BLASTX nr result

ID: Coptis21_contig00024630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024630
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302055.1| predicted protein [Populus trichocarpa] gi|2...   153   3e-35
ref|XP_002306836.1| predicted protein [Populus trichocarpa] gi|2...   148   7e-34
ref|XP_002532376.1| Desacetoxyvindoline 4-hydroxylase, putative ...   145   4e-33
ref|XP_002263628.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   143   2e-32
emb|CBI37091.3| unnamed protein product [Vitis vinifera]              143   2e-32

>ref|XP_002302055.1| predicted protein [Populus trichocarpa] gi|222843781|gb|EEE81328.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score =  153 bits (386), Expect = 3e-35
 Identities = 72/122 (59%), Positives = 94/122 (77%), Gaps = 2/122 (1%)
 Frame = -2

Query: 364 YDRAKEIKEFDETKAGVKGLVDSGVTRIPKIFIHSSEKL--PKESDSNGEYLQIPVINLE 191
           YD+AKE++ F ETKAGVKGLVDSGVT+IP+ F+H  E +  P    S+   LQIPV++ E
Sbjct: 20  YDKAKEVRAFSETKAGVKGLVDSGVTKIPRFFVHPPEYVQNPSSETSSDIGLQIPVVDFE 79

Query: 190 GVHGDRRKVVVEDIKRASETWGFFQMISHGIPVSVLDEMIEGVRRFHEQPTDEKKKIYGR 11
           G  G RR+ VV++ ++A ETWGFFQM++HGIPVSVLDEM+ GV+RFHEQP D+K + Y  
Sbjct: 80  GFGGCRRQEVVDEARKALETWGFFQMVNHGIPVSVLDEMLAGVKRFHEQPQDKKMEFYTH 139

Query: 10  EY 5
           +Y
Sbjct: 140 DY 141


>ref|XP_002306836.1| predicted protein [Populus trichocarpa] gi|222856285|gb|EEE93832.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  148 bits (374), Expect = 7e-34
 Identities = 74/129 (57%), Positives = 92/129 (71%), Gaps = 1/129 (0%)
 Frame = -2

Query: 391 ECILRKVLDYDRAKEIKEFDETKAGVKGLVDSGVTRIPKIFIHSSEKLPKES-DSNGEYL 215
           +  L+    YD+ K +K FDETKAGVKGLVDSGVT+IP+ FIH  E + K S DS    L
Sbjct: 10  DSFLQDESSYDKGKAVKAFDETKAGVKGLVDSGVTKIPRFFIHPPEDVEKSSSDSIHLGL 69

Query: 214 QIPVINLEGVHGDRRKVVVEDIKRASETWGFFQMISHGIPVSVLDEMIEGVRRFHEQPTD 35
           Q+PVIN E     RR  VV +I++ASE WGFFQM++HGIPVS+LD+M+ GVRRFHEQ  D
Sbjct: 70  QVPVINFEHFESCRRSEVVNEIRKASEIWGFFQMVNHGIPVSILDDMLAGVRRFHEQHRD 129

Query: 34  EKKKIYGRE 8
            K + Y R+
Sbjct: 130 VKMEFYSRD 138


>ref|XP_002532376.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis]
           gi|223527932|gb|EEF30019.1| Desacetoxyvindoline
           4-hydroxylase, putative [Ricinus communis]
          Length = 372

 Score =  145 bits (367), Expect = 4e-33
 Identities = 70/122 (57%), Positives = 94/122 (77%), Gaps = 3/122 (2%)
 Frame = -2

Query: 364 YDRAKEIKEFDETKAGVKGLVDSGVTRIPKIFIHSSE--KLPKESDSNGEYLQIPVINLE 191
           YD+A+E+K FDETKAGVKGLVDS VT+IP+ F+H  +  K P    ++   LQ+PVI+L 
Sbjct: 21  YDKAEEVKAFDETKAGVKGLVDSDVTKIPRFFVHPPQNVKNPSSKITDVSLLQVPVIDLG 80

Query: 190 GVHGDRRKV-VVEDIKRASETWGFFQMISHGIPVSVLDEMIEGVRRFHEQPTDEKKKIYG 14
           G+   RR++ VV +I+ ASETWGFFQM++HG+PVSVLDEM+ GV+RFHEQP + K + Y 
Sbjct: 81  GIGSHRRRLQVVNEIRNASETWGFFQMVNHGVPVSVLDEMLAGVKRFHEQPQEVKMEWYS 140

Query: 13  RE 8
           R+
Sbjct: 141 RD 142


>ref|XP_002263628.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Vitis vinifera]
          Length = 409

 Score =  143 bits (361), Expect = 2e-32
 Identities = 66/129 (51%), Positives = 96/129 (74%), Gaps = 1/129 (0%)
 Frame = -2

Query: 391 ECILRKVLDYDRAKEIKEFDETKAGVKGLVDSGVTRIPKIFIHSSEKLPKE-SDSNGEYL 215
           E ++     ++RA E+K+FDETKAGVKGLVDSGV +IP+ FIH  E L +  S++ G   
Sbjct: 15  ESLIENGAYFNRAIEVKKFDETKAGVKGLVDSGVEKIPRFFIHPPENLQRSLSETGGTSF 74

Query: 214 QIPVINLEGVHGDRRKVVVEDIKRASETWGFFQMISHGIPVSVLDEMIEGVRRFHEQPTD 35
           Q+PVI+  G+   +R  +V  I++ASETWGFFQM++HGIP+++++E++EGVRRFHEQP +
Sbjct: 75  QVPVIDFRGLDMGQRAEIVRAIRKASETWGFFQMVNHGIPITIIEEVLEGVRRFHEQPQE 134

Query: 34  EKKKIYGRE 8
            K + Y R+
Sbjct: 135 MKMEWYSRD 143


>emb|CBI37091.3| unnamed protein product [Vitis vinifera]
          Length = 368

 Score =  143 bits (361), Expect = 2e-32
 Identities = 66/129 (51%), Positives = 96/129 (74%), Gaps = 1/129 (0%)
 Frame = -2

Query: 391 ECILRKVLDYDRAKEIKEFDETKAGVKGLVDSGVTRIPKIFIHSSEKLPKE-SDSNGEYL 215
           E ++     ++RA E+K+FDETKAGVKGLVDSGV +IP+ FIH  E L +  S++ G   
Sbjct: 6   ESLIENGAYFNRAIEVKKFDETKAGVKGLVDSGVEKIPRFFIHPPENLQRSLSETGGTSF 65

Query: 214 QIPVINLEGVHGDRRKVVVEDIKRASETWGFFQMISHGIPVSVLDEMIEGVRRFHEQPTD 35
           Q+PVI+  G+   +R  +V  I++ASETWGFFQM++HGIP+++++E++EGVRRFHEQP +
Sbjct: 66  QVPVIDFRGLDMGQRAEIVRAIRKASETWGFFQMVNHGIPITIIEEVLEGVRRFHEQPQE 125

Query: 34  EKKKIYGRE 8
            K + Y R+
Sbjct: 126 MKMEWYSRD 134


Top