: 104 PEQYPQEPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTI 163

Query: 191 PE 196
           PE
Sbjct: 164 PE 165


>gb|AAL77701.1| AT4g38150/F20D10_270 [Arabidopsis thaliana]
           gi|23505863|gb|AAN28791.1| At4g38150/F20D10_270
           [Arabidopsis thaliana]
          Length = 302

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/62 (82%), Positives = 54/62 (87%)
 Frame = +2

Query: 11  PTTNNEEASSPPQDSDEIFKKMKETGLIPNAVAMLDGLCKDGLVQDAMKLFGLMRDKGTI 190
           P    +E   PP+DSDEIFKKMKE GLIPNAVAMLDGLCKDGLVQ+AMKLFGLMRDKGTI
Sbjct: 104 PEQYPQEPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTI 163

Query: 191 PE 196
           PE
Sbjct: 164 PE 165


>ref|XP_002868835.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314671|gb|EFH45094.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 301

 Score =  103 bits (257), Expect = 1e-20
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = +2

Query: 41  PPQDSDEIFKKMKETGLIPNAVAMLDGLCKDGLVQDAMKLFGLMRDKGTIPE 196
           PP+DSDEIFKKMKE GLIPNAVAMLDGLCKDGLVQ+AMKLFGLMRDKGTIPE
Sbjct: 113 PPEDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPE 164


>ref|XP_003537572.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Glycine max]
          Length = 388

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/64 (78%), Positives = 54/64 (84%)
 Frame = +2

Query: 5   KGPTTNNEEASSPPQDSDEIFKKMKETGLIPNAVAMLDGLCKDGLVQDAMKLFGLMRDKG 184
           K    N     S PQD+DEIFKKMKETGLIPNAVAMLDGLCKDGLVQ+A+KLFGLMR+KG
Sbjct: 188 KRSNPNQPAQESMPQDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKG 247

Query: 185 TIPE 196
           TIPE
Sbjct: 248 TIPE 251


>ref|XP_002283311.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Vitis vinifera]
          Length = 380

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/58 (81%), Positives = 53/58 (91%)
 Frame = +2

Query: 23  NEEASSPPQDSDEIFKKMKETGLIPNAVAMLDGLCKDGLVQDAMKLFGLMRDKGTIPE 196
           N     PPQ++DEIF+KMKE+GLIPNAVAMLDGLCKDGLVQ+AMKLFGLMR+KGTIPE
Sbjct: 186 NHGKEQPPQNADEIFRKMKESGLIPNAVAMLDGLCKDGLVQEAMKLFGLMREKGTIPE 243