BLASTX nr result
ID: Coptis21_contig00024623
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024623 (637 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|2... 122 7e-26 ref|XP_002316897.1| predicted protein [Populus trichocarpa] gi|2... 120 2e-25 ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ric... 115 5e-24 ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glyc... 112 6e-23 ref|XP_003596751.1| SPA1-like protein [Medicago truncatula] gi|3... 112 6e-23 >ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|222869800|gb|EEF06931.1| predicted protein [Populus trichocarpa] Length = 857 Score = 122 bits (305), Expect = 7e-26 Identities = 56/62 (90%), Positives = 61/62 (98%) Frame = -3 Query: 635 VFVYHKAFPMPVLSFKFSNTDPLSGHELEDALQFISSVCWRGQSSTLIAANSTGNIKVLE 456 VFVYHKAFPMPVLSFKF+NTDPLSGHE++DA QFISSVCWRGQSSTL+AANSTGNIK+LE Sbjct: 796 VFVYHKAFPMPVLSFKFNNTDPLSGHEMDDAAQFISSVCWRGQSSTLVAANSTGNIKILE 855 Query: 455 MV 450 MV Sbjct: 856 MV 857 >ref|XP_002316897.1| predicted protein [Populus trichocarpa] gi|222859962|gb|EEE97509.1| predicted protein [Populus trichocarpa] Length = 851 Score = 120 bits (301), Expect = 2e-25 Identities = 55/62 (88%), Positives = 60/62 (96%) Frame = -3 Query: 635 VFVYHKAFPMPVLSFKFSNTDPLSGHELEDALQFISSVCWRGQSSTLIAANSTGNIKVLE 456 VFVYHKAFPMPVLSFKF+NTDPLSGHE++D QFISSVCWRGQSSTL+AANSTGNIK+LE Sbjct: 790 VFVYHKAFPMPVLSFKFNNTDPLSGHEMDDTAQFISSVCWRGQSSTLVAANSTGNIKILE 849 Query: 455 MV 450 MV Sbjct: 850 MV 851 >ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ricinus communis] gi|223526576|gb|EEF28831.1| ubiquitin ligase protein cop1, putative [Ricinus communis] Length = 889 Score = 115 bits (289), Expect = 5e-24 Identities = 52/62 (83%), Positives = 58/62 (93%) Frame = -3 Query: 635 VFVYHKAFPMPVLSFKFSNTDPLSGHELEDALQFISSVCWRGQSSTLIAANSTGNIKVLE 456 VF+YHKAFPMP LSFKF+NTDPLSGHE++D QFISSVCWR QSSTL+AANSTGNIK+LE Sbjct: 828 VFIYHKAFPMPALSFKFNNTDPLSGHEMDDPAQFISSVCWRSQSSTLVAANSTGNIKILE 887 Query: 455 MV 450 MV Sbjct: 888 MV 889 >ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max] Length = 892 Score = 112 bits (280), Expect = 6e-23 Identities = 50/62 (80%), Positives = 58/62 (93%) Frame = -3 Query: 635 VFVYHKAFPMPVLSFKFSNTDPLSGHELEDALQFISSVCWRGQSSTLIAANSTGNIKVLE 456 VF+YHKAF MP LSFKF NTDPLSG+E++DA QF+SSVCWRGQSSTL+AANSTGN+K+LE Sbjct: 831 VFIYHKAFSMPALSFKFQNTDPLSGNEVDDAAQFVSSVCWRGQSSTLLAANSTGNVKILE 890 Query: 455 MV 450 MV Sbjct: 891 MV 892 >ref|XP_003596751.1| SPA1-like protein [Medicago truncatula] gi|355485799|gb|AES67002.1| SPA1-like protein [Medicago truncatula] Length = 875 Score = 112 bits (280), Expect = 6e-23 Identities = 50/62 (80%), Positives = 57/62 (91%) Frame = -3 Query: 635 VFVYHKAFPMPVLSFKFSNTDPLSGHELEDALQFISSVCWRGQSSTLIAANSTGNIKVLE 456 VFVYHKAFPMP L FKF NTDP+SG+E++DA QF+SSVCWRGQS TLIAANSTGN+K+LE Sbjct: 814 VFVYHKAFPMPALQFKFQNTDPISGNEVDDAAQFVSSVCWRGQSPTLIAANSTGNVKILE 873 Query: 455 MV 450 MV Sbjct: 874 MV 875