BLASTX nr result

ID: Coptis21_contig00024646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024646
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273742.2| PREDICTED: probable xyloglucan endotransgluc...   201   7e-50
ref|XP_002274858.1| PREDICTED: probable xyloglucan endotransgluc...   197   6e-49
ref|XP_002270416.1| PREDICTED: probable xyloglucan endotransgluc...   197   7e-49
ref|XP_003633213.1| PREDICTED: probable xyloglucan endotransgluc...   196   2e-48
emb|CBI17813.3| unnamed protein product [Vitis vinifera]              193   1e-47

>ref|XP_002273742.2| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23-like [Vitis vinifera]
          Length = 297

 Score =  201 bits (510), Expect = 7e-50
 Identities = 100/118 (84%), Positives = 107/118 (90%), Gaps = 3/118 (2%)
 Frame = +3

Query: 141 TSSSLVSRMFIMSTL---LVAALAGNFYQDFDITWGDGRGKMLSNGQLLTLSLDKASGSG 311
           +SSS VS   +MS +   L+AA AGNFYQDFDITWGDGRGK+L+NG+LLTLSLDK SGSG
Sbjct: 6   SSSSAVSTALLMSVVVSFLMAASAGNFYQDFDITWGDGRGKILNNGELLTLSLDKPSGSG 65

Query: 312 FQSKKEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILH 485
           FQSK EYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILH
Sbjct: 66  FQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILH 123


>ref|XP_002274858.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23 [Vitis vinifera]
          Length = 296

 Score =  197 bits (502), Expect = 6e-49
 Identities = 98/122 (80%), Positives = 107/122 (87%), Gaps = 3/122 (2%)
 Frame = +3

Query: 129 MACSTSSSLVSRMFIMSTLL---VAALAGNFYQDFDITWGDGRGKMLSNGQLLTLSLDKA 299
           MA  ++S+L  ++ +MS LL   V A  GN YQDFD+TWGDGR K+L+NGQLLTLSLDKA
Sbjct: 1   MASPSTSNLSPKLLLMSLLLGSFVVASVGNLYQDFDLTWGDGRAKILNNGQLLTLSLDKA 60

Query: 300 SGSGFQSKKEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI 479
           SGSGFQSK EYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI
Sbjct: 61  SGSGFQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI 120

Query: 480 LH 485
           LH
Sbjct: 121 LH 122


>ref|XP_002270416.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23 [Vitis vinifera]
          Length = 296

 Score =  197 bits (501), Expect = 7e-49
 Identities = 97/122 (79%), Positives = 108/122 (88%), Gaps = 3/122 (2%)
 Frame = +3

Query: 129 MACSTSSSLVSRMFIMSTLL---VAALAGNFYQDFDITWGDGRGKMLSNGQLLTLSLDKA 299
           MA +++S+L  ++ ++S LL   V A  GN YQDFD+TWGDGR K+L+NGQLLTLSLDKA
Sbjct: 1   MASTSTSNLSPKLLLLSLLLGSFVVASVGNLYQDFDLTWGDGRAKILNNGQLLTLSLDKA 60

Query: 300 SGSGFQSKKEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI 479
           SGSGFQSK EYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI
Sbjct: 61  SGSGFQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI 120

Query: 480 LH 485
           LH
Sbjct: 121 LH 122


>ref|XP_003633213.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 23-like [Vitis vinifera]
          Length = 345

 Score =  196 bits (497), Expect = 2e-48
 Identities = 97/118 (82%), Positives = 106/118 (89%), Gaps = 3/118 (2%)
 Frame = +3

Query: 141 TSSSLVSRMFIMSTL---LVAALAGNFYQDFDITWGDGRGKMLSNGQLLTLSLDKASGSG 311
           +S S+VS   ++S +   L+AA AGNFYQDFDITWGDGR K+L+NG+LLTLSLDK SGSG
Sbjct: 6   SSFSVVSTALLISVVASFLMAASAGNFYQDFDITWGDGRAKILNNGELLTLSLDKTSGSG 65

Query: 312 FQSKKEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILH 485
           FQSK EYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILH
Sbjct: 66  FQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILH 123


>emb|CBI17813.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  193 bits (491), Expect = 1e-47
 Identities = 102/160 (63%), Positives = 119/160 (74%), Gaps = 3/160 (1%)
 Frame = +3

Query: 15  FPPSDFFHFITTINSYSDAXXXXXXXXXXXXXXKPNFEMACSTSSSLVSRMFIMSTLL-- 188
           F   ++FHF +++NS+S                     MA  ++ +L  ++F++S LL  
Sbjct: 58  FHAQNYFHF-SSLNSHS---------------------MASPSTWNLSPKLFLVSLLLGS 95

Query: 189 -VAALAGNFYQDFDITWGDGRGKMLSNGQLLTLSLDKASGSGFQSKKEYLFGKIDMQLKL 365
            V A  GN YQDF+ITWGDGR K+L+NG+LLTLSLDK SGSGFQSK EYLFGKIDMQLKL
Sbjct: 96  FVVASVGNLYQDFEITWGDGRAKILNNGELLTLSLDKTSGSGFQSKNEYLFGKIDMQLKL 155

Query: 366 VPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILH 485
           VPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILH
Sbjct: 156 VPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILH 195


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