BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024650
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17741.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_003538223.1| PREDICTED: crossover junction endonuclease M...   133   1e-29
ref|XP_003598875.1| Crossover junction endonuclease MUS81 [Medic...   133   1e-29
ref|XP_002268085.2| PREDICTED: crossover junction endonuclease M...   132   2e-29
ref|XP_004166267.1| PREDICTED: LOW QUALITY PROTEIN: crossover ju...   125   4e-27

>emb|CBI17741.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score =  139 bits (350), Expect = 2e-31
 Identities = 74/117 (63%), Positives = 86/117 (73%)
 Frame = +2

Query: 50  QCSFTVRACXXXXXXXXXXLAHDATHADTNVLMVPPLRLGERFGDVYEVILILDDREQFV 229
           Q SFT+RAC          L  D    + NVL +PPL +GERF DVYEV+LILDDREQF 
Sbjct: 370 QSSFTLRACSSSDYPVQK-LNSDGLKVNMNVLTMPPLLVGERFEDVYEVVLILDDREQF- 427

Query: 230 NSNKGHRSRKLIENIRIEFKIQLEVRRLPVGDAIWIARHRELGSEYVLDFIVERKGV 400
            + +G RSRK+IENI  +FKIQ+EVRRLPVGD IW+ARH+ L SEYVLDFIVERK V
Sbjct: 428 -TTQGSRSRKIIENICTQFKIQIEVRRLPVGDGIWVARHKHLDSEYVLDFIVERKNV 483


>ref|XP_003538223.1| PREDICTED: crossover junction endonuclease MUS81-like [Glycine max]
          Length = 643

 Score =  133 bits (335), Expect = 1e-29
 Identities = 71/112 (63%), Positives = 82/112 (73%)
 Frame = +2

Query: 59  FTVRACXXXXXXXXXXLAHDATHADTNVLMVPPLRLGERFGDVYEVILILDDREQFVNSN 238
           FT+RAC             D   +  N+L VPPL LGERF D Y+V+LILDDREQF  + 
Sbjct: 344 FTLRACSSADRPMQNP-NKDELVSKLNILNVPPLSLGERFEDAYDVVLILDDREQF--AT 400

Query: 239 KGHRSRKLIENIRIEFKIQLEVRRLPVGDAIWIARHRELGSEYVLDFIVERK 394
           +G RSRK+IENIR +FKIQ+EVRRLPVGD IWIARH+ L SEYVLDFIVERK
Sbjct: 401 QGSRSRKIIENIRSQFKIQIEVRRLPVGDGIWIARHKTLNSEYVLDFIVERK 452


>ref|XP_003598875.1| Crossover junction endonuclease MUS81 [Medicago truncatula]
           gi|355487923|gb|AES69126.1| Crossover junction
           endonuclease MUS81 [Medicago truncatula]
          Length = 735

 Score =  133 bits (335), Expect = 1e-29
 Identities = 72/114 (63%), Positives = 81/114 (71%)
 Frame = +2

Query: 59  FTVRACXXXXXXXXXXLAHDATHADTNVLMVPPLRLGERFGDVYEVILILDDREQFVNSN 238
           F++RAC             D   +  N+L VPPL  GERF D YEVILILDDREQF  + 
Sbjct: 416 FSMRACSSAGNTIQKP-NKDEIKSKMNILSVPPLSFGERFEDAYEVILILDDREQF--AT 472

Query: 239 KGHRSRKLIENIRIEFKIQLEVRRLPVGDAIWIARHRELGSEYVLDFIVERKGV 400
           KG RSRK+IENI   FKIQ+EVRRLPVGD IWIARH+ LGSEYVLDFIVERK +
Sbjct: 473 KGSRSRKIIENICSNFKIQIEVRRLPVGDGIWIARHKTLGSEYVLDFIVERKKI 526


>ref|XP_002268085.2| PREDICTED: crossover junction endonuclease MUS81-like [Vitis
           vinifera]
          Length = 702

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/98 (68%), Positives = 78/98 (79%)
 Frame = +2

Query: 107 LAHDATHADTNVLMVPPLRLGERFGDVYEVILILDDREQFVNSNKGHRSRKLIENIRIEF 286
           L  D    + NVL +PPL +GERF DVYEV+LILDDREQF  + +G RSRK+IENI  +F
Sbjct: 418 LNSDGLKVNMNVLTMPPLLVGERFEDVYEVVLILDDREQF--TTQGSRSRKIIENICTQF 475

Query: 287 KIQLEVRRLPVGDAIWIARHRELGSEYVLDFIVERKGV 400
           KIQ+EVRRLPVGD IW+ARH+ L SEYVLDFIVERK V
Sbjct: 476 KIQIEVRRLPVGDGIWVARHKHLDSEYVLDFIVERKNV 513


>ref|XP_004166267.1| PREDICTED: LOW QUALITY PROTEIN: crossover junction endonuclease
           MUS81-like [Cucumis sativus]
          Length = 682

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/115 (55%), Positives = 80/115 (69%)
 Frame = +2

Query: 56  SFTVRACXXXXXXXXXXLAHDATHADTNVLMVPPLRLGERFGDVYEVILILDDREQFVNS 235
           SF+ RAC             D+   +TN+L +PPL  GE+F D Y V+LILDDREQF   
Sbjct: 349 SFSSRACSSSNPSIIES-RRDSVKGNTNILSMPPLSFGEKFEDCYNVVLILDDREQFAKH 407

Query: 236 NKGHRSRKLIENIRIEFKIQLEVRRLPVGDAIWIARHRELGSEYVLDFIVERKGV 400
           +   RSR++IENI  +FKIQ+E+RRLPVGD IW+ARH+ L +EYVLDFIVERK V
Sbjct: 408 SS--RSRRMIENICSQFKIQIEIRRLPVGDGIWVARHKHLDNEYVLDFIVERKDV 460