BLASTX nr result

ID: Coptis21_contig00024623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024623
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|2...   122   7e-26
ref|XP_002316897.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ric...   115   5e-24
ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc...   112   6e-23
ref|XP_003596751.1| SPA1-like protein [Medicago truncatula] gi|3...   112   6e-23

>ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|222869800|gb|EEF06931.1|
           predicted protein [Populus trichocarpa]
          Length = 857

 Score =  122 bits (305), Expect = 7e-26
 Identities = 56/62 (90%), Positives = 61/62 (98%)
 Frame = -3

Query: 635 VFVYHKAFPMPVLSFKFSNTDPLSGHELEDALQFISSVCWRGQSSTLIAANSTGNIKVLE 456
           VFVYHKAFPMPVLSFKF+NTDPLSGHE++DA QFISSVCWRGQSSTL+AANSTGNIK+LE
Sbjct: 796 VFVYHKAFPMPVLSFKFNNTDPLSGHEMDDAAQFISSVCWRGQSSTLVAANSTGNIKILE 855

Query: 455 MV 450
           MV
Sbjct: 856 MV 857


>ref|XP_002316897.1| predicted protein [Populus trichocarpa] gi|222859962|gb|EEE97509.1|
           predicted protein [Populus trichocarpa]
          Length = 851

 Score =  120 bits (301), Expect = 2e-25
 Identities = 55/62 (88%), Positives = 60/62 (96%)
 Frame = -3

Query: 635 VFVYHKAFPMPVLSFKFSNTDPLSGHELEDALQFISSVCWRGQSSTLIAANSTGNIKVLE 456
           VFVYHKAFPMPVLSFKF+NTDPLSGHE++D  QFISSVCWRGQSSTL+AANSTGNIK+LE
Sbjct: 790 VFVYHKAFPMPVLSFKFNNTDPLSGHEMDDTAQFISSVCWRGQSSTLVAANSTGNIKILE 849

Query: 455 MV 450
           MV
Sbjct: 850 MV 851


>ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
            gi|223526576|gb|EEF28831.1| ubiquitin ligase protein
            cop1, putative [Ricinus communis]
          Length = 889

 Score =  115 bits (289), Expect = 5e-24
 Identities = 52/62 (83%), Positives = 58/62 (93%)
 Frame = -3

Query: 635  VFVYHKAFPMPVLSFKFSNTDPLSGHELEDALQFISSVCWRGQSSTLIAANSTGNIKVLE 456
            VF+YHKAFPMP LSFKF+NTDPLSGHE++D  QFISSVCWR QSSTL+AANSTGNIK+LE
Sbjct: 828  VFIYHKAFPMPALSFKFNNTDPLSGHEMDDPAQFISSVCWRSQSSTLVAANSTGNIKILE 887

Query: 455  MV 450
            MV
Sbjct: 888  MV 889


>ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max]
          Length = 892

 Score =  112 bits (280), Expect = 6e-23
 Identities = 50/62 (80%), Positives = 58/62 (93%)
 Frame = -3

Query: 635  VFVYHKAFPMPVLSFKFSNTDPLSGHELEDALQFISSVCWRGQSSTLIAANSTGNIKVLE 456
            VF+YHKAF MP LSFKF NTDPLSG+E++DA QF+SSVCWRGQSSTL+AANSTGN+K+LE
Sbjct: 831  VFIYHKAFSMPALSFKFQNTDPLSGNEVDDAAQFVSSVCWRGQSSTLLAANSTGNVKILE 890

Query: 455  MV 450
            MV
Sbjct: 891  MV 892


>ref|XP_003596751.1| SPA1-like protein [Medicago truncatula] gi|355485799|gb|AES67002.1|
           SPA1-like protein [Medicago truncatula]
          Length = 875

 Score =  112 bits (280), Expect = 6e-23
 Identities = 50/62 (80%), Positives = 57/62 (91%)
 Frame = -3

Query: 635 VFVYHKAFPMPVLSFKFSNTDPLSGHELEDALQFISSVCWRGQSSTLIAANSTGNIKVLE 456
           VFVYHKAFPMP L FKF NTDP+SG+E++DA QF+SSVCWRGQS TLIAANSTGN+K+LE
Sbjct: 814 VFVYHKAFPMPALQFKFQNTDPISGNEVDDAAQFVSSVCWRGQSPTLIAANSTGNVKILE 873

Query: 455 MV 450
           MV
Sbjct: 874 MV 875


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