BLASTX nr result

ID: Coptis21_contig00024559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024559
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272061.2| PREDICTED: uncharacterized protein LOC100249...   161   6e-38
emb|CBI27461.3| unnamed protein product [Vitis vinifera]              161   6e-38
ref|XP_002515796.1| conserved hypothetical protein [Ricinus comm...   146   1e-33
dbj|BAB01301.1| unnamed protein product [Arabidopsis thaliana]        139   3e-31
ref|NP_188621.2| uncharacterized protein [Arabidopsis thaliana] ...   139   3e-31

>ref|XP_002272061.2| PREDICTED: uncharacterized protein LOC100249600 [Vitis vinifera]
          Length = 1099

 Score =  161 bits (407), Expect = 6e-38
 Identities = 81/127 (63%), Positives = 92/127 (72%)
 Frame = +3

Query: 3   DLQASLLKVQFSGLLYSYDPMLCHIVLMLYSHFSDSFDGQEGEIVRRLVLISKEVQQHLV 182
           +LQAS+LKVQFSGLLYSYDPMLCH+VLM+YS F D+FDGQE  I RRLVLIS+E Q  LV
Sbjct: 254 ELQASMLKVQFSGLLYSYDPMLCHVVLMIYSRFVDAFDGQEASIARRLVLISREAQLPLV 313

Query: 183 FRLLALHWLFGFXXXXXXXXXXXXXXXXXXXXXXFYPTVFDPLALKSMKLDLLAYCAVCL 362
           FRLLALHWL GF                      FYP+VFDPLALKS+KLDLLA CA+CL
Sbjct: 314 FRLLALHWLLGFIGLVPDSGGRKKQSIVEIGLGFFYPSVFDPLALKSLKLDLLASCAICL 373

Query: 363 ATSNLDD 383
            T + D+
Sbjct: 374 NTLSADN 380


>emb|CBI27461.3| unnamed protein product [Vitis vinifera]
          Length = 1125

 Score =  161 bits (407), Expect = 6e-38
 Identities = 81/127 (63%), Positives = 92/127 (72%)
 Frame = +3

Query: 3   DLQASLLKVQFSGLLYSYDPMLCHIVLMLYSHFSDSFDGQEGEIVRRLVLISKEVQQHLV 182
           +LQAS+LKVQFSGLLYSYDPMLCH+VLM+YS F D+FDGQE  I RRLVLIS+E Q  LV
Sbjct: 280 ELQASMLKVQFSGLLYSYDPMLCHVVLMIYSRFVDAFDGQEASIARRLVLISREAQLPLV 339

Query: 183 FRLLALHWLFGFXXXXXXXXXXXXXXXXXXXXXXFYPTVFDPLALKSMKLDLLAYCAVCL 362
           FRLLALHWL GF                      FYP+VFDPLALKS+KLDLLA CA+CL
Sbjct: 340 FRLLALHWLLGFIGLVPDSGGRKKQSIVEIGLGFFYPSVFDPLALKSLKLDLLASCAICL 399

Query: 363 ATSNLDD 383
            T + D+
Sbjct: 400 NTLSADN 406


>ref|XP_002515796.1| conserved hypothetical protein [Ricinus communis]
           gi|223545065|gb|EEF46577.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1113

 Score =  146 bits (369), Expect = 1e-33
 Identities = 71/126 (56%), Positives = 90/126 (71%)
 Frame = +3

Query: 3   DLQASLLKVQFSGLLYSYDPMLCHIVLMLYSHFSDSFDGQEGEIVRRLVLISKEVQQHLV 182
           +LQ SLLKVQF GL+YS+DP+LCH+VL+++S F D+FDGQEGEIV+RL+LISKE Q +LV
Sbjct: 268 ELQVSLLKVQFFGLIYSFDPLLCHLVLVMFSKFLDAFDGQEGEIVKRLMLISKETQHYLV 327

Query: 183 FRLLALHWLFGFXXXXXXXXXXXXXXXXXXXXXXFYPTVFDPLALKSMKLDLLAYCAVCL 362
           FRLL+LHWL G                       FYP VFDPLALK++KLDLLA+ ++CL
Sbjct: 328 FRLLSLHWLMGLLSRLVLSKEGKKYKSVVKMGLRFYPAVFDPLALKALKLDLLAFFSICL 387

Query: 363 ATSNLD 380
               L+
Sbjct: 388 DMLKLE 393


>dbj|BAB01301.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1117

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/118 (56%), Positives = 84/118 (71%)
 Frame = +3

Query: 3   DLQASLLKVQFSGLLYSYDPMLCHIVLMLYSHFSDSFDGQEGEIVRRLVLISKEVQQHLV 182
           +LQAS+LKVQF G++YS+DPMLCH+VL++YS F D+F+GQE EI+RRL+L SKE Q +LV
Sbjct: 283 ELQASMLKVQFLGMIYSFDPMLCHVVLLMYSRFPDAFEGQEKEIMRRLMLFSKETQIYLV 342

Query: 183 FRLLALHWLFGFXXXXXXXXXXXXXXXXXXXXXXFYPTVFDPLALKSMKLDLLAYCAV 356
           FRLLALHWL G                       F+P VFDPLALK++KLDLL  C+V
Sbjct: 343 FRLLALHWLMGLLNKHMLSGELEKRTSVLEMGQKFHPVVFDPLALKALKLDLLVQCSV 400


>ref|NP_188621.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332642781|gb|AEE76302.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 1090

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/118 (56%), Positives = 84/118 (71%)
 Frame = +3

Query: 3   DLQASLLKVQFSGLLYSYDPMLCHIVLMLYSHFSDSFDGQEGEIVRRLVLISKEVQQHLV 182
           +LQAS+LKVQF G++YS+DPMLCH+VL++YS F D+F+GQE EI+RRL+L SKE Q +LV
Sbjct: 256 ELQASMLKVQFLGMIYSFDPMLCHVVLLMYSRFPDAFEGQEKEIMRRLMLFSKETQIYLV 315

Query: 183 FRLLALHWLFGFXXXXXXXXXXXXXXXXXXXXXXFYPTVFDPLALKSMKLDLLAYCAV 356
           FRLLALHWL G                       F+P VFDPLALK++KLDLL  C+V
Sbjct: 316 FRLLALHWLMGLLNKHMLSGELEKRTSVLEMGQKFHPVVFDPLALKALKLDLLVQCSV 373


Top