BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024541
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518046.1| ubiquitin-protein ligase, putative [Ricinus ...    59   5e-07
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    57   1e-06
ref|XP_003621771.1| F-box family protein [Medicago truncatula] g...    57   2e-06
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    57   2e-06

>ref|XP_002518046.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223542642|gb|EEF44179.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 257

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 24/48 (50%), Positives = 38/48 (79%), Gaps = 3/48 (6%)
 Frame = -1

Query: 290 MDRLPCEIVSDILSRLPIKPLVHSRCVCKTWCTIISDPSF---QLNRA 156
           M +LP +++++ILSR+P+KPL+  +C+CKTW ++IS+P F   QL RA
Sbjct: 1   MSKLPQDLITEILSRVPVKPLIRFKCICKTWNSLISNPEFAKLQLKRA 48


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/53 (50%), Positives = 35/53 (66%)
 Frame = -1

Query: 296 KSMDRLPCEIVSDILSRLPIKPLVHSRCVCKTWCTIISDPSFQLNRAANTDPD 138
           K + +LP EI+S+ILSRLP+K LV  +CV KTW ++IS P F  N    T  D
Sbjct: 3   KKIPKLPSEIISEILSRLPVKCLVRFKCVSKTWRSLISHPEFVKNHLKRTKED 55


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 39/101 (38%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
 Frame = -1

Query: 290 MDRLPCEIVSDILSRLPIKPLVHSRCVCKTWCTIISDPSF-QLNRAANTD----PDLILH 126
           M+ LP EI  DILSRLPI  LV  +CVC+ W  ++ DP    L  + +T     P LILH
Sbjct: 25  MELLPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILH 84

Query: 125 CKPLCQRNKIFFAEKNHQTIILKPKIIDVSLFDSMSLSYEI 3
           C    + N  F     H+    K K I    F SM   +E+
Sbjct: 85  CDFPIRNNLYFVDFAAHEEEKEKVKRIPAP-FSSMMPEFEV 124


>ref|XP_003621771.1| F-box family protein [Medicago truncatula]
           gi|355496786|gb|AES77989.1| F-box family protein
           [Medicago truncatula]
          Length = 524

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/48 (54%), Positives = 37/48 (77%), Gaps = 3/48 (6%)
 Frame = -1

Query: 287 DRLPCEIVSDILSRLPIKPLVHSRCVCKTWCTIISDPSF---QLNRAA 153
           + LP E++++ILSRLP++ L+  +CVCK+W TIISDP F    LNR+A
Sbjct: 92  ETLPDEVMAEILSRLPVRSLMQIKCVCKSWNTIISDPKFIKMHLNRSA 139


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/100 (38%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
 Frame = -1

Query: 290 MDRLPCEIVSDILSRLPIKPLVHSRCVCKTWCTIISDPS----FQLNRAANTDPDLILHC 123
           M+ LP EI  DILSRLPI  LV  +CVC+ W  +  DP     +       TDP +ILHC
Sbjct: 25  MELLPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQETDPCVILHC 84

Query: 122 KPLCQRNKIFFAEKNHQTIILKPKIIDVSLFDSMSLSYEI 3
               + N  F     H+    K K I    F SM   +E+
Sbjct: 85  DFPIRNNLYFVDFAAHEEEKEKVKRIRAP-FSSMMPEFEV 123