BLASTX nr result

ID: Coptis21_contig00024599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024599
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17294.3| unnamed protein product [Vitis vinifera]              135   4e-30
ref|XP_002265361.1| PREDICTED: uncharacterized protein LOC100264...   135   4e-30
ref|XP_002516381.1| Carboxy-terminal kinesin, putative [Ricinus ...   123   2e-26
ref|XP_002321106.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|XP_002303008.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23

>emb|CBI17294.3| unnamed protein product [Vitis vinifera]
          Length = 1251

 Score =  135 bits (339), Expect = 4e-30
 Identities = 64/90 (71%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1    YKQIDSLKKKHKIEINTLNQFLGESRLPKEALRP-YNDPDVVKYDVAESLGATDENWREE 177
            YKQI+ LKKKH+ EI+TLNQFL ESRLPK+AL P Y+D ++ KYD  ES  A D+ WREE
Sbjct: 1162 YKQIEKLKKKHEKEISTLNQFLAESRLPKKALTPTYDDSEMAKYDAGESHTACDQQWREE 1221

Query: 178  FEPLYPGEDGELSRLTEPSSWFSGYDRCNI 267
            FEP Y GED ELS+L EPSSWFSGYDRCNI
Sbjct: 1222 FEPFYNGEDSELSKLAEPSSWFSGYDRCNI 1251


>ref|XP_002265361.1| PREDICTED: uncharacterized protein LOC100264192 [Vitis vinifera]
          Length = 1354

 Score =  135 bits (339), Expect = 4e-30
 Identities = 64/90 (71%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1    YKQIDSLKKKHKIEINTLNQFLGESRLPKEALRP-YNDPDVVKYDVAESLGATDENWREE 177
            YKQI+ LKKKH+ EI+TLNQFL ESRLPK+AL P Y+D ++ KYD  ES  A D+ WREE
Sbjct: 1265 YKQIEKLKKKHEKEISTLNQFLAESRLPKKALTPTYDDSEMAKYDAGESHTACDQQWREE 1324

Query: 178  FEPLYPGEDGELSRLTEPSSWFSGYDRCNI 267
            FEP Y GED ELS+L EPSSWFSGYDRCNI
Sbjct: 1325 FEPFYNGEDSELSKLAEPSSWFSGYDRCNI 1354


>ref|XP_002516381.1| Carboxy-terminal kinesin, putative [Ricinus communis]
            gi|223544479|gb|EEF45998.1| Carboxy-terminal kinesin,
            putative [Ricinus communis]
          Length = 1282

 Score =  123 bits (308), Expect = 2e-26
 Identities = 61/92 (66%), Positives = 72/92 (78%), Gaps = 3/92 (3%)
 Frame = +1

Query: 1    YKQIDSLKKKHKIEINTLNQFLGESRLPKEALRP-YNDPDVVKYDVAESLGATDENWREE 177
            +K ID LK+KH+ EI+TLN+ + ESRLP+EA+RP YND +  KYD  E L +  E WREE
Sbjct: 1192 FKLIDKLKRKHESEISTLNELVAESRLPREAIRPAYNDCETAKYDTGEPL-SEGERWREE 1250

Query: 178  FEPLYP--GEDGELSRLTEPSSWFSGYDRCNI 267
            FEP Y   GEDGELS+LTEPSSWFSGYDRCNI
Sbjct: 1251 FEPFYNNNGEDGELSKLTEPSSWFSGYDRCNI 1282


>ref|XP_002321106.1| predicted protein [Populus trichocarpa] gi|222861879|gb|EEE99421.1|
            predicted protein [Populus trichocarpa]
          Length = 1289

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/90 (62%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
 Frame = +1

Query: 4    KQIDSLKKKHKIEINTLNQFLGESRLPKEALRPYNDPD--VVKYDVAESLGATDENWREE 177
            KQI+ LK+KH+ EI++L + + ESRLPKEA+RP ++ D  + KYD  E LG  D+ WREE
Sbjct: 1200 KQINKLKRKHENEISSLKELVAESRLPKEAIRPAHNDDCNMPKYDAGEPLGEGDQQWREE 1259

Query: 178  FEPLYPGEDGELSRLTEPSSWFSGYDRCNI 267
            FEP Y  +DGELS+L EPSSWFSGYDRCNI
Sbjct: 1260 FEPFYKAKDGELSKLAEPSSWFSGYDRCNI 1289


>ref|XP_002303008.1| predicted protein [Populus trichocarpa] gi|222844734|gb|EEE82281.1|
            predicted protein [Populus trichocarpa]
          Length = 1294

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/91 (61%), Positives = 68/91 (74%), Gaps = 3/91 (3%)
 Frame = +1

Query: 4    KQIDSLKKKHKIEINTLNQFLGESRLPKEALRP-YNDPDVVKYDVAESLGATDENWREEF 180
            K I+ LK+KH+ EI++L + + ESRLPKEA RP ++D D+ KYD  E L   DE WREEF
Sbjct: 1204 KHINKLKRKHEDEISSLKELVAESRLPKEARRPAHSDCDMPKYDAGEPLSEGDERWREEF 1263

Query: 181  EPLYPGED--GELSRLTEPSSWFSGYDRCNI 267
            EP Y  ED  GELS+L EPS+WFSGYDRCNI
Sbjct: 1264 EPFYNVEDGEGELSKLAEPSAWFSGYDRCNI 1294


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