BLASTX nr result

ID: Coptis21_contig00024655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024655
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524401.1| basic 7S globulin 2 precursor small subunit,...   249   7e-64
ref|XP_002278677.2| PREDICTED: aspartic proteinase nepenthesin-1...   244   1e-62
ref|NP_189198.1| aspartyl protease family protein [Arabidopsis t...   234   1e-59
ref|XP_002875271.1| hypothetical protein ARALYDRAFT_484331 [Arab...   231   1e-58
ref|XP_002311432.1| predicted protein [Populus trichocarpa] gi|2...   231   1e-58

>ref|XP_002524401.1| basic 7S globulin 2 precursor small subunit, putative [Ricinus
           communis] gi|223536362|gb|EEF38012.1| basic 7S globulin
           2 precursor small subunit, putative [Ricinus communis]
          Length = 455

 Score =  249 bits (635), Expect = 7e-64
 Identities = 118/180 (65%), Positives = 140/180 (77%)
 Frame = +2

Query: 2   SIRSKPKMSFTPLQTNPISPTFYYIGIKSVLINGVNLRIDPSVWVFSQDGSGGTVIDSGT 181
           ++  K  MSFTPL  NP+SPTFYYI IK V +NGV L I+PSVW     G+GGT+IDSGT
Sbjct: 275 AVSKKGIMSFTPLLINPLSPTFYYIAIKGVYVNGVKLPINPSVWSIDDLGNGGTIIDSGT 334

Query: 182 TLSFLAEPAYLQILTAFKKRVKYPIVDDPSLSFELCVNVSDLVNPSLPRLSFKLVGNSVF 361
           TL+F+ EPAY +IL AFKKRVK P   +P+  F+LC+NVS +  P+LPR+SF L G SVF
Sbjct: 335 TLTFITEPAYTEILKAFKKRVKLPSPAEPTPGFDLCMNVSGVTRPALPRMSFNLAGGSVF 394

Query: 362 SPPPANYFIDVADGIKCLALQSVSSESGFSVIGNLMQQGFLFEFDRDKSRLGFTRRGCGI 541
           SPPP NYFI+  D IKCLA+Q VS + GFSV+GNLMQQGFL EFDRDKSRLGFTRRGC +
Sbjct: 395 SPPPRNYFIETGDQIKCLAVQPVSQDGGFSVLGNLMQQGFLLEFDRDKSRLGFTRRGCAL 454


>ref|XP_002278677.2| PREDICTED: aspartic proteinase nepenthesin-1-like [Vitis vinifera]
          Length = 458

 Score =  244 bits (624), Expect = 1e-62
 Identities = 112/176 (63%), Positives = 144/176 (81%)
 Frame = +2

Query: 14  KPKMSFTPLQTNPISPTFYYIGIKSVLINGVNLRIDPSVWVFSQDGSGGTVIDSGTTLSF 193
           K +M FTPL  NP+SPTFYYIGI+SV ++G+ L I+PSVW   + G+GGT++DSGTTL+F
Sbjct: 282 KRRMRFTPLHINPLSPTFYYIGIESVSVDGIKLPINPSVWALDELGNGGTIVDSGTTLTF 341

Query: 194 LAEPAYLQILTAFKKRVKYPIVDDPSLSFELCVNVSDLVNPSLPRLSFKLVGNSVFSPPP 373
           L EPAYLQILT  K+RV+ P   +P+  F+LCVNVS++ +P LP+LSFKL G+SVFSPPP
Sbjct: 342 LPEPAYLQILTVIKRRVRLPSPAEPTPGFDLCVNVSEIEHPRLPKLSFKLGGDSVFSPPP 401

Query: 374 ANYFIDVADGIKCLALQSVSSESGFSVIGNLMQQGFLFEFDRDKSRLGFTRRGCGI 541
            NYF+D  + +KCLALQ+V + SGFSVIGNLMQQGFL EFD+D++RLGF+R GC +
Sbjct: 402 RNYFVDTDEDVKCLALQAVMTPSGFSVIGNLMQQGFLLEFDKDRTRLGFSRHGCAL 457


>ref|NP_189198.1| aspartyl protease family protein [Arabidopsis thaliana]
           gi|11994761|dbj|BAB03090.1| chloroplast nucleoid DNA
           binding protein-like; nucellin-like protein [Arabidopsis
           thaliana] gi|189339286|gb|ACD89063.1| At3g25700
           [Arabidopsis thaliana] gi|332643533|gb|AEE77054.1|
           aspartyl protease family protein [Arabidopsis thaliana]
          Length = 452

 Score =  234 bits (598), Expect = 1e-59
 Identities = 110/176 (62%), Positives = 136/176 (77%), Gaps = 2/176 (1%)
 Frame = +2

Query: 20  KMSFTPLQTNPISPTFYYIGIKSVLINGVNLRIDPSVWVFSQDGSGGTVIDSGTTLSFLA 199
           K+ FTPL TNP+SPTFYY+ +KSV +NG  LRIDPS+W     G+GGTV+DSGTTL+FLA
Sbjct: 276 KLFFTPLLTNPLSPTFYYVKLKSVFVNGAKLRIDPSIWEIDDSGNGGTVVDSGTTLAFLA 335

Query: 200 EPAYLQILTAFKKRVKYPIVDDPSLSFELCVNVSDLVNPS--LPRLSFKLVGNSVFSPPP 373
           EPAY  ++ A ++RVK PI D  +  F+LCVNVS +  P   LPRL F+  G +VF PPP
Sbjct: 336 EPAYRSVIAAVRRRVKLPIADALTPGFDLCVNVSGVTKPEKILPRLKFEFSGGAVFVPPP 395

Query: 374 ANYFIDVADGIKCLALQSVSSESGFSVIGNLMQQGFLFEFDRDKSRLGFTRRGCGI 541
            NYFI+  + I+CLA+QSV  + GFSVIGNLMQQGFLFEFDRD+SRLGF+RRGC +
Sbjct: 396 RNYFIETEEQIQCLAIQSVDPKVGFSVIGNLMQQGFLFEFDRDRSRLGFSRRGCAL 451


>ref|XP_002875271.1| hypothetical protein ARALYDRAFT_484331 [Arabidopsis lyrata subsp.
           lyrata] gi|297321109|gb|EFH51530.1| hypothetical protein
           ARALYDRAFT_484331 [Arabidopsis lyrata subsp. lyrata]
          Length = 451

 Score =  231 bits (589), Expect = 1e-58
 Identities = 108/176 (61%), Positives = 136/176 (77%), Gaps = 2/176 (1%)
 Frame = +2

Query: 20  KMSFTPLQTNPISPTFYYIGIKSVLINGVNLRIDPSVWVFSQDGSGGTVIDSGTTLSFLA 199
           K+ FTPL TNP+SPTFYY+ +KSV +NG  LRIDPS+W     G+GGTV+DSGTTL+FLA
Sbjct: 275 KLFFTPLLTNPLSPTFYYVKLKSVFVNGAKLRIDPSIWEIDDSGNGGTVMDSGTTLAFLA 334

Query: 200 EPAYLQILTAFKKRVKYPIVDDPSLSFELCVNVSDLVNPS--LPRLSFKLVGNSVFSPPP 373
           +PAY  ++ A K+R+K P  D+ +  F+LCVNVS +  P   LPRL F+  G +VF PPP
Sbjct: 335 DPAYRLVIAAVKQRIKLPNADELTPGFDLCVNVSGVTKPEKILPRLKFEFSGGAVFVPPP 394

Query: 374 ANYFIDVADGIKCLALQSVSSESGFSVIGNLMQQGFLFEFDRDKSRLGFTRRGCGI 541
            NYFI+  + I+CLA+QSV  + GFSVIGNLMQQGFLFEFDRD+SRLGF+RRGC +
Sbjct: 395 RNYFIETEEQIQCLAIQSVDPKVGFSVIGNLMQQGFLFEFDRDRSRLGFSRRGCAL 450


>ref|XP_002311432.1| predicted protein [Populus trichocarpa] gi|222851252|gb|EEE88799.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score =  231 bits (589), Expect = 1e-58
 Identities = 116/183 (63%), Positives = 139/183 (75%), Gaps = 5/183 (2%)
 Frame = +2

Query: 11  SKPKMSFTPLQTNPISPTFYYIGIKSVLINGVNLRIDPSVWVFSQDGSGGTVIDSGTTLS 190
           +K  MSFTPL  NP +PTFYYI IK V ++GV L IDPSVW   + G+GGTVIDSGTTL+
Sbjct: 276 NKSMMSFTPLLINPEAPTFYYISIKGVFVDGVKLHIDPSVWSLDELGNGGTVIDSGTTLT 335

Query: 191 FLAEPAYLQILTAFKKRVKYPIVDDPSLS----FELCVNVSDLVNPSLPRLSFKLVGNSV 358
           FL EPAY +IL+AFK+ VK P       S    F+LCVNV+ +  P  PRLS +L G S+
Sbjct: 336 FLTEPAYREILSAFKREVKLPSPTPGGASTRSGFDLCVNVTGVSRPRFPRLSLELGGESL 395

Query: 359 FSPPPANYFIDVADGIKCLALQSVSSESG-FSVIGNLMQQGFLFEFDRDKSRLGFTRRGC 535
           +SPPP NYFID+++GIKCLA+Q V +ESG FSVIGNLMQQGFL EFDR KSRLGF+RRGC
Sbjct: 396 YSPPPRNYFIDISEGIKCLAIQPVEAESGRFSVIGNLMQQGFLLEFDRGKSRLGFSRRGC 455

Query: 536 GIS 544
            +S
Sbjct: 456 AVS 458


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