BLASTX nr result
ID: Coptis21_contig00024618
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024618 (393 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632287.1| PREDICTED: uncharacterized protein LOC100854... 94 1e-17 emb|CBI28258.3| unnamed protein product [Vitis vinifera] 94 1e-17 gb|ACN40518.1| unknown [Picea sitchensis] 93 3e-17 gb|ACG39745.1| brain acid soluble protein 1 [Zea mays] gi|219886... 91 7e-17 ref|NP_001105174.1| methyl binding domain [Zea mays] gi|13936308... 91 7e-17 >ref|XP_003632287.1| PREDICTED: uncharacterized protein LOC100854423 [Vitis vinifera] Length = 288 Score = 94.0 bits (232), Expect = 1e-17 Identities = 39/54 (72%), Positives = 50/54 (92%) Frame = +1 Query: 1 GTSRRNEIVFISPTSEEIKNKRQLEQFLRTHPGGPTLAEFDWGTGDTPRRSSRI 162 GT RRNEI+F+SPT EEIKN+ QL++FL++HPGGP+ +EFDWGTGD+PRRS+RI Sbjct: 14 GTPRRNEIIFVSPTGEEIKNRSQLDRFLKSHPGGPSCSEFDWGTGDSPRRSARI 67 >emb|CBI28258.3| unnamed protein product [Vitis vinifera] Length = 315 Score = 94.0 bits (232), Expect = 1e-17 Identities = 39/54 (72%), Positives = 50/54 (92%) Frame = +1 Query: 1 GTSRRNEIVFISPTSEEIKNKRQLEQFLRTHPGGPTLAEFDWGTGDTPRRSSRI 162 GT RRNEI+F+SPT EEIKN+ QL++FL++HPGGP+ +EFDWGTGD+PRRS+RI Sbjct: 41 GTPRRNEIIFVSPTGEEIKNRSQLDRFLKSHPGGPSCSEFDWGTGDSPRRSARI 94 >gb|ACN40518.1| unknown [Picea sitchensis] Length = 345 Score = 92.8 bits (229), Expect = 3e-17 Identities = 38/54 (70%), Positives = 48/54 (88%) Frame = +1 Query: 1 GTSRRNEIVFISPTSEEIKNKRQLEQFLRTHPGGPTLAEFDWGTGDTPRRSSRI 162 GT +RNEI+FI+PT EEIKN+RQL Q+L+ HPGGP + EF+WGTGDTPRRS+R+ Sbjct: 49 GTPKRNEIIFIAPTGEEIKNRRQLSQYLKAHPGGPDITEFEWGTGDTPRRSARL 102 >gb|ACG39745.1| brain acid soluble protein 1 [Zea mays] gi|219886197|gb|ACL53473.1| unknown [Zea mays] Length = 448 Score = 91.3 bits (225), Expect = 7e-17 Identities = 39/50 (78%), Positives = 46/50 (92%) Frame = +1 Query: 13 RNEIVFISPTSEEIKNKRQLEQFLRTHPGGPTLAEFDWGTGDTPRRSSRI 162 R+EIVF+SPT EEIKNKRQL Q+L+ HPGGP ++EFDWGTGDTPRRS+RI Sbjct: 33 RSEIVFVSPTGEEIKNKRQLSQYLKAHPGGPAVSEFDWGTGDTPRRSARI 82 >ref|NP_001105174.1| methyl binding domain [Zea mays] gi|13936308|gb|AAK40307.1| putative methyl-binding domain protein MBD105 [Zea mays] Length = 433 Score = 91.3 bits (225), Expect = 7e-17 Identities = 39/50 (78%), Positives = 46/50 (92%) Frame = +1 Query: 13 RNEIVFISPTSEEIKNKRQLEQFLRTHPGGPTLAEFDWGTGDTPRRSSRI 162 R+EIVF+SPT EEIKNKRQL Q+L+ HPGGP ++EFDWGTGDTPRRS+RI Sbjct: 18 RSEIVFVSPTGEEIKNKRQLSQYLKAHPGGPAVSEFDWGTGDTPRRSARI 67