BLASTX nr result

ID: Coptis21_contig00024652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024652
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ53108.1| aromatic prenyltransferase, partial [Epimedium ac...    67   2e-09
gb|ADG26672.1| homogentisate geranylgeranyl transferase, partial...    59   4e-07
ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
gb|ADG26669.1| homogentisate geranylgeranyl transferase [Foenicu...    57   1e-06
gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelic...    57   1e-06

>gb|AEZ53108.1| aromatic prenyltransferase, partial [Epimedium acuminatum]
          Length = 239

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/66 (53%), Positives = 43/66 (65%)
 Frame = +2

Query: 2   ATLIAVIKDIPDVEGDKAFGFQSPSIVFGKERVFWSSVYILMXXXXXXXXXXXXXXLLPN 181
           +T+IAVIKDIPDV+GD+AFG QS +I  GKE+VFW  V  L+              L+ N
Sbjct: 120 STVIAVIKDIPDVDGDEAFGLQSLTIRLGKEKVFWLGVSTLLMAYGTAVIVGASSTLMSN 179

Query: 182 KIITVL 199
           KIITVL
Sbjct: 180 KIITVL 185


>gb|ADG26672.1| homogentisate geranylgeranyl transferase, partial [Pimpinella
           anisum]
          Length = 168

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/64 (43%), Positives = 40/64 (62%)
 Frame = +2

Query: 5   TLIAVIKDIPDVEGDKAFGFQSPSIVFGKERVFWSSVYILMXXXXXXXXXXXXXXLLPNK 184
           T+IA+ KDIPDV+GD+ FG Q+ S+  GK+RVFW  + IL+              LL +K
Sbjct: 81  TVIALFKDIPDVDGDRDFGIQTMSVTLGKKRVFWLCISILLFAYGSAVVIGSSSSLLLSK 140

Query: 185 IITV 196
           ++TV
Sbjct: 141 LVTV 144


>ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|222866332|gb|EEF03463.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/66 (42%), Positives = 40/66 (60%)
 Frame = +2

Query: 2   ATLIAVIKDIPDVEGDKAFGFQSPSIVFGKERVFWSSVYILMXXXXXXXXXXXXXXLLPN 181
           + +IA+ KDIPDV+GD+ +G QS S+  G+ERVFW  V +L+               LP+
Sbjct: 186 SAVIALFKDIPDVDGDRDYGIQSFSVSLGQERVFWLCVNMLLIAYGAAVVVGASSTFLPS 245

Query: 182 KIITVL 199
           K IT+L
Sbjct: 246 KFITIL 251


>gb|ADG26669.1| homogentisate geranylgeranyl transferase [Foeniculum vulgare]
          Length = 186

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/64 (42%), Positives = 40/64 (62%)
 Frame = +2

Query: 5   TLIAVIKDIPDVEGDKAFGFQSPSIVFGKERVFWSSVYILMXXXXXXXXXXXXXXLLPNK 184
           T+IA+ KDIPDV+GD+ FG Q+ ++  GK+RVFW  + IL+              LL +K
Sbjct: 97  TVIALFKDIPDVDGDRDFGIQTITVTLGKKRVFWLCITILLIAYGSAVVIGSSSSLLLSK 156

Query: 185 IITV 196
           ++TV
Sbjct: 157 LVTV 160


>gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelica gigas]
          Length = 317

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/64 (42%), Positives = 40/64 (62%)
 Frame = +2

Query: 5   TLIAVIKDIPDVEGDKAFGFQSPSIVFGKERVFWSSVYILMXXXXXXXXXXXXXXLLPNK 184
           T+IA+ KDIPDV+GD+ FG Q+ ++  GK+RVFW  + IL+              LL +K
Sbjct: 207 TVIALFKDIPDVDGDRDFGIQTITVTLGKKRVFWLCITILLIAYGSAVVIGSSSSLLLSK 266

Query: 185 IITV 196
           ++TV
Sbjct: 267 LVTV 270


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