BLASTX nr result

ID: Coptis21_contig00024626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024626
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_180393.1| cyclic nucleotide-gated channel 15 [Arabidopsis...   233   2e-59
ref|XP_002880939.1| ATCNGC15 [Arabidopsis lyrata subsp. lyrata] ...   233   2e-59
ref|XP_004145808.1| PREDICTED: putative cyclic nucleotide-gated ...   231   5e-59
emb|CBI16330.3| unnamed protein product [Vitis vinifera]              231   6e-59
ref|XP_002282455.1| PREDICTED: putative cyclic nucleotide-gated ...   231   6e-59

>ref|NP_180393.1| cyclic nucleotide-gated channel 15 [Arabidopsis thaliana]
           gi|38503241|sp|Q9SL29.1|CNG15_ARATH RecName:
           Full=Putative cyclic nucleotide-gated ion channel 15;
           AltName: Full=Cyclic nucleotide- and
           calmodulin-regulated ion channel 15
           gi|4803955|gb|AAD29827.1| putative cyclic nucleotide and
           calmodulin-regulated ion channel protein [Arabidopsis
           thaliana] gi|330253003|gb|AEC08097.1| cyclic
           nucleotide-gated channel 15 [Arabidopsis thaliana]
          Length = 678

 Score =  233 bits (593), Expect = 2e-59
 Identities = 116/146 (79%), Positives = 123/146 (84%)
 Frame = -2

Query: 442 NLSTSTFVGEISFAIIIAIVGLVIFALLIGNMQTYLQSTTARLEEWRIRRTDTEQWMRHR 263
           NL+TST+ GEI FAIIIA +GLV+FALLIGNMQTYLQSTT RLEEWRIRRTDTEQWM HR
Sbjct: 357 NLATSTYAGEILFAIIIATLGLVLFALLIGNMQTYLQSTTMRLEEWRIRRTDTEQWMHHR 416

Query: 262 QLPMELRQCVRRYDQYKWVATRGVDEEAXXXXXXXXXXXXXXRHLCLDLVRRVPLFDQMD 83
           QLP ELRQ VR+YDQYKW+ATRGVDEEA              RHLC DLVRRVPLFDQMD
Sbjct: 417 QLPPELRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDLVRRVPLFDQMD 476

Query: 82  ERMLDAICERLKPALCTQGTCLVREG 5
           ERMLDAICERLKPALCT+GT LVREG
Sbjct: 477 ERMLDAICERLKPALCTEGTFLVREG 502


>ref|XP_002880939.1| ATCNGC15 [Arabidopsis lyrata subsp. lyrata]
           gi|297326778|gb|EFH57198.1| ATCNGC15 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 678

 Score =  233 bits (593), Expect = 2e-59
 Identities = 116/146 (79%), Positives = 123/146 (84%)
 Frame = -2

Query: 442 NLSTSTFVGEISFAIIIAIVGLVIFALLIGNMQTYLQSTTARLEEWRIRRTDTEQWMRHR 263
           NL+TST+ GEI FAIIIA +GLV+FALLIGNMQTYLQSTT RLEEWRIRRTDTEQWM HR
Sbjct: 357 NLATSTYAGEILFAIIIATLGLVLFALLIGNMQTYLQSTTMRLEEWRIRRTDTEQWMHHR 416

Query: 262 QLPMELRQCVRRYDQYKWVATRGVDEEAXXXXXXXXXXXXXXRHLCLDLVRRVPLFDQMD 83
           QLP ELRQ VR+YDQYKW+ATRGVDEEA              RHLC DLVRRVPLFDQMD
Sbjct: 417 QLPPELRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDLVRRVPLFDQMD 476

Query: 82  ERMLDAICERLKPALCTQGTCLVREG 5
           ERMLDAICERLKPALCT+GT LVREG
Sbjct: 477 ERMLDAICERLKPALCTEGTFLVREG 502


>ref|XP_004145808.1| PREDICTED: putative cyclic nucleotide-gated ion channel 15-like
           [Cucumis sativus] gi|449516804|ref|XP_004165436.1|
           PREDICTED: putative cyclic nucleotide-gated ion channel
           15-like [Cucumis sativus]
          Length = 720

 Score =  231 bits (589), Expect = 5e-59
 Identities = 117/146 (80%), Positives = 122/146 (83%)
 Frame = -2

Query: 442 NLSTSTFVGEISFAIIIAIVGLVIFALLIGNMQTYLQSTTARLEEWRIRRTDTEQWMRHR 263
           NL+TSTFVGEI FAII+A +GLV+FALLIGNMQ YLQSTT RLEEWRIRRTDTEQWM HR
Sbjct: 386 NLATSTFVGEIIFAIIVATLGLVLFALLIGNMQKYLQSTTVRLEEWRIRRTDTEQWMHHR 445

Query: 262 QLPMELRQCVRRYDQYKWVATRGVDEEAXXXXXXXXXXXXXXRHLCLDLVRRVPLFDQMD 83
           QLP ELRQ VRRYDQYKWVATRGVDEE               RHLCLDLVRRVPLFDQMD
Sbjct: 446 QLPPELRQSVRRYDQYKWVATRGVDEEVLLRSLPLDLRRDIKRHLCLDLVRRVPLFDQMD 505

Query: 82  ERMLDAICERLKPALCTQGTCLVREG 5
           ERMLDAICERLKPAL T+GT LVREG
Sbjct: 506 ERMLDAICERLKPALSTEGTFLVREG 531


>emb|CBI16330.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  231 bits (588), Expect = 6e-59
 Identities = 116/146 (79%), Positives = 123/146 (84%)
 Frame = -2

Query: 442 NLSTSTFVGEISFAIIIAIVGLVIFALLIGNMQTYLQSTTARLEEWRIRRTDTEQWMRHR 263
           NLSTST+VGEI FAIIIA +GLV+FALLIGNMQTYLQSTT RLEEWRI+RTDTEQWM HR
Sbjct: 369 NLSTSTYVGEIIFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHR 428

Query: 262 QLPMELRQCVRRYDQYKWVATRGVDEEAXXXXXXXXXXXXXXRHLCLDLVRRVPLFDQMD 83
           QLP EL+Q VR+YDQYKWVATRGVDEEA              RHLC DLVRRVPLFDQMD
Sbjct: 429 QLPAELKQSVRKYDQYKWVATRGVDEEALLKGLPMDLRRDIKRHLCFDLVRRVPLFDQMD 488

Query: 82  ERMLDAICERLKPALCTQGTCLVREG 5
           ERMLDAICERLKPAL T+GT LVREG
Sbjct: 489 ERMLDAICERLKPALSTEGTFLVREG 514


>ref|XP_002282455.1| PREDICTED: putative cyclic nucleotide-gated ion channel 15-like
           [Vitis vinifera]
          Length = 713

 Score =  231 bits (588), Expect = 6e-59
 Identities = 116/146 (79%), Positives = 123/146 (84%)
 Frame = -2

Query: 442 NLSTSTFVGEISFAIIIAIVGLVIFALLIGNMQTYLQSTTARLEEWRIRRTDTEQWMRHR 263
           NLSTST+VGEI FAIIIA +GLV+FALLIGNMQTYLQSTT RLEEWRI+RTDTEQWM HR
Sbjct: 369 NLSTSTYVGEIIFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHR 428

Query: 262 QLPMELRQCVRRYDQYKWVATRGVDEEAXXXXXXXXXXXXXXRHLCLDLVRRVPLFDQMD 83
           QLP EL+Q VR+YDQYKWVATRGVDEEA              RHLC DLVRRVPLFDQMD
Sbjct: 429 QLPAELKQSVRKYDQYKWVATRGVDEEALLKGLPMDLRRDIKRHLCFDLVRRVPLFDQMD 488

Query: 82  ERMLDAICERLKPALCTQGTCLVREG 5
           ERMLDAICERLKPAL T+GT LVREG
Sbjct: 489 ERMLDAICERLKPALSTEGTFLVREG 514


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