BLASTX nr result

ID: Coptis21_contig00024568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024568
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516809.1| Transmembrane BAX inhibitor motif-containing...    79   4e-13
ref|XP_002279368.2| PREDICTED: BI1-like protein-like [Vitis vini...    77   1e-12
ref|XP_002312729.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
ref|XP_002314428.1| predicted protein [Populus trichocarpa] gi|1...    75   7e-12
gb|AFK46458.1| unknown [Medicago truncatula]                           74   9e-12

>ref|XP_002516809.1| Transmembrane BAX inhibitor motif-containing protein, putative
           [Ricinus communis] gi|223543897|gb|EEF45423.1|
           Transmembrane BAX inhibitor motif-containing protein,
           putative [Ricinus communis]
          Length = 210

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/80 (51%), Positives = 49/80 (61%)
 Frame = +3

Query: 3   TVLYTPLNHXXXXXXXXXXXXXXXXXXXXXXXTIYHQKHPVNFILLGLFTICMSVTIGVV 182
           TVLYTP N                         +YHQKHPVN I+LGLFT+ +S+ +GV 
Sbjct: 61  TVLYTPFNTLLGDSPGLLLLLCIVPFVLLWPLHVYHQKHPVNLIVLGLFTVSLSLLVGVS 120

Query: 183 CAKTEAKIVLEALILTSAVV 242
           CA+T+ KIVLEALILTSAVV
Sbjct: 121 CAQTDGKIVLEALILTSAVV 140


>ref|XP_002279368.2| PREDICTED: BI1-like protein-like [Vitis vinifera]
           gi|297736960|emb|CBI26161.3| unnamed protein product
           [Vitis vinifera]
          Length = 241

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/81 (49%), Positives = 50/81 (61%)
 Frame = +3

Query: 3   TVLYTPLNHXXXXXXXXXXXXXXXXXXXXXXXTIYHQKHPVNFILLGLFTICMSVTIGVV 182
           TVLY+PLN                         +Y Q+HP+N I LGLFT+ MS+T+GV 
Sbjct: 55  TVLYSPLNLLLRGNSGLLLFLIFLPFILLWPLHVYQQRHPLNLIFLGLFTVSMSLTVGVS 114

Query: 183 CAKTEAKIVLEALILTSAVVA 245
           CAKT+ +IVLEALILTSAVV+
Sbjct: 115 CAKTDGRIVLEALILTSAVVS 135


>ref|XP_002312729.1| predicted protein [Populus trichocarpa] gi|222852549|gb|EEE90096.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 39/80 (48%), Positives = 46/80 (57%)
 Frame = +3

Query: 3   TVLYTPLNHXXXXXXXXXXXXXXXXXXXXXXXTIYHQKHPVNFILLGLFTICMSVTIGVV 182
           TVLYTP+                          +YHQKHPVN I+LGLFT+ +S+ +G  
Sbjct: 67  TVLYTPITDLLRGSFGFVMLLSIVPFILLWPLHVYHQKHPVNLIILGLFTVSLSLLVGAS 126

Query: 183 CAKTEAKIVLEALILTSAVV 242
           CA  E KIVLEALILTSAVV
Sbjct: 127 CANIEGKIVLEALILTSAVV 146


>ref|XP_002314428.1| predicted protein [Populus trichocarpa] gi|118486297|gb|ABK94990.1|
           unknown [Populus trichocarpa]
           gi|222863468|gb|EEF00599.1| predicted protein [Populus
           trichocarpa]
          Length = 248

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/80 (47%), Positives = 46/80 (57%)
 Frame = +3

Query: 3   TVLYTPLNHXXXXXXXXXXXXXXXXXXXXXXXTIYHQKHPVNFILLGLFTICMSVTIGVV 182
           T+LYTP+                          +YHQKHPVN I+LGLFT+ +S+ +G  
Sbjct: 63  TILYTPMTDLLKGSFGFVLFLSIVPFILLWPLHVYHQKHPVNLIILGLFTVSLSLLVGAS 122

Query: 183 CAKTEAKIVLEALILTSAVV 242
           CA  E KIVLEALILTSAVV
Sbjct: 123 CANIEGKIVLEALILTSAVV 142


>gb|AFK46458.1| unknown [Medicago truncatula]
          Length = 257

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/81 (49%), Positives = 47/81 (58%)
 Frame = +3

Query: 3   TVLYTPLNHXXXXXXXXXXXXXXXXXXXXXXXTIYHQKHPVNFILLGLFTICMSVTIGVV 182
           TV YTPLN                          Y QKHP N+ILLGLFT+ +S T+GV 
Sbjct: 72  TVFYTPLNLLLRGNSPLLLFLVFLPFIFLIPLLRYQQKHPHNYILLGLFTLSISFTVGVT 131

Query: 183 CAKTEAKIVLEALILTSAVVA 245
           CA T+ KIVLEAL+LTSAVV+
Sbjct: 132 CANTDGKIVLEALVLTSAVVS 152


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