BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024647
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32639.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002273763.1| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
ref|XP_004146551.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
ref|XP_002310252.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002521555.1| pentatricopeptide repeat-containing protein,...   130   9e-29

>emb|CBI32639.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score =  139 bits (350), Expect = 2e-31
 Identities = 71/108 (65%), Positives = 81/108 (75%), Gaps = 2/108 (1%)
 Frame = -1

Query: 320 ACSMCSDFFMGKQIHCVVIRFGFESDTQLSNALLDMYAKCGKGVTARLLFDRIRHKTVVS 141
           ACS  SD ++GKQIHCV +RFGF  DTQL N LLDMYAKCGK + AR LFDR+  K VVS
Sbjct: 207 ACSKNSDLWVGKQIHCVAMRFGFTFDTQLCNVLLDMYAKCGKILNARSLFDRMDKKDVVS 266

Query: 140 WTSIIGAYGSQGCGIEAYELFKVMESSG--VSPNSVTLLAVLSACGHS 3
           WTS+I AYG+ G G+EA +LFK ME  G  + PN VT LAVLSAC HS
Sbjct: 267 WTSMIDAYGNHGHGLEALKLFKKMEGEGNSILPNLVTFLAVLSACAHS 314



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/93 (31%), Positives = 54/93 (58%)
 Frame = -1

Query: 290 GKQIHCVVIRFGFESDTQLSNALLDMYAKCGKGVTARLLFDRIRHKTVVSWTSIIGAYGS 111
           G  +H + I+ G ++ T    AL+DMY+K G+  ++  +F+ +  K VV+W +++ ++  
Sbjct: 20  GNAVHALAIKTGSDTPTVTKTALMDMYSKYGQLGSSVRVFEEVGFKDVVTWNTMLSSFVR 79

Query: 110 QGCGIEAYELFKVMESSGVSPNSVTLLAVLSAC 12
            G   EA  +F+ M+  GV  +  TL ++L AC
Sbjct: 80  HGRPEEALAVFREMQKEGVWLSEFTLCSLLKAC 112


>ref|XP_002273763.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 498

 Score =  139 bits (350), Expect = 2e-31
 Identities = 71/108 (65%), Positives = 81/108 (75%), Gaps = 2/108 (1%)
 Frame = -1

Query: 320 ACSMCSDFFMGKQIHCVVIRFGFESDTQLSNALLDMYAKCGKGVTARLLFDRIRHKTVVS 141
           ACS  SD ++GKQIHCV +RFGF  DTQL N LLDMYAKCGK + AR LFDR+  K VVS
Sbjct: 246 ACSKNSDLWVGKQIHCVAMRFGFTFDTQLCNVLLDMYAKCGKILNARSLFDRMDKKDVVS 305

Query: 140 WTSIIGAYGSQGCGIEAYELFKVMESSG--VSPNSVTLLAVLSACGHS 3
           WTS+I AYG+ G G+EA +LFK ME  G  + PN VT LAVLSAC HS
Sbjct: 306 WTSMIDAYGNHGHGLEALKLFKKMEGEGNSILPNLVTFLAVLSACAHS 353



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/97 (32%), Positives = 57/97 (58%)
 Frame = -1

Query: 302 DFFMGKQIHCVVIRFGFESDTQLSNALLDMYAKCGKGVTARLLFDRIRHKTVVSWTSIIG 123
           D   GKQ+H + I+ G ++ T    AL+DMY+K G+  ++  +F+ +  K VV+W +++ 
Sbjct: 55  DPICGKQVHALAIKTGSDTPTVTKTALMDMYSKYGQLGSSVRVFEEVGFKDVVTWNTMLS 114

Query: 122 AYGSQGCGIEAYELFKVMESSGVSPNSVTLLAVLSAC 12
           ++   G   EA  +F+ M+  GV  +  TL ++L AC
Sbjct: 115 SFVRHGRPEEALAVFREMQKEGVWLSEFTLCSLLKAC 151


>ref|XP_004146551.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
           mitochondrial-like [Cucumis sativus]
           gi|449529896|ref|XP_004171934.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g66500,
           mitochondrial-like [Cucumis sativus]
          Length = 544

 Score =  137 bits (344), Expect = 1e-30
 Identities = 68/108 (62%), Positives = 83/108 (76%), Gaps = 2/108 (1%)
 Frame = -1

Query: 320 ACSMCSDFFMGKQIHCVVIRFGFESDTQLSNALLDMYAKCGKGVTARLLFDRIRHKTVVS 141
           ACS  SD ++GKQIHCV +R G  S+TQL N LLDMYAKCGK + AR +FD + HK VVS
Sbjct: 298 ACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVS 357

Query: 140 WTSIIGAYGSQGCGIEAYELFKVMES--SGVSPNSVTLLAVLSACGHS 3
           W+S+I  YGS G G++A+ELFK+M    +GV PNSVT L+VLSACGHS
Sbjct: 358 WSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHS 405



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/103 (32%), Positives = 56/103 (54%)
 Frame = -1

Query: 320 ACSMCSDFFMGKQIHCVVIRFGFESDTQLSNALLDMYAKCGKGVTARLLFDRIRHKTVVS 141
           ACS       G+ +H ++I+ G  S      A+LDMY+KCG    +  +F+ +  + VV+
Sbjct: 101 ACSALPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVA 160

Query: 140 WTSIIGAYGSQGCGIEAYELFKVMESSGVSPNSVTLLAVLSAC 12
           W S++ ++  +G   EA  +F+ M+   V  +  TL +VL AC
Sbjct: 161 WNSLLSSFLREGLAEEALNVFEEMKREKVEFSEFTLCSVLKAC 203


>ref|XP_002310252.1| predicted protein [Populus trichocarpa] gi|222853155|gb|EEE90702.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  135 bits (340), Expect = 3e-30
 Identities = 70/108 (64%), Positives = 83/108 (76%), Gaps = 2/108 (1%)
 Frame = -1

Query: 320 ACSMCSDFFMGKQIHCVVIRFGFESDTQLSNALLDMYAKCGKGVTARLLFDRIRHKTVVS 141
           ACS  SD ++G QIHCV +RFGF ++TQ+ N LLDMYAKCG+ + +R +FD I HKTVVS
Sbjct: 298 ACSDNSDLWIGMQIHCVALRFGFIANTQVCNVLLDMYAKCGRILKSRSIFDGICHKTVVS 357

Query: 140 WTSIIGAYGSQGCGIEAYELFKVM--ESSGVSPNSVTLLAVLSACGHS 3
           WTS+I AYG  G G EA +LFK M  E S V PNS+TLLAVLSACGHS
Sbjct: 358 WTSMIDAYGRHGHGDEALKLFKEMGQEGSRVLPNSLTLLAVLSACGHS 405



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/103 (31%), Positives = 55/103 (53%)
 Frame = -1

Query: 320 ACSMCSDFFMGKQIHCVVIRFGFESDTQLSNALLDMYAKCGKGVTARLLFDRIRHKTVVS 141
           ACS   D   G+Q+H ++I+ G +  T    A++DMY+K G    +  +F+ +  + VV+
Sbjct: 101 ACSALPDTKCGRQVHALMIKTGTDLGTITKTAVMDMYSKYGCLGESVKVFEEMEFRDVVT 160

Query: 140 WTSIIGAYGSQGCGIEAYELFKVMESSGVSPNSVTLLAVLSAC 12
           W +++ ++   G   EA  +F+ M    V     TL +VL AC
Sbjct: 161 WNALVSSFLRHGLAKEALGVFRAMRRESVEITEFTLCSVLKAC 203


>ref|XP_002521555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539233|gb|EEF40826.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 418

 Score =  130 bits (328), Expect = 9e-29
 Identities = 70/108 (64%), Positives = 77/108 (71%), Gaps = 2/108 (1%)
 Frame = -1

Query: 320 ACSMCSDFFMGKQIHCVVIRFGFESDTQLSNALLDMYAKCGKGVTARLLFDRIRHKTVVS 141
           ACS  S  + G QIHC  IRFGF SDTQL N L+DMYAKCGK + AR +FD I  K VVS
Sbjct: 285 ACSENSVLWNGVQIHCAAIRFGFTSDTQLCNKLIDMYAKCGKILNARSVFDGIFRKDVVS 344

Query: 140 WTSIIGAYGSQGCGIEAYELFKVMESSG--VSPNSVTLLAVLSACGHS 3
           WTS+I AYG  G G EA ELFK M   G  VSPNS+T LAVLSACGH+
Sbjct: 345 WTSMIDAYGRHGNGYEALELFKKMGLLGNMVSPNSITFLAVLSACGHA 392



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/103 (32%), Positives = 53/103 (51%)
 Frame = -1

Query: 320 ACSMCSDFFMGKQIHCVVIRFGFESDTQLSNALLDMYAKCGKGVTARLLFDRIRHKTVVS 141
           ACS       GKQ+H ++I+ G +       AL+DMY+K G    +   F+ +  + VV+
Sbjct: 87  ACSALPGAERGKQVHALMIKAGTDLGPIAKTALIDMYSKYGYLGDSVKAFEEVEFRDVVT 146

Query: 140 WTSIIGAYGSQGCGIEAYELFKVMESSGVSPNSVTLLAVLSAC 12
           W S++ ++   G   +A  +F  M   GV  +  TL +VL AC
Sbjct: 147 WNSLLSSFLRHGLSNKALGIFGAMRREGVEFSEFTLCSVLKAC 189