BLASTX nr result

ID: Coptis21_contig00024606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024606
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp....   202   2e-50
ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   200   1e-49
ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [...   200   1e-49
gb|EAZ29014.1| hypothetical protein OsJ_13062 [Oryza sativa Japo...   197   7e-49
ref|NP_001051665.1| Os03g0810600 [Oryza sativa Japonica Group] g...   197   7e-49

>gb|ABR67417.1| ATP/GTP/Ca++ binding protein [Cucumis melo subsp. melo]
          Length = 647

 Score =  202 bits (514), Expect = 2e-50
 Identities = 99/155 (63%), Positives = 118/155 (76%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   IRQLQVKVPVIVVGCKLDAVEDT--TGRQEKLLLLMQEYPEIETCTECSARNLFQVSKVF 176
           +RQL+V+VPVIVVGCKLD  ++      ++ +  +MQ++ EIETC ECSA    Q+ +VF
Sbjct: 113 LRQLEVRVPVIVVGCKLDLRDENQQVSLEQVMSPIMQQFREIETCIECSAFKHIQIPEVF 172

Query: 177 YYANVAVLFPTSPLFDKKKQKLKPRCERALKRIFNLCDHDKDNTLSDTEFNDLQIKCFNV 356
           YYA  AVL PT PLFD++ Q LKPRC RALKRIF LCDHDKD  LSD E ND Q+KCFN 
Sbjct: 173 YYAQKAVLHPTGPLFDQETQTLKPRCVRALKRIFILCDHDKDGALSDAELNDFQVKCFNA 232

Query: 357 PLPPSEVVDIKRVVQDKHPEGVNDRGLTLKGFLIL 461
           PL PSE+V +KRVVQ+K PEGVNDRGLTL GFL L
Sbjct: 233 PLQPSEIVGVKRVVQEKLPEGVNDRGLTLTGFLFL 267


>ref|XP_004156425.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 648

 Score =  200 bits (508), Expect = 1e-49
 Identities = 98/155 (63%), Positives = 117/155 (75%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   IRQLQVKVPVIVVGCKLDAVEDT--TGRQEKLLLLMQEYPEIETCTECSARNLFQVSKVF 176
           +RQL+V+VPVIVVGCKLD  ++      ++ +  +MQ++ EIETC ECSA    Q+ +VF
Sbjct: 113 LRQLEVRVPVIVVGCKLDLRDEDQQVSLEQVMSPIMQQFREIETCIECSAFKHIQIPEVF 172

Query: 177 YYANVAVLFPTSPLFDKKKQKLKPRCERALKRIFNLCDHDKDNTLSDTEFNDLQIKCFNV 356
           YYA  AVL PT PLFD++ Q LKPRC RALKRIF LCDHDKD  LSD E ND Q+KCFN 
Sbjct: 173 YYAQKAVLHPTGPLFDQETQTLKPRCVRALKRIFILCDHDKDGALSDAELNDFQVKCFNA 232

Query: 357 PLPPSEVVDIKRVVQDKHPEGVNDRGLTLKGFLIL 461
           PL PSE+V +KRVVQ+K PEGVND GLTL GFL L
Sbjct: 233 PLQPSEIVGVKRVVQEKLPEGVNDHGLTLTGFLFL 267


>ref|XP_004139182.1| PREDICTED: mitochondrial Rho GTPase 1-like [Cucumis sativus]
          Length = 647

 Score =  200 bits (508), Expect = 1e-49
 Identities = 98/155 (63%), Positives = 117/155 (75%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3   IRQLQVKVPVIVVGCKLDAVEDT--TGRQEKLLLLMQEYPEIETCTECSARNLFQVSKVF 176
           +RQL+V+VPVIVVGCKLD  ++      ++ +  +MQ++ EIETC ECSA    Q+ +VF
Sbjct: 113 LRQLEVRVPVIVVGCKLDLRDEDQQVSLEQVMSPIMQQFREIETCIECSAFKHIQIPEVF 172

Query: 177 YYANVAVLFPTSPLFDKKKQKLKPRCERALKRIFNLCDHDKDNTLSDTEFNDLQIKCFNV 356
           YYA  AVL PT PLFD++ Q LKPRC RALKRIF LCDHDKD  LSD E ND Q+KCFN 
Sbjct: 173 YYAQKAVLHPTGPLFDQETQTLKPRCVRALKRIFILCDHDKDGALSDAELNDFQVKCFNA 232

Query: 357 PLPPSEVVDIKRVVQDKHPEGVNDRGLTLKGFLIL 461
           PL PSE+V +KRVVQ+K PEGVND GLTL GFL L
Sbjct: 233 PLQPSEIVGVKRVVQEKLPEGVNDHGLTLTGFLFL 267


>gb|EAZ29014.1| hypothetical protein OsJ_13062 [Oryza sativa Japonica Group]
          Length = 609

 Score =  197 bits (501), Expect = 7e-49
 Identities = 96/154 (62%), Positives = 116/154 (75%), Gaps = 1/154 (0%)
 Frame = +3

Query: 3   IRQLQVKVPVIVVGCKLDAVEDTTGRQEKLLL-LMQEYPEIETCTECSARNLFQVSKVFY 179
           +R+LQ+K PVIVVGCKLD  ++     E+++  +MQ + EIETC ECSA    QV +VFY
Sbjct: 112 LRRLQLKAPVIVVGCKLDLRDEQQVSLEQVMAPIMQTFREIETCIECSALRQIQVPEVFY 171

Query: 180 YANVAVLFPTSPLFDKKKQKLKPRCERALKRIFNLCDHDKDNTLSDTEFNDLQIKCFNVP 359
           YA  AVL PT+PLFD++ Q LKPRC RALKRIF LCDHD+D  LSD E ND Q+KCFN P
Sbjct: 172 YAQKAVLHPTAPLFDQEAQSLKPRCVRALKRIFILCDHDRDGALSDVELNDFQVKCFNAP 231

Query: 360 LPPSEVVDIKRVVQDKHPEGVNDRGLTLKGFLIL 461
           L P+E+  +KRVVQ+K PEGVND GLTL GFL L
Sbjct: 232 LQPTEIAGVKRVVQEKMPEGVNDNGLTLTGFLFL 265


>ref|NP_001051665.1| Os03g0810600 [Oryza sativa Japonica Group]
           gi|50540759|gb|AAT77915.1| expressed protein [Oryza
           sativa Japonica Group] gi|108711690|gb|ABF99485.1| small
           GTP-binding protein domain containing protein, expressed
           [Oryza sativa Japonica Group]
           gi|113550136|dbj|BAF13579.1| Os03g0810600 [Oryza sativa
           Japonica Group] gi|125546156|gb|EAY92295.1| hypothetical
           protein OsI_14016 [Oryza sativa Indica Group]
           gi|215678858|dbj|BAG95295.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 642

 Score =  197 bits (501), Expect = 7e-49
 Identities = 96/154 (62%), Positives = 116/154 (75%), Gaps = 1/154 (0%)
 Frame = +3

Query: 3   IRQLQVKVPVIVVGCKLDAVEDTTGRQEKLLL-LMQEYPEIETCTECSARNLFQVSKVFY 179
           +R+LQ+K PVIVVGCKLD  ++     E+++  +MQ + EIETC ECSA    QV +VFY
Sbjct: 112 LRRLQLKAPVIVVGCKLDLRDEQQVSLEQVMAPIMQTFREIETCIECSALRQIQVPEVFY 171

Query: 180 YANVAVLFPTSPLFDKKKQKLKPRCERALKRIFNLCDHDKDNTLSDTEFNDLQIKCFNVP 359
           YA  AVL PT+PLFD++ Q LKPRC RALKRIF LCDHD+D  LSD E ND Q+KCFN P
Sbjct: 172 YAQKAVLHPTAPLFDQEAQSLKPRCVRALKRIFILCDHDRDGALSDVELNDFQVKCFNAP 231

Query: 360 LPPSEVVDIKRVVQDKHPEGVNDRGLTLKGFLIL 461
           L P+E+  +KRVVQ+K PEGVND GLTL GFL L
Sbjct: 232 LQPTEIAGVKRVVQEKMPEGVNDNGLTLTGFLFL 265


Top