BLASTX nr result

ID: Coptis21_contig00024589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024589
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20238.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002282857.1| PREDICTED: protein transport protein Sec24-l...   160   1e-37
ref|XP_002316316.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
ref|XP_002311138.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_002533043.1| Protein transport protein Sec24A, putative [...   155   2e-36

>emb|CBI20238.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score =  160 bits (405), Expect = 1e-37
 Identities = 87/150 (58%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
 Frame = +1

Query: 1    VDKYLTKEHANVDELGKILNKLPVAAKSLYSTGPYIYHDGFRLIIWFGKDLFSSIFSNLL 180
            +D+YL K  A  DEL     +LP+ A+SL S G YIY DGFR +IWFG+ L   I  NLL
Sbjct: 802  IDEYLLKPTAQADEL----KRLPLVAESLDSRGLYIYDDGFRFVIWFGRMLSPEIAMNLL 857

Query: 181  GVNSSDFI-DISKLNLSVRDNEVSRKLMKVLERVRDSDRSCYQLCHLVRQGDQPREISLL 357
            G    DF  D+SK++L   DNE+SRKLM +L++ R+SD S YQLCHLVRQG+QPRE   L
Sbjct: 858  G---QDFAADLSKVSLYEHDNEMSRKLMGILKKFRESDPSYYQLCHLVRQGEQPREGFFL 914

Query: 358  LGNLVEDKIEGTSGYIDWMLQSYRLVQQNA 447
            L NLVED+I GT+GY DW+LQ +R VQQNA
Sbjct: 915  LANLVEDQIGGTNGYADWILQIHRQVQQNA 944


>ref|XP_002282857.1| PREDICTED: protein transport protein Sec24-like At3g07100-like [Vitis
            vinifera]
          Length = 1052

 Score =  160 bits (405), Expect = 1e-37
 Identities = 87/150 (58%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
 Frame = +1

Query: 1    VDKYLTKEHANVDELGKILNKLPVAAKSLYSTGPYIYHDGFRLIIWFGKDLFSSIFSNLL 180
            +D+YL K  A  DEL     +LP+ A+SL S G YIY DGFR +IWFG+ L   I  NLL
Sbjct: 910  IDEYLLKPTAQADEL----KRLPLVAESLDSRGLYIYDDGFRFVIWFGRMLSPEIAMNLL 965

Query: 181  GVNSSDFI-DISKLNLSVRDNEVSRKLMKVLERVRDSDRSCYQLCHLVRQGDQPREISLL 357
            G    DF  D+SK++L   DNE+SRKLM +L++ R+SD S YQLCHLVRQG+QPRE   L
Sbjct: 966  G---QDFAADLSKVSLYEHDNEMSRKLMGILKKFRESDPSYYQLCHLVRQGEQPREGFFL 1022

Query: 358  LGNLVEDKIEGTSGYIDWMLQSYRLVQQNA 447
            L NLVED+I GT+GY DW+LQ +R VQQNA
Sbjct: 1023 LANLVEDQIGGTNGYADWILQIHRQVQQNA 1052


>ref|XP_002316316.1| predicted protein [Populus trichocarpa] gi|222865356|gb|EEF02487.1|
            predicted protein [Populus trichocarpa]
          Length = 1037

 Score =  159 bits (402), Expect = 2e-37
 Identities = 80/149 (53%), Positives = 107/149 (71%)
 Frame = +1

Query: 1    VDKYLTKEHANVDELGKILNKLPVAAKSLYSTGPYIYHDGFRLIIWFGKDLFSSIFSNLL 180
            VD+YL K  A  DE   I+ +LP+ ++SL S G Y+Y DGFR ++WFG+     +  NLL
Sbjct: 891  VDEYLLKPSAQADEFKNIMKRLPLTSESLDSRGLYVYDDGFRFVVWFGRMFSPDVAMNLL 950

Query: 181  GVNSSDFIDISKLNLSVRDNEVSRKLMKVLERVRDSDRSCYQLCHLVRQGDQPREISLLL 360
            G +++  ++ SK+ L   D E+SRKLM +L+++RDSD S YQLC+LVRQG+QPRE  LLL
Sbjct: 951  GQDAA--VEFSKVALGKHDTEMSRKLMGLLKKLRDSDPSYYQLCNLVRQGEQPREGYLLL 1008

Query: 361  GNLVEDKIEGTSGYIDWMLQSYRLVQQNA 447
             NLVED+I G SGY DWM+Q +R VQQNA
Sbjct: 1009 TNLVEDQIGGASGYSDWMVQIHRQVQQNA 1037


>ref|XP_002311138.1| predicted protein [Populus trichocarpa] gi|222850958|gb|EEE88505.1|
            predicted protein [Populus trichocarpa]
          Length = 1043

 Score =  156 bits (394), Expect = 2e-36
 Identities = 79/149 (53%), Positives = 105/149 (70%)
 Frame = +1

Query: 1    VDKYLTKEHANVDELGKILNKLPVAAKSLYSTGPYIYHDGFRLIIWFGKDLFSSIFSNLL 180
            VD+YL K  A  DE   I+ +LP+ A+SL S G Y+Y DGFR ++WFG+ L   +  NLL
Sbjct: 897  VDEYLLKPSAQTDEFKNIMKRLPLTAESLDSRGLYVYDDGFRFVVWFGRMLSPDLAMNLL 956

Query: 181  GVNSSDFIDISKLNLSVRDNEVSRKLMKVLERVRDSDRSCYQLCHLVRQGDQPREISLLL 360
            G +++   + SK++    D E+SRKLM VL ++R+SD S YQLC+LVRQG+QPRE   LL
Sbjct: 957  GQDAA--AEFSKVSFGKHDTEMSRKLMGVLRKLRESDPSYYQLCNLVRQGEQPREGFFLL 1014

Query: 361  GNLVEDKIEGTSGYIDWMLQSYRLVQQNA 447
             N VED+I GTSGY +WM+Q +R VQQNA
Sbjct: 1015 TNFVEDQIGGTSGYSEWMVQIHRQVQQNA 1043


>ref|XP_002533043.1| Protein transport protein Sec24A, putative [Ricinus communis]
            gi|223527181|gb|EEF29351.1| Protein transport protein
            Sec24A, putative [Ricinus communis]
          Length = 1031

 Score =  155 bits (393), Expect = 2e-36
 Identities = 78/149 (52%), Positives = 106/149 (71%)
 Frame = +1

Query: 1    VDKYLTKEHANVDELGKILNKLPVAAKSLYSTGPYIYHDGFRLIIWFGKDLFSSIFSNLL 180
            +D +L K     DE   I+ +L + A+SL S G YIY DGFR ++WFG+ L   I   LL
Sbjct: 885  IDDHLLKPSTQADEFRNIIRRLTLTAESLDSRGLYIYDDGFRFVLWFGRMLSPDIAMGLL 944

Query: 181  GVNSSDFIDISKLNLSVRDNEVSRKLMKVLERVRDSDRSCYQLCHLVRQGDQPREISLLL 360
            G +++   ++SK+ L   D E+SRKLM++L+++R+SD S YQLCHLVRQG+QPRE  LLL
Sbjct: 945  GPDAA--AELSKVTLREHDTEMSRKLMEILKKLRESDHSYYQLCHLVRQGEQPREGFLLL 1002

Query: 361  GNLVEDKIEGTSGYIDWMLQSYRLVQQNA 447
             NLVED+  GT+GY+DWM+Q +R VQQNA
Sbjct: 1003 MNLVEDQSGGTNGYVDWMVQIHRQVQQNA 1031