BLASTX nr result

ID: Coptis21_contig00024635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024635
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275760.2| PREDICTED: G-type lectin S-receptor-like ser...   101   1e-19
ref|XP_002275592.1| PREDICTED: G-type lectin S-receptor-like ser...   101   1e-19
emb|CAN72121.1| hypothetical protein VITISV_031648 [Vitis vinifera]   101   1e-19
emb|CBI37577.3| unnamed protein product [Vitis vinifera]              100   3e-19
ref|XP_002264274.2| PREDICTED: G-type lectin S-receptor-like ser...   100   4e-19

>ref|XP_002275760.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase RLK1-like [Vitis vinifera]
          Length = 768

 Score =  101 bits (251), Expect = 1e-19
 Identities = 62/169 (36%), Positives = 91/169 (53%), Gaps = 15/169 (8%)
 Frame = -3

Query: 614 ALLHDNGNFVVYNLHSLVIWQSFDYPTDTILSGQTLKTGQKLVSSCT----------LVM 465
           A + ++GNFV+YN    ++WQSFD PTDT+L GQ L  G++L+SS +          L M
Sbjct: 118 ASMLNSGNFVLYNSDGDIVWQSFDLPTDTLLPGQRLSAGKELLSSMSETNPSTGLFRLKM 177

Query: 464 QEDGDLVLY----DESNNYQWKSQTRKIASSPIVLNLDSTGYLYLA-DWDGVVIKNLTNG 300
           Q DG+LV Y     ++  Y + +         + LNLD  G+LYL  + +G  IKN+T+G
Sbjct: 178 QNDGNLVQYPVEAPDTATYAYYASGTDGKGDNVTLNLDDEGHLYLLNNTNGSNIKNITDG 237

Query: 299 VADSCRSSAGHIIYRATLDPDNTFRLYEEKIGCEGGKSVVLWHSDCTRC 153
             +         +YR  +DPD  F+LY   +G  G  S +LW S   +C
Sbjct: 238 YNN-------ENLYRLRIDPDGIFKLYSHDLGQNGSWS-ILWRSSADKC 278


>ref|XP_002275592.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase RLK1-like [Vitis vinifera]
          Length = 772

 Score =  101 bits (251), Expect = 1e-19
 Identities = 68/171 (39%), Positives = 88/171 (51%), Gaps = 15/171 (8%)
 Frame = -3

Query: 620 SYALLHDNGNFVVYNLHSLVIWQSFDYPTDTILSGQTLKTGQKLVSSCT----------L 471
           S A + D+GNFV+YN    +IWQSFD+PTDT+LSGQ L+ G +LVSS +          L
Sbjct: 116 SSASMLDSGNFVLYNSKQEIIWQSFDHPTDTLLSGQRLQAGAELVSSVSEKNYSTGMFQL 175

Query: 470 VMQEDGDLVLYDES-----NNYQWKSQTRKIASSPIVLNLDSTGYLYLADWDGVVIKNLT 306
            MQ DG+LV Y  +         W S T     +   LNLD+ GYLYL +  G  IKNLT
Sbjct: 176 KMQHDGNLVQYPTNVPEVVEYAYWASDTHGEGDN-ATLNLDADGYLYLLNATGFNIKNLT 234

Query: 305 NGVADSCRSSAGHIIYRATLDPDNTFRLYEEKIGCEGGKSVVLWHSDCTRC 153
           +G            IY   +D D  FRLY   +  +  +  V W S   +C
Sbjct: 235 DG-----GGPQEETIYLMKIDVDGIFRLYSRGLD-QSSEWSVEWSSSIDKC 279


>emb|CAN72121.1| hypothetical protein VITISV_031648 [Vitis vinifera]
          Length = 760

 Score =  101 bits (251), Expect = 1e-19
 Identities = 68/171 (39%), Positives = 88/171 (51%), Gaps = 15/171 (8%)
 Frame = -3

Query: 620 SYALLHDNGNFVVYNLHSLVIWQSFDYPTDTILSGQTLKTGQKLVSSCT----------L 471
           S A + D+GNFV+YN    +IWQSFD+PTDT+LSGQ L+ G +LVSS +          L
Sbjct: 116 SSASMLDSGNFVLYNSKQEIIWQSFDHPTDTLLSGQRLQAGAELVSSVSEKNYSTGMFQL 175

Query: 470 VMQEDGDLVLYDES-----NNYQWKSQTRKIASSPIVLNLDSTGYLYLADWDGVVIKNLT 306
            MQ DG+LV Y  +         W S T     +   LNLD+ GYLYL +  G  IKNLT
Sbjct: 176 KMQHDGNLVQYPTNVPEVVEYAYWASDTHGEGDN-ATLNLDADGYLYLLNATGFNIKNLT 234

Query: 305 NGVADSCRSSAGHIIYRATLDPDNTFRLYEEKIGCEGGKSVVLWHSDCTRC 153
           +G            IY   +D D  FRLY   +  +  +  V W S   +C
Sbjct: 235 DG-----GGPQEETIYLMKIDVDGIFRLYSRGLD-QSSEWSVEWSSSIDKC 279


>emb|CBI37577.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  100 bits (248), Expect = 3e-19
 Identities = 66/165 (40%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
 Frame = -3

Query: 602 DNGNFVVYNLHSLVIWQSFDYPTDTILSGQTLKTGQKLVSSCT----------LVMQEDG 453
           D+GNFV+YN    +IWQSFD+PTDT+LSGQ L+ G +LVSS +          L MQ DG
Sbjct: 3   DSGNFVLYNSKQEIIWQSFDHPTDTLLSGQRLQAGAELVSSVSEKNYSTGMFQLKMQHDG 62

Query: 452 DLVLYDES-----NNYQWKSQTRKIASSPIVLNLDSTGYLYLADWDGVVIKNLTNGVADS 288
           +LV Y  +         W S T     +   LNLD+ GYLYL +  G  IKNLT+G    
Sbjct: 63  NLVQYPTNVPEVVEYAYWASDTHGEGDN-ATLNLDADGYLYLLNATGFNIKNLTDG---- 117

Query: 287 CRSSAGHIIYRATLDPDNTFRLYEEKIGCEGGKSVVLWHSDCTRC 153
                   IY   +D D  FRLY   +  +  +  V W S   +C
Sbjct: 118 -GGPQEETIYLMKIDVDGIFRLYSRGLD-QSSEWSVEWSSSIDKC 160


>ref|XP_002264274.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase RLK1-like [Vitis vinifera]
          Length = 815

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 71/170 (41%), Positives = 84/170 (49%), Gaps = 14/170 (8%)
 Frame = -3

Query: 620 SYALLHDNGNFVVYNLHSLVIWQSFDYPTDTILSGQTLKTGQKLVSSCT----------L 471
           S A + D+GNFV+ N  S VIWQSFD PTDTIL GQ L  GQKLVSS +          L
Sbjct: 175 SSASMLDDGNFVLKNSSSSVIWQSFDTPTDTILPGQPLLAGQKLVSSVSETNHSAGKFQL 234

Query: 470 VMQEDGDLVLYD----ESNNYQWKSQTRKIASSPIVLNLDSTGYLYLADWDGVVIKNLTN 303
           +MQ DG+LV Y     +     W + T   A + + LNLD  G LYL +  G  I NL  
Sbjct: 235 IMQSDGNLVQYPIDVAKPETAYWNTST-FTAGATVSLNLDVNGKLYLRNGTGFNIMNLYE 293

Query: 302 GVADSCRSSAGHIIYRATLDPDNTFRLYEEKIGCEGGKSVVLWHSDCTRC 153
           G      S     IYR T+D D   RLY      + G   V W     RC
Sbjct: 294 G------SPFSTGIYRLTIDADGILRLYSSS-SDQNGDWTVEWSPTTNRC 336


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