BLASTX nr result

ID: Coptis21_contig00024567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024567
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263580.1| PREDICTED: (-)-germacrene D synthase [Vitis ...   179   5e-43
emb|CAN83470.1| hypothetical protein VITISV_030783 [Vitis vinifera]   175   7e-42
ref|XP_003634696.1| PREDICTED: (-)-germacrene D synthase [Vitis ...   174   2e-41
emb|CAN68620.1| hypothetical protein VITISV_013313 [Vitis vinifera]   174   2e-41
ref|XP_003634948.1| PREDICTED: LOW QUALITY PROTEIN: valencene sy...   173   3e-41

>ref|XP_002263580.1| PREDICTED: (-)-germacrene D synthase [Vitis vinifera]
          Length = 560

 Score =  179 bits (454), Expect = 5e-43
 Identities = 86/205 (41%), Positives = 126/205 (61%)
 Frame = +1

Query: 1   NVVNEIEEEMIKRGQFNAMPYLKQEIKDYTRDLLVEAKLIYSGHFPTVEEWLPISAATGA 180
           +V NEIEE  +K G+     Y K+ +K+  R    EAK ++    PT+EE++ ++  T  
Sbjct: 356 DVYNEIEEVTVKAGRSYRAHYAKEAMKNQVRAYFAEAKWLFLRQMPTIEEYMSVALPTSG 415

Query: 181 LSIFIVDAVMNMGDIATKDIFDWIASDPKIMNCSYYICRLLGDVGTFKVEQERGVFLSNV 360
             +    + + M ++ TKD F+W+ SDPKI+  S  ICRL+ D+   K EQ+RG   S V
Sbjct: 416 YQLLATTSFIGMENMVTKDTFEWVFSDPKIVRASSTICRLMNDMVPHKFEQKRGHVPSAV 475

Query: 361 TCYMKEHGVSESKAIECIQQKAMTIWKDMNQECLRPNPVPRQVLRMAYNLSRIMLVYYSD 540
            CYMK+HGVSE + ++ +  +    WKDMNQECL P  VP  ++    NL+R + V Y D
Sbjct: 476 ECYMKQHGVSEQQTLDELHNQVRDAWKDMNQECLSPTAVPMPIIMRVLNLARFIDVVYKD 535

Query: 541 GDGYTHSKGHTQEIIASLLINPIPI 615
            DGYTHS+   +++IASLLI+P+PI
Sbjct: 536 EDGYTHSETVLKDLIASLLIHPVPI 560


>emb|CAN83470.1| hypothetical protein VITISV_030783 [Vitis vinifera]
          Length = 557

 Score =  175 bits (444), Expect = 7e-42
 Identities = 85/204 (41%), Positives = 125/204 (61%)
 Frame = +1

Query: 4   VVNEIEEEMIKRGQFNAMPYLKQEIKDYTRDLLVEAKLIYSGHFPTVEEWLPISAATGAL 183
           V +EIEEEM K G+   + Y K+ +K+  R    EAK +     PT+EE++P++  T A 
Sbjct: 354 VYSEIEEEMAKEGRSYRLYYAKEAMKNQVRAYYEEAKWLQVQQIPTMEEYMPVALVTSAY 413

Query: 184 SIFIVDAVMNMGDIATKDIFDWIASDPKIMNCSYYICRLLGDVGTFKVEQERGVFLSNVT 363
           S+    +++ MGD  TK+ FDWI S PKI+  S  +CRL+ D+ + K EQ+RG   S V 
Sbjct: 414 SMLATTSLVGMGDAVTKETFDWIFSKPKIVRASAIVCRLMDDMVSHKFEQKRGHVASAVE 473

Query: 364 CYMKEHGVSESKAIECIQQKAMTIWKDMNQECLRPNPVPRQVLRMAYNLSRIMLVYYSDG 543
           CYMK+HG SE +      ++    WKD+N+ECL P  VP  +L    NL+R++ V Y + 
Sbjct: 474 CYMKQHGASEQETHNEFNKQVRDAWKDINEECLIPTAVPMPILMRVLNLARVIDVIYKNE 533

Query: 544 DGYTHSKGHTQEIIASLLINPIPI 615
           DGYTHS    ++ + S+LI+P+PI
Sbjct: 534 DGYTHSGTVLKDFVTSMLIDPVPI 557


>ref|XP_003634696.1| PREDICTED: (-)-germacrene D synthase [Vitis vinifera]
           gi|302143188|emb|CBI20483.3| unnamed protein product
           [Vitis vinifera]
          Length = 557

 Score =  174 bits (441), Expect = 2e-41
 Identities = 85/204 (41%), Positives = 124/204 (60%)
 Frame = +1

Query: 4   VVNEIEEEMIKRGQFNAMPYLKQEIKDYTRDLLVEAKLIYSGHFPTVEEWLPISAATGAL 183
           V +EIEEEM K G+   + Y K+ +K+  R    EAK +     PT+EE++P++  T A 
Sbjct: 354 VYSEIEEEMAKEGRSYRLYYAKEAMKNQVRAYYEEAKWLQVQQIPTMEEYMPVALVTSAY 413

Query: 184 SIFIVDAVMNMGDIATKDIFDWIASDPKIMNCSYYICRLLGDVGTFKVEQERGVFLSNVT 363
           S+    + + MGD  TK+ FDWI S PKI+  S  +CRL+ D+ + K EQ+RG   S V 
Sbjct: 414 SMLATTSFVGMGDAVTKESFDWIFSKPKIVRASAIVCRLMDDMVSHKFEQKRGHVASAVE 473

Query: 364 CYMKEHGVSESKAIECIQQKAMTIWKDMNQECLRPNPVPRQVLRMAYNLSRIMLVYYSDG 543
           CYMK+HG SE +      ++    WKD+N+ECL P  VP  +L    NL+R++ V Y + 
Sbjct: 474 CYMKQHGASEQETHNEFHKQVRDAWKDINEECLIPTAVPMPILMRVLNLARVIDVIYKNE 533

Query: 544 DGYTHSKGHTQEIIASLLINPIPI 615
           DGYTHS    ++ + S+LI+P+PI
Sbjct: 534 DGYTHSGTVLKDFVTSMLIDPVPI 557


>emb|CAN68620.1| hypothetical protein VITISV_013313 [Vitis vinifera]
          Length = 557

 Score =  174 bits (441), Expect = 2e-41
 Identities = 85/204 (41%), Positives = 124/204 (60%)
 Frame = +1

Query: 4   VVNEIEEEMIKRGQFNAMPYLKQEIKDYTRDLLVEAKLIYSGHFPTVEEWLPISAATGAL 183
           V +EIEEEM K G+   + Y K+ +K+  R    EAK +     PT+EE++P++  T A 
Sbjct: 354 VYSEIEEEMAKEGRSYRLYYAKEAMKNQVRAYYEEAKWLQVQQIPTMEEYMPVALVTSAY 413

Query: 184 SIFIVDAVMNMGDIATKDIFDWIASDPKIMNCSYYICRLLGDVGTFKVEQERGVFLSNVT 363
           S+    + + MGD  TK+ FDWI S PKI+  S  +CRL+ D+ + K EQ+RG   S V 
Sbjct: 414 SMLATTSFVGMGDAVTKESFDWIFSKPKIVRASAIVCRLMDDMVSHKFEQKRGHVASAVE 473

Query: 364 CYMKEHGVSESKAIECIQQKAMTIWKDMNQECLRPNPVPRQVLRMAYNLSRIMLVYYSDG 543
           CYMK+HG SE +      ++    WKD+N+ECL P  VP  +L    NL+R++ V Y + 
Sbjct: 474 CYMKQHGASEQETHNEFNKQVRDAWKDINEECLIPTAVPMPILMRVLNLARVIDVIYKNE 533

Query: 544 DGYTHSKGHTQEIIASLLINPIPI 615
           DGYTHS    ++ + S+LI+P+PI
Sbjct: 534 DGYTHSGTVLKDFVTSMLIDPVPI 557


>ref|XP_003634948.1| PREDICTED: LOW QUALITY PROTEIN: valencene synthase [Vitis vinifera]
          Length = 556

 Score =  173 bits (438), Expect = 3e-41
 Identities = 85/203 (41%), Positives = 127/203 (62%)
 Frame = +1

Query: 1   NVVNEIEEEMIKRGQFNAMPYLKQEIKDYTRDLLVEAKLIYSGHFPTVEEWLPISAATGA 180
           +V  EIEEEM K G    + Y K+ +K+  R    EAK ++  H PT+E+++ ++  +  
Sbjct: 353 DVYKEIEEEMEKEGNQYRVHYAKEVMKNQVRAYFAEAKWLHEEHVPTIEDYMRVALVSSG 412

Query: 181 LSIFIVDAVMNMGDIATKDIFDWIASDPKIMNCSYYICRLLGDVGTFKVEQERGVFLSNV 360
             + +  +++ MG+IATK+ FDW+ SDPKIM+ S +I RL+ D+ + K EQ+RG   S V
Sbjct: 413 YCMLVTTSLVGMGEIATKEAFDWMTSDPKIMSSSNFIARLMDDIKSHKFEQKRGHVASGV 472

Query: 361 TCYMKEHGVSESKAIECIQQKAMTIWKDMNQECLRPNPVPRQVLRMAYNLSRIMLVYYSD 540
            CYMK++G SE +  +  Q++     KD+N+E LRP  VP  +L    NLSR+M V Y+ 
Sbjct: 473 ECYMKQYGASEEEVYDKFQKQVEDACKDINEEFLRPTAVPMPLLMRVLNLSRVMYVIYTG 532

Query: 541 GDGYTHSKGHTQEIIASLLINPI 609
           GDGYTH     +  +ASLLI+PI
Sbjct: 533 GDGYTHVGKVMKNNVASLLIHPI 555


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