BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024616
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263...   169   5e-40
emb|CBI36804.3| unnamed protein product [Vitis vinifera]              169   5e-40
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...   151   1e-34
gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from...   150   3e-34
gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic ...   150   3e-34

>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
          Length = 2002

 Score =  169 bits (428), Expect = 5e-40
 Identities = 96/175 (54%), Positives = 118/175 (67%), Gaps = 2/175 (1%)
 Frame = -3

Query: 519 GHVPHMESSSDQLIQK--DNRNSMKANNLSEVMTERHSEGTLMKGNEHIDSCQDISQISG 346
           G V H++   DQ   +  DN N+ K     +V  +   +G +MK  +  +  QDISQISG
Sbjct: 229 GSVSHVKPVLDQQNHEIHDNLNAKKNAFHDKVPEKTQVKGNIMKVKKCTNCSQDISQISG 288

Query: 345 PDMRSKLTPLSQTGFRDPASVGAGQQLTLMSIEVQAESRGDLRPDPRNDAVTVIAVRIQD 166
           P+ +SK TPLSQ GFRDPASVG GQQ+TL+SIE+QAESRGDLRPDPR DA+ VI + IQ+
Sbjct: 289 PEEKSKPTPLSQIGFRDPASVGGGQQVTLLSIEIQAESRGDLRPDPRYDAINVIVLLIQE 348

Query: 165 DNDLGLETFVLLRGNEGESFQRNLDAISGCTVIVVLEEKHLFYHFVKIVRSSDPD 1
           D+D  LE FVL R N  E  QR LD ISGC V+V  EEK LF  F+ I+ S DPD
Sbjct: 349 DDDSALEVFVLCRSNI-EPCQRKLDGISGCKVLVSSEEKLLFDDFINIICSFDPD 402


>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  169 bits (428), Expect = 5e-40
 Identities = 96/175 (54%), Positives = 118/175 (67%), Gaps = 2/175 (1%)
 Frame = -3

Query: 519  GHVPHMESSSDQLIQK--DNRNSMKANNLSEVMTERHSEGTLMKGNEHIDSCQDISQISG 346
            G V H++   DQ   +  DN N+ K     +V  +   +G +MK  +  +  QDISQISG
Sbjct: 815  GSVSHVKPVLDQQNHEIHDNLNAKKNAFHDKVPEKTQVKGNIMKVKKCTNCSQDISQISG 874

Query: 345  PDMRSKLTPLSQTGFRDPASVGAGQQLTLMSIEVQAESRGDLRPDPRNDAVTVIAVRIQD 166
            P+ +SK TPLSQ GFRDPASVG GQQ+TL+SIE+QAESRGDLRPDPR DA+ VI + IQ+
Sbjct: 875  PEEKSKPTPLSQIGFRDPASVGGGQQVTLLSIEIQAESRGDLRPDPRYDAINVIVLLIQE 934

Query: 165  DNDLGLETFVLLRGNEGESFQRNLDAISGCTVIVVLEEKHLFYHFVKIVRSSDPD 1
            D+D  LE FVL R N  E  QR LD ISGC V+V  EEK LF  F+ I+ S DPD
Sbjct: 935  DDDSALEVFVLCRSNI-EPCQRKLDGISGCKVLVSSEEKLLFDDFINIICSFDPD 988


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
           gi|223548348|gb|EEF49839.1| DNA polymerase zeta
           catalytic subunit, putative [Ricinus communis]
          Length = 2066

 Score =  151 bits (382), Expect = 1e-34
 Identities = 93/206 (45%), Positives = 124/206 (60%), Gaps = 10/206 (4%)
 Frame = -3

Query: 588 DDLDMIYSQEHLVNSFHEFSDKFGHVPHMESSS--------DQLIQKDNR--NSMKANNL 439
           D+ D++ S        H+ S  +G    ME  S        DQ+ Q++++  NS    N 
Sbjct: 219 DNEDVLLSIGSPETGSHDSSRVYGDNISMELRSVSNVRLIEDQVQQEEHQIINSEFHPNT 278

Query: 438 SEVMTERHSEGTLMKGNEHIDSCQDISQISGPDMRSKLTPLSQTGFRDPASVGAGQQLTL 259
            E+    H +    K N   +   D+SQISGP+ RS+ TPLSQ GFRDPAS GAGQQLT+
Sbjct: 279 DELQRPLHHKENNAKLNACTECSIDLSQISGPNERSRPTPLSQIGFRDPASTGAGQQLTM 338

Query: 258 MSIEVQAESRGDLRPDPRNDAVTVIAVRIQDDNDLGLETFVLLRGNEGESFQRNLDAISG 79
           +SIEVQAESRGDLRPDPR DA+  +A+  Q+DND  +E  VLL  N+ ES+ R+ D +S 
Sbjct: 339 LSIEVQAESRGDLRPDPRFDAINTVALAFQNDNDSTVEVQVLLHSNK-ESYARSSDGLSV 397

Query: 78  CTVIVVLEEKHLFYHFVKIVRSSDPD 1
             V+   EE HL  HF++I+ S DPD
Sbjct: 398 NKVLYFSEEVHLVTHFIRIIGSVDPD 423


>gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
            [Arabidopsis thaliana]
          Length = 1894

 Score =  150 bits (378), Expect = 3e-34
 Identities = 94/230 (40%), Positives = 131/230 (56%), Gaps = 16/230 (6%)
 Frame = -3

Query: 642  LNDGKT------ASEPPKLQSVLA------DDLDMIYSQEHLVNSFHEFSDKFGHVPHME 499
            LNDG        A  PP + SVL        D ++   ++ L ++ ++    F  +    
Sbjct: 896  LNDGSNLYLLTPAFSPPSVDSVLQWISNDKGDSNIDSEKQPLRDNHNDRGASFTDLASAS 955

Query: 498  SSSDQLIQKDNRNSMKANNLSEVMTERHSE----GTLMKGNEHIDSCQDISQISGPDMRS 331
            +        +  N++  N+ S   TE   +    GT +  N      Q++SQISGPD +S
Sbjct: 956  NVVSVSEHVEQHNNLFVNSESNAYTESEIDLKPKGTFLNLNLQASVSQELSQISGPDGKS 1015

Query: 330  KLTPLSQTGFRDPASVGAGQQLTLMSIEVQAESRGDLRPDPRNDAVTVIAVRIQDDNDLG 151
              TPLSQ GFRDPAS+GAGQQLT++SIEV AESRGDLRPDPR D+V VIA+ +Q+D+   
Sbjct: 1016 GPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDSVNVIALVVQNDDSFV 1075

Query: 150  LETFVLLRGNEGESFQRNLDAISGCTVIVVLEEKHLFYHFVKIVRSSDPD 1
             E FVLL   +    QRN+D +SGC + V LEE+ LF +F++ +   DPD
Sbjct: 1076 AEVFVLLFSPDSID-QRNVDGLSGCKLSVFLEERQLFRYFIETLCKWDPD 1124


>gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic subunit [Arabidopsis thaliana]
          Length = 1871

 Score =  150 bits (378), Expect = 3e-34
 Identities = 94/230 (40%), Positives = 131/230 (56%), Gaps = 16/230 (6%)
 Frame = -3

Query: 642  LNDGKT------ASEPPKLQSVLA------DDLDMIYSQEHLVNSFHEFSDKFGHVPHME 499
            LNDG        A  PP + SVL        D ++   ++ L ++ ++    F  +    
Sbjct: 896  LNDGSNLYLLTPAFSPPSVDSVLQWISNDKGDSNIDSEKQPLRDNHNDRGASFTDLASAS 955

Query: 498  SSSDQLIQKDNRNSMKANNLSEVMTERHSE----GTLMKGNEHIDSCQDISQISGPDMRS 331
            +        +  N++  N+ S   TE   +    GT +  N      Q++SQISGPD +S
Sbjct: 956  NVVSVSEHVEQHNNLFVNSESNAYTESEIDLKPKGTFLNLNLQASVSQELSQISGPDGKS 1015

Query: 330  KLTPLSQTGFRDPASVGAGQQLTLMSIEVQAESRGDLRPDPRNDAVTVIAVRIQDDNDLG 151
              TPLSQ GFRDPAS+GAGQQLT++SIEV AESRGDLRPDPR D+V VIA+ +Q+D+   
Sbjct: 1016 GPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDSVNVIALVVQNDDSFV 1075

Query: 150  LETFVLLRGNEGESFQRNLDAISGCTVIVVLEEKHLFYHFVKIVRSSDPD 1
             E FVLL   +    QRN+D +SGC + V LEE+ LF +F++ +   DPD
Sbjct: 1076 AEVFVLLFSPDSID-QRNVDGLSGCKLSVFLEERQLFRYFIETLCKWDPD 1124