BLASTX nr result

ID: Coptis21_contig00024529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024529
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADA70358.1| mitotic cyclin B1 [Persea americana]                   156   2e-36
dbj|BAA20425.1| B-type cyclin [Nicotiana tabacum]                     155   2e-36
gb|ACH78335.1| cyclin B1 [Phalaenopsis bellina]                       154   9e-36
ref|XP_002523233.1| cyclin B, putative [Ricinus communis] gi|223...   153   2e-35
dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]                   152   2e-35

>gb|ADA70358.1| mitotic cyclin B1 [Persea americana]
          Length = 445

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/101 (74%), Positives = 88/101 (87%)
 Frame = -3

Query: 305 YLTVHIVDQYLSMRSVSRKILQLIGMSAMLIASKYEEIWAPEVNDFVCIANNAYDRAQIL 126
           YLTVHI+DQYLSMR+V R+ LQL+G+SAMLIASKYEEIWAPE+NDFVCI + AY R  IL
Sbjct: 239 YLTVHIIDQYLSMRTVLRRELQLVGVSAMLIASKYEEIWAPEINDFVCITDMAYTREGIL 298

Query: 125 AMEKLILGKLEWSLTVPTPYVFLVRYIKAVVSDQEMENMIF 3
            MEK IL +L WSLTVPTPYVFLVR++KA  SD+EME+M+F
Sbjct: 299 RMEKSILNELAWSLTVPTPYVFLVRFLKAAKSDKEMEDMVF 339


>dbj|BAA20425.1| B-type cyclin [Nicotiana tabacum]
          Length = 446

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/101 (72%), Positives = 89/101 (88%)
 Frame = -3

Query: 305 YLTVHIVDQYLSMRSVSRKILQLIGMSAMLIASKYEEIWAPEVNDFVCIANNAYDRAQIL 126
           YLT++IVD+YL++ + SR+ LQL+GMSAMLIASKYEEIWAPEVNDFVCI++ AY   Q+L
Sbjct: 243 YLTINIVDRYLAVTTTSRRELQLVGMSAMLIASKYEEIWAPEVNDFVCISDKAYSHEQVL 302

Query: 125 AMEKLILGKLEWSLTVPTPYVFLVRYIKAVVSDQEMENMIF 3
            MEK ILG+LEW LTVPTPYVFLVRYIKA VS+ +MENM++
Sbjct: 303 GMEKRILGQLEWYLTVPTPYVFLVRYIKAAVSNAQMENMVY 343


>gb|ACH78335.1| cyclin B1 [Phalaenopsis bellina]
          Length = 427

 Score =  154 bits (388), Expect = 9e-36
 Identities = 72/101 (71%), Positives = 88/101 (87%)
 Frame = -3

Query: 305 YLTVHIVDQYLSMRSVSRKILQLIGMSAMLIASKYEEIWAPEVNDFVCIANNAYDRAQIL 126
           YLT+ I+D++LSM SV RK+LQL+G+SAMLIASKYEEIWAPEVNDF+CI++ AY R QIL
Sbjct: 223 YLTMFIIDRFLSMESVHRKVLQLVGISAMLIASKYEEIWAPEVNDFICISDRAYTREQIL 282

Query: 125 AMEKLILGKLEWSLTVPTPYVFLVRYIKAVVSDQEMENMIF 3
            MEK IL KL+W LT PTPYVF+VR++KA VSD+EME+M F
Sbjct: 283 RMEKEILNKLDWKLTFPTPYVFVVRFLKAAVSDKEMEHMTF 323


>ref|XP_002523233.1| cyclin B, putative [Ricinus communis] gi|223537529|gb|EEF39154.1|
           cyclin B, putative [Ricinus communis]
          Length = 390

 Score =  153 bits (386), Expect = 2e-35
 Identities = 72/102 (70%), Positives = 92/102 (90%), Gaps = 1/102 (0%)
 Frame = -3

Query: 305 YLTVHIVDQYLSMRSVSRKILQLIGMSAMLIASKYEEIWAPEVNDFVCIANNAYDRAQIL 126
           YLT++I+D++L++++V R+ LQL+G+S+MLIA KYEEIWAPEVNDF+CI++NAY R Q+L
Sbjct: 234 YLTINIIDRFLAVKAVPRRELQLVGISSMLIACKYEEIWAPEVNDFICISDNAYIREQVL 293

Query: 125 AMEKLILGKLEWSLTVPTPYVFLVRYIKA-VVSDQEMENMIF 3
           AMEK ILGKLEW LTVPTPYVFLVRYIKA   +D+EMENM+F
Sbjct: 294 AMEKAILGKLEWYLTVPTPYVFLVRYIKASAPADKEMENMVF 335


>dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]
          Length = 436

 Score =  152 bits (385), Expect = 2e-35
 Identities = 72/101 (71%), Positives = 87/101 (86%)
 Frame = -3

Query: 305 YLTVHIVDQYLSMRSVSRKILQLIGMSAMLIASKYEEIWAPEVNDFVCIANNAYDRAQIL 126
           YLT++IVD+YL++++  RK LQL+GMSAMLIASKYEEIWAPEVNDFVCI++ AY   Q+L
Sbjct: 237 YLTINIVDRYLAVQTTLRKELQLVGMSAMLIASKYEEIWAPEVNDFVCISDRAYSHQQVL 296

Query: 125 AMEKLILGKLEWSLTVPTPYVFLVRYIKAVVSDQEMENMIF 3
            MEK ILG LEW+LTVPTPYVFLVR+IKA V D  MENM++
Sbjct: 297 VMEKRILGGLEWNLTVPTPYVFLVRFIKASVPDSNMENMVY 337


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