BLASTX nr result

ID: Coptis21_contig00024584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024584
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517677.1| receptor-kinase, putative [Ricinus communis]...    64   1e-08
ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine...    61   8e-08
gb|AEK28689.1| serine/threonine protein kinase [Populus tremula]       61   1e-07
ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine...    60   1e-07
emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]    60   1e-07

>ref|XP_002517677.1| receptor-kinase, putative [Ricinus communis]
            gi|223543309|gb|EEF44841.1| receptor-kinase, putative
            [Ricinus communis]
          Length = 2793

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
 Frame = -1

Query: 239  LASCFLIRYWKRKPKCESSCSSMKEQHLRVSSSSMKEQH--LRVSYRELFQATGGFAPTN 66
            L   FL++Y KRK   +SS SS+     R SSSS+      L++SYR+L +AT GFA  N
Sbjct: 787  LILAFLLQYSKRKSDKKSS-SSIMNYFKRSSSSSLMINRILLKLSYRDLCRATNGFASEN 845

Query: 65   ILGSGSFGCVYKGMLQQDE 9
            ++G+GSFG VYKG L Q E
Sbjct: 846  LIGTGSFGSVYKGFLDQVE 864


>ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Vitis vinifera]
          Length = 1040

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/49 (57%), Positives = 38/49 (77%)
 Frame = -1

Query: 149 SSSSMKEQHLRVSYRELFQATGGFAPTNILGSGSFGCVYKGMLQQDETI 3
           +S+S K+  L VSY  LF+ATGGF+  N++G+G FG VYKG+L QDET+
Sbjct: 690 TSASSKDLILNVSYDGLFKATGGFSSANLIGTGGFGSVYKGILGQDETV 738


>gb|AEK28689.1| serine/threonine protein kinase [Populus tremula]
          Length = 221

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/56 (50%), Positives = 41/56 (73%)
 Frame = -1

Query: 170 KEQHLRVSSSSMKEQHLRVSYRELFQATGGFAPTNILGSGSFGCVYKGMLQQDETI 3
           ++  L  S SS +E  L+VSYR L +ATGGF+  N++G+GSFG VY+G+L  +ET+
Sbjct: 75  RQSSLASSLSSKQELLLKVSYRNLHKATGGFSSANLIGAGSFGSVYRGILDPNETV 130


>ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Cucumis sativus]
          Length = 1023

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/79 (37%), Positives = 45/79 (56%)
 Frame = -1

Query: 239 LASCFLIRYWKRKPKCESSCSSMKEQHLRVSSSSMKEQHLRVSYRELFQATGGFAPTNIL 60
           L  C L+ +W RK K +S  S            S+K  +  VSY +L +AT  F+P N++
Sbjct: 669 LIICCLLFFWSRKKKNKSDLSP-----------SLKASYFAVSYNDLLKATNEFSPDNLI 717

Query: 59  GSGSFGCVYKGMLQQDETI 3
           G G +G VYKG+L QD+++
Sbjct: 718 GVGGYGSVYKGILSQDKSV 736


>emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]
          Length = 1904

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/49 (57%), Positives = 37/49 (75%)
 Frame = -1

Query: 149 SSSSMKEQHLRVSYRELFQATGGFAPTNILGSGSFGCVYKGMLQQDETI 3
           +S+S K+  L VSY  LF+ATGGF+  N++G+G FG VYKG L QDET+
Sbjct: 721 TSASSKDLILNVSYDGLFKATGGFSSANLIGTGGFGSVYKGXLGQDETV 769


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