BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024573
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat...   131   6e-29
emb|CBI23791.3| unnamed protein product [Vitis vinifera]              131   6e-29
ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat...   120   9e-26
ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containi...   120   9e-26
gb|ABR16216.1| unknown [Picea sitchensis]                              97   1e-18

>ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/100 (65%), Positives = 81/100 (81%)
 Frame = +2

Query: 2   TAMISGYTQNGLGDRALGLFEEMQREGSEVKPNGVTIMSVLPACAHAAALEQGRGIHRYA 181
           TAMISGYTQNG  ++ALGLF+EM ++GSE+KPN VTI+SVLPACA +AALE+GR IH +A
Sbjct: 282 TAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFA 341

Query: 182 SWIGLDSNTLVQTALIAMYAKCGSLVDALSCFNRLAEKDK 301
           + IGL  N+ VQTAL  MYAKC SLV+A  CF+ +A+  K
Sbjct: 342 NGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGK 381


>emb|CBI23791.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/100 (65%), Positives = 81/100 (81%)
 Frame = +2

Query: 2   TAMISGYTQNGLGDRALGLFEEMQREGSEVKPNGVTIMSVLPACAHAAALEQGRGIHRYA 181
           TAMISGYTQNG  ++ALGLF+EM ++GSE+KPN VTI+SVLPACA +AALE+GR IH +A
Sbjct: 208 TAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFA 267

Query: 182 SWIGLDSNTLVQTALIAMYAKCGSLVDALSCFNRLAEKDK 301
           + IGL  N+ VQTAL  MYAKC SLV+A  CF+ +A+  K
Sbjct: 268 NGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGK 307


>ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/100 (61%), Positives = 75/100 (75%)
 Frame = +2

Query: 2   TAMISGYTQNGLGDRALGLFEEMQREGSEVKPNGVTIMSVLPACAHAAALEQGRGIHRYA 181
           T MISGY+Q+GL  +AL LF+EM +E S V+PN VTIMSVLPACA  + LE+GR IH  A
Sbjct: 235 TTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELA 294

Query: 182 SWIGLDSNTLVQTALIAMYAKCGSLVDALSCFNRLAEKDK 301
             +GL+SN  V  AL AMYAKCGSLVDA +CF++L   +K
Sbjct: 295 CRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEK 334


>ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/100 (61%), Positives = 75/100 (75%)
 Frame = +2

Query: 2   TAMISGYTQNGLGDRALGLFEEMQREGSEVKPNGVTIMSVLPACAHAAALEQGRGIHRYA 181
           T MISGY+Q+GL  +AL LF+EM +E S V+PN VTIMSVLPACA  + LE+GR IH  A
Sbjct: 272 TTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELA 331

Query: 182 SWIGLDSNTLVQTALIAMYAKCGSLVDALSCFNRLAEKDK 301
             +GL+SN  V  AL AMYAKCGSLVDA +CF++L   +K
Sbjct: 332 CRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEK 371


>gb|ABR16216.1| unknown [Picea sitchensis]
          Length = 394

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/99 (51%), Positives = 65/99 (65%)
 Frame = +2

Query: 2   TAMISGYTQNGLGDRALGLFEEMQREGSEVKPNGVTIMSVLPACAHAAALEQGRGIHRYA 181
           TAM+SGY Q G  D AL +F EMQ  G +VK N VT+ SVLPACA  + L+QG+ IH Y 
Sbjct: 183 TAMVSGYAQGGFADEALRMFYEMQ--GEDVKANYVTVASVLPACAQLSDLQQGKEIHGYI 240

Query: 182 SWIGLDSNTLVQTALIAMYAKCGSLVDALSCFNRLAEKD 298
              GLD   +V  ALI MYAKCGS+  A   F+++ ++D
Sbjct: 241 IRRGLDLGIVVGNALIDMYAKCGSIGSAQKVFDKMLQRD 279



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/97 (38%), Positives = 58/97 (59%)
 Frame = +2

Query: 8   MISGYTQNGLGDRALGLFEEMQREGSEVKPNGVTIMSVLPACAHAAALEQGRGIHRYASW 187
           MI GY ++G    AL L+ +MQ+  S   P+  T  SVL ACA  A+L +G+ I+     
Sbjct: 83  MIGGYVKHGETREALELYHQMQKVSS-TNPDNYTYSSVLNACARLASLSEGKLIYDEIIS 141

Query: 188 IGLDSNTLVQTALIAMYAKCGSLVDALSCFNRLAEKD 298
            G + + +V+ ALI M+ KCGS+ DA   F+++ E++
Sbjct: 142 KGCEMDVIVENALINMFMKCGSIEDARRVFDKMCERN 178



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/76 (47%), Positives = 48/76 (63%)
 Frame = +2

Query: 8   MISGYTQNGLGDRALGLFEEMQREGSEVKPNGVTIMSVLPACAHAAALEQGRGIHRYASW 187
           +I+ Y QNG GD+ L LF++MQ  G  VKPN +TI SVL ACA  +AL++G+ IH   + 
Sbjct: 321 LITAYAQNGYGDQTLELFQQMQLRG--VKPNSITIASVLSACAAVSALQEGKRIHDLVNR 378

Query: 188 IGLDSNTLVQTALIAM 235
               S+  V  ALI M
Sbjct: 379 SECKSDICVGNALIDM 394